SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09785
Pre Gene Modal
BGIBMGA012919
Annotation
Regulatory_protein_RecX_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 4.09
 

Sequence

CDS
ATGTTTCACGTTCAAGGCTCATTCGAACAGTCGTTACGATGCGGCGACGAAGTATCGCCAAATGGGAACAAGACCTTGGCCGCGCTGGCCAAAATCCACAAACACTGTATAGGTAAAGCCCATGCCAATGGGTGTGTAGATCATAAACACAATCCACTCGCAAAGTCTGACTCGAATACTAGTTTGCAATCTAAAAAGTCCTTTCGTGGAGATTGCATCATTGAAATCAAAGAAGCAGATCGAAATCAACAAGATTTAAGTAAACCCAACGATGGAGGATTCACAAAGAGCTTTAGCAACAGTACAAGCTCGTATGAAGGACACAGTGATACTGATTCGGAGAATTTTAAATCAAAAGTAGATCCCAATAAGGCAATGGATCCATGCGAACGTCTTTTCGCACAAAATACTAAAACATCCCTGATGAAAACGGCTCGGATGCGGTATGCTGATGATCCTGTTGTACAGGATGAAGTCGATGGTGACAAAACTAAACAAACCTTTGTGAGAACACCATCAAGATCCAGCTATAGAGAACGAAAATCAGGCGTCGTTACTATAGAACAGGTCAAGTCAGATTGTGCCAATCATGACGAAGAACTCGGCAATTCAATGTTGTTCGATGATAAGAAGAAGACTCCTACACAAAATAAGTCAATGTTACAACGCAAGGGCTCTACTGGAAGTAGTGCATCAAATGGAAAAGCCAATGGAGTAAAACCACCTTGGAAAGGAGCAAGTAAGAACGGTATACCGCCCGAGTCTTTTATCCGTACACCATCGCTTCGAGGAAGTATCCGAAAGAAAACCACAAAAAACGATGGAGTACCGTGGCGTAAACTGTACGAACTTTCGCTTTGGAGGAGGTGTGGCGTGAGTTTCGCTACGGTTGGCGCCGATACTGAACGCGCGTTATTGCGGCCATGGAGCGAACTGTCTTCACAGCACCATCCGCCGCCCGTACTCGAGCAAACCATTAGCAGAGAGAAATACGATGTATAA
Protein
MFHVQGSFEQSLRCGDEVSPNGNKTLAALAKIHKHCIGKAHANGCVDHKHNPLAKSDSNTSLQSKKSFRGDCIIEIKEADRNQQDLSKPNDGGFTKSFSNSTSSYEGHSDTDSENFKSKVDPNKAMDPCERLFAQNTKTSLMKTARMRYADDPVVQDEVDGDKTKQTFVRTPSRSSYRERKSGVVTIEQVKSDCANHDEELGNSMLFDDKKKTPTQNKSMLQRKGSTGSSASNGKANGVKPPWKGASKNGIPPESFIRTPSLRGSIRKKTTKNDGVPWRKLYELSLWRRCGVSFATVGADTERALLRPWSELSSQHHPPPVLEQTISREKYDV

Summary

Similarity
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
Pfam
PF00063   Myosin_head
Interpro
IPR036064   MYSc_Myo18        + More
IPR036961   Kinesin_motor_dom_sf       
IPR001609   Myosin_head_motor_dom       
IPR027417   P-loop_NTPase       
SUPFAM
SSF52540   SSF52540       
Gene 3D

Ontologies

Topology

Length:
333
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00700
outside
1  -  333
 
 

Population Genetic Test Statistics

Pi
305.655283
Theta
192.509288
Tajima's D
1.442651
CLR
0.510735
CSRT
0.774061296935153
Interpretation
Uncertain
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