Gene

KWMTBOMO09799

Pre Gene Modal

BGIBMGA013149

Annotation

PREDICTED:_protein_DGCR14_homolog_[Papilio_xuthus]

Location

Bomo_Chr16(-):9555332-9565428      View in EpiBrowser

Full name

Mothers against decapentaplegic homolog      

Alternative Name

SMAD family member

Location in the cell

Nuclear   Reliability : 4.066

CDS

ATGTCAGCTGGAGGAAGCGCTATGAGGCCTGGAGAGGCAGCATTACAGAACATGAAGCTGTTGAAAGCTGAGACTACTGTGTTCAAAGTACCAAAAATACCCAAACAGAAGTCAGAGAAGAAGAGCAAGGTTTTAGAGGAAGATGCTTATGTGGAGGGCATAGCAAAAATTATTCAAAGAGATTTCTTCCCTGACCTAGAGAAACTGAATGCACAGAACGAATACTTGGAGGCTACAGAAAACAAAGACTATCAGAGACTTCGAGAATTAACTCAAAAGTATAGCGGGAACAGACCACCTACAGAACCATATAACACCCCAGCCACTTTTGACACGCCAAACATTGACCGGCCGTGCACTCCTGCTACCAACAATGAGGATGCTCCCAGACAAACAAAAAATGCCACTAAAGACAAAACCGCAGATATTACTGATAACCACAGCTTAGATTCCTTTCTGGCCAAACACACGAGCGAGGACAACGAAAGCTACGATCGAGTTATATCGTTGGAGCAAAAGAAGCGTGCAAATAAAATAGCATCGCAGCTTCAAGCCGAGATCACGTCTGCAACACTCGCAGATGAAGCACTAGCTTTACCCTCCATAGAACAACAAGCTGATCAAACGGAAAGGCCACATGAATTGGACACTTGGCGTTACAAAGCTCGTAATTACATAATGTACGTGCCTGACGGGGCGGAGTCCCAGCGCCCGCCGCCGAAGCCCGAACTAGTCCACCAGAACACAAGGCTAAAAGCTCAACCCTTCGACTACGCTAAGAACAAAGAGACAATAAGCGCCATCGCGAGGAATCAGGACGCGACAGTAAACGGCAGGATAGGCGTGGACGGCAGCAGTTTGAGTTCAGAGAAGGAAGAGCGCTATCCGATACTGCAGACCTCGTCCCCCCGCCCCGGCGAGGGCGCGTCCCCCCTCATGACGTGGGGACACATCGAGGGGACGCCATTCAGACTCGACGGCGGGGACACGCCGCTACCTGCCGCGGGGGCGGGAGTGGCGTACAAGATGCTGGAAGGCGGCGCCCGGGAACGTATCGCGCTGCAGCTCGCCGAGCAACTCGCCAAGAGGAGGCGGCCCACCACCCCGAGGATACCTCCGCCCTCGCCGAGTTTTCGAACGAGCACCGAGCGCCTGGCCAGCATGTCGCCGGCGGCCAGGAAATTAGCCGCGAAACATTTACTAACACCGAGACTCAAGCTGACGCCAAACGACATGGGAATTTTATCGCACGCGGCAACACCGAAACGAACACCAACACGGCGACCGTTAGTGGCAACACCGAGCACGAATAAGAACACGGCAACATCGACCCGTCCTTCCGACTCTGGCAACGTGAACAACAGCAGTACTATGATAGAAAATAATCTCACCGACAACTTGCTGCAGATTAATGTGTGCAAAAGGAATAGATTAAAAGCTAAAGACTTCTTCGAATAA

Protein

MSAGGSAMRPGEAALQNMKLLKAETTVFKVPKIPKQKSEKKSKVLEEDAYVEGIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHSLDSFLAKHTSEDNESYDRVISLEQKKRANKIASQLQAEITSATLADEALALPSIEQQADQTERPHELDTWRYKARNYIMYVPDGAESQRPPPKPELVHQNTRLKAQPFDYAKNKETISAIARNQDATVNGRIGVDGSSLSSEKEERYPILQTSSPRPGEGASPLMTWGHIEGTPFRLDGGDTPLPAAGAGVAYKMLEGGARERIALQLAEQLAKRRRPTTPRIPPPSPSFRTSTERLASMSPAARKLAAKHLLTPRLKLTPNDMGILSHAATPKRTPTRRPLVATPSTNKNTATSTRPSDSGNVNNSSTMIENNLTDNLLQINVCKRNRLKAKDFFE

Similarity

Belongs to the dwarfin/SMAD family.

Uniprot

H9JUD6   A0A2A4K874   A0A194QIL9   A0A3S2NG66   A0A212FMS4   A0A0N1IHV9   + More
A0A1W4X9M2   A0A182Q9G4   A0A182P2K8   A0A182K0L3   A0A182MES8   N6SXM2   A0A182NSB4   U4UAF3   A0A1B6J8C4   A0A084VC49   A0A067QM37   A0A182GR23   A0A182SKJ5   Q7PXD2   A0A182YGB6   A0A182R4M3   A0A182X9P4   A0A182L8W4   A0A182VBP6   A0A182HKM8   A0A340TBC5   W5J7F1   Q16XN5   A0A0C9QMI0   A0A0L7QL02   A0A182TK09   A0A1B6FM95   A0A0T6BC55   A0A2J7Q6Y0   A0A154PML3   T1GT80   A0A2A3ESM4   A0A182IMD4   A0A182F861   A0A2M4BKZ9   A0A088AUP8   A0A1J1IB59   A0A1B6KB47   A0A2S2QLF9   A0A023F174   A0A026VV06   A0A1B6CZD1   A0A195CS64   A0A158NW43   A0A3L8DV04   A0A151I0U0   A0A151JYC3   A0A034WNX9   A0A195E3Q4   B0WKP9   A0A0K8V7N0   A0A224XMA0   K7IS55   A0A2H8TEC2   F4X2F1   E2BCB6   A0A0L0C2A7   A0A1Q3F4H2   A0A1B0FKV0   A0A0A1X1H8   A0A1B0BWA6   W8B9Z7   A0A1A9XSY2   T1HIG4   A0A151WVF8   A0A0J7L8R9   A0A1A9Z4R9   J9K3J3   A0A1A9VSH3   A0A0P5XLJ8   A0A0P4Z9C6   E2AAH4   A0A0P5ZG05   A0A0P5DAV5   A0A0N8CE25   A0A0P5PFF0   A0A146KW69   A0A0P4Z7P7   A0A0A9YSI1   A0A0P5XER4   E9G8N0   A0A1I8Q4I4   A0A0P5MBT2   A0A1A9WC46   A0A0L8G7L0   A0A139WG28   A0A1I8M1P6   T1J2N2   A0A210PVA4  

Pubmed

19121390    26354079    22118469    23537049    24438588    24845553    + More
26483478    12364791    14747013    17210077    25244985    20966253    20920257    23761445    17510324    25474469    24508170    21347285    30249741    25348373    20075255    21719571    20798317    26108605    25830018    24495485    26823975    25401762    21292972    18362917    19820115    25315136    28812685   

EMBL

BABH01038588    BABH01038589    BABH01038590    NWSH01000035    PCG80427.1    KQ458756    + More
KPJ05244.1    RSAL01000051    RVE50253.1    AGBW02007651    OWR55023.1    KQ460426    KPJ14813.1    AXCN02000206    AXCM01006934    APGK01052881    KB741216    ENN72509.1    KB631897    ERL86930.1    GECU01012321    JAS95385.1    ATLV01010370    KE524580    KFB35543.1    KK853259    KDR09235.1    JXUM01081707    KQ563264    KXJ74176.1    AAAB01008987    EAA01147.4    APCN01000847    ADMH02002026    ETN59891.1    CH477534    EAT39407.1    GBYB01004714    JAG74481.1    KQ414934    KOC59270.1    GECZ01018441    JAS51328.1    LJIG01002004    KRT84936.1    NEVH01017450    PNF24344.1    KQ434954    KZC12538.1    CAQQ02200218    KZ288192    PBC34216.1    GGFJ01004533    MBW53674.1    CVRI01000047    CRK97527.1    GEBQ01031573    JAT08404.1    GGMS01009361    MBY78564.1    GBBI01003487    JAC15225.1    KK107801    EZA47587.1    GEDC01018482    JAS18816.1    KQ977329    KYN03536.1    ADTU01027791    QOIP01000004    RLU24247.1    KQ976606    KYM79335.1    KQ981477    KYN41453.1    GAKP01003479    JAC55473.1    KQ979701    KYN19504.1    DS231974    EDS29980.1    GDHF01017438    JAI34876.1    GFTR01005468    JAW10958.1    GFXV01000636    MBW12441.1    GL888578    EGI59376.1    GL447257    EFN86652.1    JRES01000984    KNC26493.1    GFDL01012585    JAV22460.1    CCAG010002139    GBXI01009566    JAD04726.1    JXJN01021691    GAMC01011068    JAB95487.1    ACPB03010282    KQ982721    KYQ51661.1    LBMM01000267    KMR02300.1    ABLF02037641    GDIP01196440    GDIP01168296    GDIP01146146    GDIP01088946    GDIP01071906    GDIP01066956    GDIP01065504    JAM31809.1    GDIP01216687    JAJ06715.1    GL438125    EFN69575.1    GDIP01211693    GDIP01185088    GDIP01183734    GDIP01162946    GDIP01137639    GDIP01132293    GDIP01073258    GDIP01044604    JAM59111.1    GDIP01164042    JAJ59360.1    GDIP01213492    GDIP01200534    GDIP01159638    GDIP01146147    GDIP01140847    GDIP01088947    GDIP01039660    JAL62867.1    GDIQ01131544    JAL20182.1    GDHC01017885    JAQ00744.1    GDIP01216685    JAJ06717.1    GBHO01009032    GBHO01009031    GBHO01009029    GBHO01009028    JAG34572.1    JAG34573.1    JAG34575.1    JAG34576.1    GDIP01213493    GDIP01211694    GDIP01185087    GDIP01137685    GDIP01132294    GDIP01073257    GDIP01053720    GDIP01044605    LRGB01002451    JAM30458.1    KZS07545.1    GL732535    EFX84237.1    GDIQ01157769    JAK93956.1    KQ423598    KOF72570.1    KQ971348    KYB26902.1    JH431806    NEDP02005467    OWF40395.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000007151    UP000053240    + More
UP000192223    UP000075886    UP000075885    UP000075881    UP000075883    UP000019118    UP000075884    UP000030742    UP000030765    UP000027135    UP000069940    UP000249989    UP000075901    UP000007062    UP000076408    UP000075900    UP000076407    UP000075882    UP000075903    UP000075840    UP000075920    UP000000673    UP000008820    UP000053825    UP000075902    UP000235965    UP000076502    UP000015102    UP000242457    UP000075880    UP000069272    UP000005203    UP000183832    UP000053097    UP000078542    UP000005205    UP000279307    UP000078540    UP000078541    UP000078492    UP000002320    UP000002358    UP000007755    UP000008237    UP000037069    UP000092444    UP000092460    UP000092443    UP000015103    UP000075809    UP000036403    UP000092445    UP000007819    UP000078200    UP000000311    UP000076858    UP000000305    UP000095300    UP000091820    UP000053454    UP000007266    UP000095301    UP000242188   

