Silkworm Genome Informatics Database

Gene

KWMTBOMO09786

Pre Gene Modal

BGIBMGA012916

Annotation

hypothetical_protein_KGM_15512_[Danaus_plexippus]

Location

Bomo_Chr16(+):9255165-9258010 View in EpiBrowser

Transcription factor

MYB

Location in the cell

Nuclear Reliability : 3.882

CDS

ATGCCAATGAACGCAGTCGGATGGACAACAGAAGAAGACGAAAAATTAATTGATCTAGTTAAACCATACGCTCATTTGTACAACGTAAAAGACCCCTCCAGGAAGAATATACTAGCAAGGGAAACAACATGGCAAGAAATAGCGAAACAGATATCCAGACCAGTTGAAGAATGCAGGAAGAGATGGAGAGGTCTCCGTGATAGTTATACAAGAAGTAAACGTCTCGGTAGTATGCCAGGTTACACCAAATTAGTTGTCTACAAAAAACTGAATTTCCTTGATGACATCTTGGTTGATAGCACCGAAGACATGGAGGCAGAAGAAAGTAATCAGATTAATGAACAAAAACCAAAAACAGAACAAGAGGTTATAACAGATAATCAAGAGTATTATGAGATCAGACTAGTTGACAATGCAGATATTGAGAGCAAGTTCATCAAAATATTACCCAAACAAATAGAAAACAGTAACAAACAACCCAAGAAAATAGGAAAAAAGAACAGTGGTCGTAAGAAAACGGTACCGATGCCAAGAGACATGCCACCAGTGAAAATATTACCGAAACCACTACTTGTAAATGGACCAAAGATCGTACAATACATAGAAGATCAGAATCAAATACCAGTCGCATCCAGAACACAGACCATCGATAAACTCATAGAAAGAATTCTTAAGGAGAATACCAATGAAATTGATGTGTTCTTTAGAAGCATGGCATCTAGTGTCAAGAAATTACAACCAAATTTAATACCTAAAGTCAAAATGGAAGTTTGCAATGTGATTGCCAAATATGAGATGCAGAGTTTTGACAAAAGTAATCTTAACAATTGA

Protein

MPMNAVGWTTEEDEKLIDLVKPYAHLYNVKDPSRKNILARETTWQEIAKQISRPVEECRKRWRGLRDSYTRSKRLGSMPGYTKLVVYKKLNFLDDILVDSTEDMEAEESNQINEQKPKTEQEVITDNQEYYEIRLVDNADIESKFIKILPKQIENSNKQPKKIGKKNSGRKKTVPMPRDMPPVKILPKPLLVNGPKIVQYIEDQNQIPVASRTQTIDKLIERILKENTNEIDVFFRSMASSVKKLQPNLIPKVKMEVCNVIAKYEMQSFDKSNLNN

Uniprot

H9JTQ4 A0A2A4JFL5 A0A2W1BUB8 A0A2H1VP33 A0A212FN36 A0A194Q1E2 + More
A0A0N1IBJ9 A0A0L7L844 A0A1S4EFV2 A0A3Q0J0L1 A0A2S2Q1I5 J9KGR4 H9JNK1 A0A1B6K5I5 J9L0N3 A0A437ATS9

Pubmed

19121390 28756777 22118469 26354079 26227816

EMBL

BABH01003386 NWSH01001770 PCG70192.1 KZ149898 PZC78672.1 ODYU01003607 + More
SOQ42583.1 AGBW02007650 OWR55119.1 KQ459582 KPI98809.1 KQ461183 KPJ07541.1 JTDY01002326 KOB71658.1 GGMS01002413 MBY71616.1 ABLF02027196 BABH01035219 GECU01001001 JAT06706.1 ABLF02035352 RSAL01000454 RVE41664.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000053268 UP000053240 UP000037510 + More
UP000079169 UP000007819 UP000283053

PRIDE

H9JTQ4 H9JNK1

Pfam

PF10545 MADF_DNA_bdg + More
PF02944 BESS

Interpro

IPR009057   Homeobox-like_sf        + More
IPR039353   TF_Adf1
IPR001005   SANT/Myb
IPR017877   Myb-like_dom
IPR006578   MADF-dom
IPR017930   Myb_dom
IPR004210   BESS_motif

SUPFAM

SSF46689 SSF46689

CDD

cd00167 SANT

ProteinModelPortal

H9JTQ4 A0A2A4JFL5 A0A2W1BUB8 A0A2H1VP33 A0A212FN36 A0A194Q1E2 + More
A0A0N1IBJ9 A0A0L7L844 A0A1S4EFV2 A0A3Q0J0L1 A0A2S2Q1I5 J9KGR4 H9JNK1 A0A1B6K5I5 J9L0N3 A0A437ATS9

PDB

5EYB E-value=0.0728686, Score=82

KEGG

101740737 no KO assigned | (RefSeq) uncharacterized LOC101740737

GO

GO:0003677 GO:0005634 GO:0005524 GO:0016459 GO:0030131 GO:0005488 GO:0008565 GO:0015031 GO:0009258 GO:0016155 GO:0003824

PANTHER

PTHR12243

Subcellular location

Nucleus

Length:

276

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04433

outside

1 - 276

Pi

303.043479

Theta

223.651483

Tajima's D

1.230698

CLR

0.155952

CSRT

0.72126393680316

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics