Gene

KWMTBOMO09782

Pre Gene Modal

BGIBMGA012920

Annotation

PREDICTED:_unconventional_myosin-XVIIIa?_partial_[Bombyx_mori]

Location

Bomo_Chr16(-):9170495-9175144      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.978

CDS

ATGGTGGAACTGCTGGATAAGGCTCCGCAGAACTCGATCGTGCGGAGCTCACAGACCGACCTGCGGGAATGCGACCGACGCGGACTACTATGGCTACTAGACGAAGAGTCCATGTATCCCGGCTCGTCCGACGACACGTTCCTAGAGCGAGTGATGACGCACTACGGTCCGCCGAATCAGATGCAGTACCTCATCAAGAAGGCCCCGCATGCCAGACAGTTTATATTGCAGCATTTACAGGGAACTAACCCGGTGCTATACGACGTCACCGGCTGGGTGAAGGCGAGCCGCGAGAACCCAGTCACGAAGAAGTCTCTCACATTACTACAGGAGAGCCAGAACGAGGAAGTGTCACGGCTGTCGTCGTGGGCTCGCGGCGCATGCGGCGTGAGCGCGTGGTCGGCCGCAGTGGGGGACGCCACTACTCTACGGCGGGCTTCTTCTATCCGACGAACCCTTACTTCGGGTACGGCCGGCATGAAGCGTCGCTCGACCGCCCTGCAAGCGAAGTTCGTTGCGGACGGCGTGGTGGACACGCTGCGGCGGTGCGGCACGAGCGGCGTCATGTTCGTGTGCTGTCTGCTCGCGAACCGACCGACCGACTCGCCCGATGACGTCAACGTGCCGCTCCTACGATCGCAGTTCCGCGGATTCCAACTGCTGGACGCGTCGAGGCTTTACAAGCAAGGTTTCCCCGAGCACATGCCGCTGTCGGAATTCGCCAGAAGATATCGTCTTCTAGCGACATCCGAGAGTGAAGACTCCGAAACGAATCAGCAGCAGACCCTCTCGGACAGGCAGGTCGTCGACGACATGCTCCTGGCCTTGGACTTGGACGTCACCAGCTACAGGCTCGGGCTCACTCAGGTAGGTCCTAGCTCACGTACCGCCCGACTGTCCTGCTCGAACCCCGGGCGATCGCAATACGAAGGAATGAGACGGAAACATTTAACAATTAAACTAGTGTCGGATCTATGA

Protein

MVELLDKAPQNSIVRSSQTDLRECDRRGLLWLLDEESMYPGSSDDTFLERVMTHYGPPNQMQYLIKKAPHARQFILQHLQGTNPVLYDVTGWVKASRENPVTKKSLTLLQESQNEEVSRLSSWARGACGVSAWSAAVGDATTLRRASSIRRTLTSGTAGMKRRSTALQAKFVADGVVDTLRRCGTSGVMFVCCLLANRPTDSPDDVNVPLLRSQFRGFQLLDASRLYKQGFPEHMPLSEFARRYRLLATSESEDSETNQQQTLSDRQVVDDMLLALDLDVTSYRLGLTQVGPSSRTARLSCSNPGRSQYEGMRRKHLTIKLVSDL

Similarity

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.

Uniprot

A0A437BUD6   A0A2W1BZI1   A0A0N1PHY8   A0A2H1WRU5   A0A194Q5X7   A0A212FN01   + More
V5GQ49   A0A0T6BC04   A0A2J7RBF5   U4UEQ3   A0A139WGL1   A0A067RC42   N6U8J1   A0A2H4N1N4   A0A336LCU1   A0A0N7Z9U1   A0A423TMF8   A0A0P4VP09   A0A0P4VXL2   A0A0P4W1V9   A0A336KMA4   A0A336M5L3   W8AFR9   W8AMD2   A0A1L8E548   A0A1L8E4V9   A0A1L8E4V2   A0A0A1X1N6   A0A0K8UTA8   A0A0A1WQ65   A0A1I8PN66   A0A0K8VQN6   A0A1I8PN10   A0A1I8PN26   A0A1I8PN68   T1PBT3   T1PKM2   T1PMH2   A0A1I8N1D3   T1PBP0   A0A1A9X461   A0A1A9X984   A0A1B0BF34   A0A0Q9X0N3   A0A0Q9XAY5   A0A0Q9XA56   A0A0Q9X0J5   A0A0Q9XAP8   B4KAF0   A0A2P2I3X8   A0A0P8YH61   A0A1B0GDT3   B4JG99   B3LZY8   A0A0N8P1R5   A0A0P8YPG9   A0A0P9A230   Q9VEZ0   B4QXQ6   A0A1W4VBY6   Q0KI67   A0A0R3NJI5   Q8INC3   Q0KI66   A0A1W4VBW5   Q7K523   Q294V0   I5APN9   A0A0R3NJQ4   A0A0R3NJN7   A0A1W4VQA3   A0A0R3NPQ9   A0A3B0JN63   A0A0Q9WPK8   A0A0Q9WNE5   A0A0Q9WEF7   A0A0Q9WEQ3   A0A0Q9WFE7   A0A0Q9WQD2   A0A0M3QX70   B4LY10   B4GMK8   B4PR41   A0A0R1E337   B4NL11   A0A0R1E3R7   A0A0R1E726   A0A0Q9X279   A0A0R1E331   B3P0Y0   B0WL75   A0A1Q3EU29   A0A1Q3FUB1   A0A087UPQ7   A0A232FLA0   K7J5Q2   A0A2L2YU38   A0A0J7L5S4  

Pubmed

28756777    26354079    22118469    23537049    18362917    19820115    + More
24845553    24495485    25830018    25315136    17994087    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    15632085    23185243    17550304    28648823    20075255    26561354   

EMBL

RSAL01000008    RVE54000.1    KZ149898    PZC78667.1    KQ461183    KPJ07540.1    + More
ODYU01010550    SOQ55737.1    KQ459582    KPI98810.1    AGBW02007650    OWR55121.1    GALX01004729    JAB63737.1    LJIG01002209    KRT84731.1    NEVH01005904    PNF38166.1    KB632058    ERL88380.1    KQ971345    KYB27001.1    KK852802    KDR16277.1    APGK01038829    APGK01038830    KB740963    ENN76971.1    KY653069    ATU47263.1    UFQS01002624    UFQT01002624    SSX14375.1    SSX33786.1    GDRN01109970    JAI56992.1    QCYY01001502    ROT77628.1    GDRN01109973    JAI56989.1    GDRN01109972    JAI56990.1    GDRN01109971    GDRN01109969    GDRN01109968    JAI56993.1    UFQS01000594    UFQT01000594    SSX05202.1    SSX25563.1    SSX05201.1    SSX25562.1    GAMC01019440    GAMC01019439    JAB87115.1    GAMC01019442    GAMC01019441    GAMC01019438    JAB87117.1    GFDF01000320    JAV13764.1    GFDF01000314    JAV13770.1    GFDF01000321    JAV13763.1    GBXI01009048    JAD05244.1    GDHF01033592    GDHF01022385    GDHF01020550    JAI18722.1    JAI29929.1    JAI31764.1    GBXI01013300    JAD00992.1    GDHF01011439    GDHF01001328    JAI40875.1    JAI50986.1    KA645570    AFP60199.1    KA649296    AFP63925.1    KA649295    AFP63924.1    KA645525    AFP60154.1    JXJN01013279    CH933806    KRG01664.1    KRG01665.1    KRG01666.1    KRG01663.1    KRG01662.1    EDW15663.2    IACF01002953    LAB68586.1    CH902617    KPU80658.1    CCAG010012023    CCAG010012024    CCAG010012025    CH916369    EDV92568.1    EDV44178.2    KPU80660.1    KPU80655.1    KPU80657.1    KPU80661.1    AE014297    AAF55271.3    CM000364    EDX12730.1    ABI31171.1    CM000070    KRT01128.1    AAN13695.2    ABI31172.1    AY051503    AAK92927.1    EAL28864.3    EIM52924.2    KRT01129.1    KRT01131.1    KRT01127.1    KRT01133.1    OUUW01000008    SPP83665.1    CH940650    KRF82959.1    KRF82961.1    KRF82957.1    KRF82960.1    KRF82963.1    KRF82962.1    KRF82958.1    CP012526    ALC45349.1    EDW66876.2    CH479185    EDW38082.1    CM000160    EDW97363.2    KRK03675.1    CH964272    EDW84214.2    KRK03679.1    KRK03681.1    KRF99993.1    KRK03680.1    CH954181    EDV49099.1    DS231980    EDS30248.1    GFDL01016238    JAV18807.1    GFDL01003979    JAV31066.1    KK120912    KFM79346.1    NNAY01000051    OXU31521.1    IAAA01054211    LAA11613.1    LBMM01000642    KMQ97908.1   

Proteomes

UP000283053    UP000053240    UP000053268    UP000007151    UP000235965    UP000030742    + More
UP000007266    UP000027135    UP000019118    UP000283509    UP000095300    UP000095301    UP000091820    UP000092443    UP000092460    UP000009192    UP000007801    UP000092444    UP000001070    UP000000803    UP000000304    UP000192221    UP000001819    UP000268350    UP000008792    UP000092553    UP000008744    UP000002282    UP000007798    UP000008711    UP000002320    UP000054359    UP000215335    UP000002358    UP000036403   

PRIDE

Q9VEZ0    Q0KI67    Q8INC3    Q0KI66    Q7K523   

Pfam

PF00063   Myosin_head        + More
PF01576   Myosin_tail_1
PF00612   IQ
PF17820   PDZ_6
PF13873   Myb_DNA-bind_5
PF00595   PDZ

Interpro

IPR036961   Kinesin_motor_dom_sf        + More
IPR001609   Myosin_head_motor_dom       
IPR027417   P-loop_NTPase       
IPR036064   MYSc_Myo18       
IPR027401   Myosin_IQ_contain_sf       
IPR000048   IQ_motif_EF-hand-BS       
IPR002928   Myosin_tail       
IPR001478   PDZ       
IPR036034   PDZ_sf       
IPR041489   PDZ_6       
IPR028002   Myb_DNA-bind_5       

SUPFAM

SSF52540   SSF52540        + More
SSF50156   SSF50156       

Gene 3D

3.40.850.10     4.10.270.10    

CDD

cd01386  MYSc_Myo18

ProteinModelPortal

A0A437BUD6   A0A2W1BZI1   A0A0N1PHY8   A0A2H1WRU5   A0A194Q5X7   A0A212FN01   + More
V5GQ49   A0A0T6BC04   A0A2J7RBF5   U4UEQ3   A0A139WGL1   A0A067RC42   N6U8J1   A0A2H4N1N4   A0A336LCU1   A0A0N7Z9U1   A0A423TMF8   A0A0P4VP09   A0A0P4VXL2   A0A0P4W1V9   A0A336KMA4   A0A336M5L3   W8AFR9   W8AMD2   A0A1L8E548   A0A1L8E4V9   A0A1L8E4V2   A0A0A1X1N6   A0A0K8UTA8   A0A0A1WQ65   A0A1I8PN66   A0A0K8VQN6   A0A1I8PN10   A0A1I8PN26   A0A1I8PN68   T1PBT3   T1PKM2   T1PMH2   A0A1I8N1D3   T1PBP0   A0A1A9X461   A0A1A9X984   A0A1B0BF34   A0A0Q9X0N3   A0A0Q9XAY5   A0A0Q9XA56   A0A0Q9X0J5   A0A0Q9XAP8   B4KAF0   A0A2P2I3X8   A0A0P8YH61   A0A1B0GDT3   B4JG99   B3LZY8   A0A0N8P1R5   A0A0P8YPG9   A0A0P9A230   Q9VEZ0   B4QXQ6   A0A1W4VBY6   Q0KI67   A0A0R3NJI5   Q8INC3   Q0KI66   A0A1W4VBW5   Q7K523   Q294V0   I5APN9   A0A0R3NJQ4   A0A0R3NJN7   A0A1W4VQA3   A0A0R3NPQ9   A0A3B0JN63   A0A0Q9WPK8   A0A0Q9WNE5   A0A0Q9WEF7   A0A0Q9WEQ3   A0A0Q9WFE7   A0A0Q9WQD2   A0A0M3QX70   B4LY10   B4GMK8   B4PR41   A0A0R1E337   B4NL11   A0A0R1E3R7   A0A0R1E726   A0A0Q9X279   A0A0R1E331   B3P0Y0   B0WL75   A0A1Q3EU29   A0A1Q3FUB1   A0A087UPQ7   A0A232FLA0   K7J5Q2   A0A2L2YU38   A0A0J7L5S4  

PDB

5N6A     E-value=1.52889e-10,     Score=158

KEGG

101745193    K10362 myosin XVIII | (RefSeq) unconventional myosin-XVIIIa

GO

GO:0003774   GO:0003779   GO:0016459   GO:0005524   GO:0016021   GO:0051015   GO:0030017   GO:0042623   GO:0030131   GO:0005488   GO:0008565   GO:0015031   GO:0009258   GO:0016155   GO:0003824  

Length:

325

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00184

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00808

outside

1  -  325

 

 

Pi

473.195521

Theta

198.271818

Tajima's D

4.263006

CLR

0.376333

CSRT

0.999550022498875

Interpretation

Uncertain