PRIDE

H9JUD6   

Pfam

PF09751   Es2        + More
PF05444   DUF753
PF00907   T-box
PF03165   MH1
PF03166   MH2

Interpro

IPR019148   Nuclear_protein_DGCR14_ESS-2        + More
IPR008472   DUF753       
IPR008967   p53-like_TF_DNA-bd       
IPR001699   TF_T-box       
IPR018186   TF_T-box_CS       
IPR036960   T-box_sf       
IPR001132   SMAD_dom_Dwarfin-type       
IPR013019   MAD_homology_MH1       
IPR017855   SMAD-like_dom_sf       
IPR008984   SMAD_FHA_dom_sf       
IPR013790   Dwarfin       
IPR036578   SMAD_MH1_sf       
IPR003619   MAD_homology1_Dwarfin-type       

SUPFAM

SSF49417   SSF49417        + More
SSF49879   SSF49879       
SSF56366   SSF56366       

Gene 3D

2.60.40.820     2.60.200.10     3.90.520.10    

CDD

cd00182  TBOX

ProteinModelPortal

H9JUD6   A0A2A4K874   A0A194QIL9   A0A3S2NG66   A0A212FMS4   A0A0N1IHV9   + More
A0A1W4X9M2   A0A182Q9G4   A0A182P2K8   A0A182K0L3   A0A182MES8   N6SXM2   A0A182NSB4   U4UAF3   A0A1B6J8C4   A0A084VC49   A0A067QM37   A0A182GR23   A0A182SKJ5   Q7PXD2   A0A182YGB6   A0A182R4M3   A0A182X9P4   A0A182L8W4   A0A182VBP6   A0A182HKM8   A0A340TBC5   W5J7F1   Q16XN5   A0A0C9QMI0   A0A0L7QL02   A0A182TK09   A0A1B6FM95   A0A0T6BC55   A0A2J7Q6Y0   A0A154PML3   T1GT80   A0A2A3ESM4   A0A182IMD4   A0A182F861   A0A2M4BKZ9   A0A088AUP8   A0A1J1IB59   A0A1B6KB47   A0A2S2QLF9   A0A023F174   A0A026VV06   A0A1B6CZD1   A0A195CS64   A0A158NW43   A0A3L8DV04   A0A151I0U0   A0A151JYC3   A0A034WNX9   A0A195E3Q4   B0WKP9   A0A0K8V7N0   A0A224XMA0   K7IS55   A0A2H8TEC2   F4X2F1   E2BCB6   A0A0L0C2A7   A0A1Q3F4H2   A0A1B0FKV0   A0A0A1X1H8   A0A1B0BWA6   W8B9Z7   A0A1A9XSY2   T1HIG4   A0A151WVF8   A0A0J7L8R9   A0A1A9Z4R9   J9K3J3   A0A1A9VSH3   A0A0P5XLJ8   A0A0P4Z9C6   E2AAH4   A0A0P5ZG05   A0A0P5DAV5   A0A0N8CE25   A0A0P5PFF0   A0A146KW69   A0A0P4Z7P7   A0A0A9YSI1   A0A0P5XER4   E9G8N0   A0A1I8Q4I4   A0A0P5MBT2   A0A1A9WC46   A0A0L8G7L0   A0A139WG28   A0A1I8M1P6   T1J2N2   A0A210PVA4  

KEGG

101745334    K13118 protein DGCR14 | (RefSeq) protein DGCR14 homolog

GO

GO:0003700   GO:0003677   GO:0005634   GO:0005737   GO:0007179   GO:0005667  

PANTHER

PTHR12940   PTHR11267   PTHR13703  

Subcellular location

Nucleus  
Cytoplasm  

Length:

485

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00159

outside

1  -  485

 

 

Pi

248.048222

Theta

164.444994

Tajima's D

1.030524

CLR

1.686265

CSRT

0.660366981650917

Interpretation

Uncertain