Silkworm Genome Informatics Database

Gene

KWMTBOMO09806

Pre Gene Modal

BGIBMGA013147

Annotation

PREDICTED:_MOG_interacting_and_ectopic_P-granules_protein_1-like_[Amyelois_transitella]

Location

Bomo_Chr16(-):9639869-9643868 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.691

CDS

ATGTCGATTTCTACTGCTACAGATGAACGCACAGAAGGTGATGATGACACCTCACAAGGAAGCCACCCAAAAGAAGACAGTAGTGACTCTGAAAATGAGACTGAGCCTCAAAATCAAAATGGAGGCTCTCCCGCACCAGAAGTTCATGAAATTACTAGTGATGATGATGAGGAAGAGGGGGGTGTAACAAATGAAGATGATTCCTCCAACTCAAGTACAGTAAGTAATGATAGTTCAGAAGGATCCCAACACAGTAGTAAGGAAACAGAGAAGAAAGACATTGAACATTTAGAAGAGAATGGTGCTGATGAGTCTGATATTGAAGAAATTGCTATGGAGGATCCATTAAACCAAACACAAAGCATTAACAAACCTATTGTGATAAATGATACAAAGTGTTTGGTCAACTTAGCTTCTAAACAGACTAAACCAAATGGGGATCAGAATAAAGAGCCTACAGTTGTTATTATTGATACAAATTCAATACTTGCTGGCAAAGGGCCTCTCCCGTTGCAAAGCAAAATGCATACAACTACTACTACTAGTATGATGGATCAACAGGACTTGTGCCAAAGCATTGCTGCTCGGGGCACTACTATCACACCAGTTAGTAATAAGACTGCAAATCAGAACAGTGCTCATAATAGTACTCCTGCAGCTCCACCTCCCAACATACTGCCATCTCTCACAGATGATATGTTTGTTGTTGAAGCACCATCCTTCATTGTTCCATATGTTTATGAGAAACCTTCTCTAAAGCCTTTTAGAGAATTTGTGGACAAGCTTGGTAAAGAGCTTGAAGAACTCAAAATTAAAGAAGAACAGGAAAAAGCAGAGAAGGAAAAGATTGAGAGGGAAAGGAGAGATAAAGAGAGGAAGGAAAGAATTGAAAGAGGAGAAATAGAGGAAGATGATGAGGTTAAGGAGTCCAGAAAACTAGAAGTTGCACAAAAGAAAGAGAAAAAACAAGGATGGAAACGCACTGATGATGATGATGATGATTCTTGGGACGGTGAATCATCCTCTGAGTCAGAGGAAGAAGCTCTCAGTGATGATGATGCTGTAGTAATTAAAGAAAAAGAGGACAGTGACACCACCGACCCAATCAGCCTTATTGCCAAAAGCCTTTCAAGTGGAAAGCCAGACAGTTACTTTGATTGTTCATTAGGACAATTTTTTATTAACATTGGACTGAATTTAGTGCAAGAGTATGTTCAAACTGATTTATTAAAGCAACAACAGCGCAAGCTCTATAAAGAGAAGAAATCAGGACGCAGTACCAAGTCAACGGAGGCTGCAATTGCATCTTTGTCTCAGAACTTAGATTTCAGCAAGAAAACAAATGCACCATTTGCTCTTTCACACAGAAGGTGTGATTTTTGTAGTTTTAAAACTGAATCTATGTTAGTTATGGCTCATCACCTTGAAGCACCTCACATGAGAAGTAACATATACAAGTGTAATTCATGTGAGTTTGAAATACGAAGTCCTCATGATATATTGTTCCATATGGAGGCAGAACACAATATTAGGGGCAGATTGGAACGGGCTCCTGCATACCAGCAATGTGCTAACTGTCATTTTGAAGACAACAGTAAAACAAAACTGGCTCGACATTTGATTGCTTGTGCTAAAAAATTCAAGCCAGAATTTAACTTAGGACCTCCTCTAGAATGGGAACCCCCAGCAAAAATACCAAAGTTAACCAGAGCACGCAATAATATGATGAGTTCTTACCAATCAAATTATAATAGACCTAATATGAATAACATGGGCAGGCCTCAATTGAACATTACAAATGCCTTGCCTAATATGCCCATGTTGGGAAGACCGCGAGGTCGTCCTCCCCTTTCAGGTCCACCACGTCCTTCTGCTGTGTCAGGAATGCCAATAATAAGGAGTGGTGTCATGATTATGCATAATACTCCACCTGGAACGACAATCTCCAACTATCCAATCGTAAATAATCAAAGCAATGCACCTGCCGCCCCTAAAATATCAATCACTCCTTTACCTCGAGCCCCACAGCCTTCTTCCTCACAATCAGCTCACAATTCTAAAGCCACTTTTGTCATCTGCGAAATATGTGATGGTTATATTAAAGACTTAGAGCAGCTAAGGAACCACATGCAGTGGATACACAAAGTGAAAATACACCCTAAGATGATATATAACAGGCCACCATTGAACTGTCAAAAATGTCAATTTAGGTTTTTTACAGATCAAGGCTTAGAGAGGCACCTCCTTGGTTCCCATGGTTTGGTAACAAGTTCAATGCAAGAAGCAGCAAACAAGGGTAAGGATGCAGGTAGGTGTCCCGTGTGTGGCAGAGTGTATCAGTGGAAACTCCTTAATCATGTGTCAAGGGATCACAACATGACACTGAAACCAGCCCATTTATCGTACAAATGCACGGTGTGTACTGCCACTTTTGGTATGTATAAGCAGTTTGAGAATCATGTATATTCGGCTCACAGCGTCGTAGCCAAACGTGTTATGGACAAGACTAAGACTACTACTCCTGCAAGCAAACCTGCTGACTCTGAATCACTTCTTAAACCCTTAAAAATTAGTGATGAGATCACAATCATACCGCAGCCTGCAAAGTCATCACTAACTATTACTGCTAAGGGTAAATAA

Protein

MSISTATDERTEGDDDTSQGSHPKEDSSDSENETEPQNQNGGSPAPEVHEITSDDDEEEGGVTNEDDSSNSSTVSNDSSEGSQHSSKETEKKDIEHLEENGADESDIEEIAMEDPLNQTQSINKPIVINDTKCLVNLASKQTKPNGDQNKEPTVVIIDTNSILAGKGPLPLQSKMHTTTTTSMMDQQDLCQSIAARGTTITPVSNKTANQNSAHNSTPAAPPPNILPSLTDDMFVVEAPSFIVPYVYEKPSLKPFREFVDKLGKELEELKIKEEQEKAEKEKIERERRDKERKERIERGEIEEDDEVKESRKLEVAQKKEKKQGWKRTDDDDDDSWDGESSSESEEEALSDDDAVVIKEKEDSDTTDPISLIAKSLSSGKPDSYFDCSLGQFFINIGLNLVQEYVQTDLLKQQQRKLYKEKKSGRSTKSTEAAIASLSQNLDFSKKTNAPFALSHRRCDFCSFKTESMLVMAHHLEAPHMRSNIYKCNSCEFEIRSPHDILFHMEAEHNIRGRLERAPAYQQCANCHFEDNSKTKLARHLIACAKKFKPEFNLGPPLEWEPPAKIPKLTRARNNMMSSYQSNYNRPNMNNMGRPQLNITNALPNMPMLGRPRGRPPLSGPPRPSAVSGMPIIRSGVMIMHNTPPGTTISNYPIVNNQSNAPAAPKISITPLPRAPQPSSSQSAHNSKATFVICEICDGYIKDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDAGRCPVCGRVYQWKLLNHVSRDHNMTLKPAHLSYKCTVCTATFGMYKQFENHVYSAHSVVAKRVMDKTKTTTPASKPADSESLLKPLKISDEITIIPQPAKSSLTITAKGK

Uniprot

H9JUD4

Pubmed

19121390

EMBL

BABH01038576

Proteomes

UP000005204

PRIDE

H9JUD4

Interpro

IPR013087 Znf_C2H2_type

ProteinModelPortal

H9JUD4

KEGG

101744939 no KO assigned | (RefSeq) MOG interacting and ectopic P-granules protein 1-like

GO

GO:0003676 GO:0046872 GO:0016491 GO:0006351 GO:0030131 GO:0005488 GO:0008565 GO:0015031 GO:0009258 GO:0016155 GO:0003824

Length:

879

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000970000000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00008

outside

1 - 879

Pi

16.36921

Theta

13.351641

Tajima's D

0.111784

CLR

184.819309

CSRT

0.409029548522574

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree