Gene

KWMTBOMO09771

Pre Gene Modal

BGIBMGA012914

Annotation

PREDICTED:_beta-chimaerin_[Amyelois_transitella]

Location

Bomo_Chr16(+):8909170-8917148      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.25

CDS

ATGGAGAACTTGAAAAATATTTGGAAACCAGAGTTGTATCGTATTCAAATGGAAGCTCCTGTACCGAAGCGGGTTCCTTGTGACCATTGTCCGGATAGACCTAAGTTTTACGGGAAAGAATTTCATGGCATTCTAGGACATAAGGAAGCCACACTGTTGTTAGAAAATGAACCGAACGGTGCCTTCTTGATTAGAAAAGGGAATCCCTACAACGACTTTTACACACTGACTTGGAGATTCAATGACAAAGTTCATCATTATAAACTTTACTATGATGGAACACATTACATAAAAGATAAACGTTATGACACTATATATGACCTTGTTGCGGATGGACTCATTACCTGCCACATGGAGATAAAAGCTCATCATATACTGGAGATGATCAACTCAAGGGCCAATTACACGGACAGCCCGTATGTGACGTTAAATAGAAGAAAATTAAATACATTATCTAAAATACAACAAGCTTCGAACAAGTCAAGTCCAATATTAAACAGAATTGAATCGAAAATCACTGAAGTTGATTCATCTATAAAGCCAATCTGCGAACTCACTCCCACTATAGAAAATAATCCATTAGTCATTAAATACTCAAAATCACACAATTTTCGTGTCCACACGTTCAAAGGGCTAAACTGGTGTGAATTCTGCGCCAATTTTCTATGGGGTTTCACTGCACAGGGAGTGAAATGTGAAGATTGCGGCTTCATAGCTCATTCGAAATGTTCGGAACGCGCTCCTAATCACTGCGTCCCCGATCTAAAGAAGCTACGCGGTGTCTTCGGCATAGATCTGACGACGCTCCTGAATGCGCATTCCAGTACGATGCCGTTCGTTGTGACGAAGTGTGTGAACGAAATAGAATCTAGGGGAATGGACTCTGAAGGCATATACAGGGTGTCCGGTTTCGCTGACGAAATTGAGGCATTGAAATTGGCCTTTGATCGAGACGGTGAAGCAACGGATCTCAGCGTGTACAGCAACATAAACGTAATAGCGGGAACTCTGAAACTTTATTTACGGTTATTGCCCGTGCCGTTGATCACATACGAAGTCCACCCCAAGCTCGTAATGGCGATACAACCGAAGACTATCCCGCAGCAGATAATGATGCTGAGGCAGTGTCTGGAGCCGCTGCCGCCTGCTCACTTCAACTGTCTTCAGTACATGATGCAGCATTTACACAGGGTGTCCCAACAAGCAGAGGTTAATAAGATGAGCGCTCACAATTTGAGTACCGTTTTCGCGCCAACACTAGTAGCTACTCCGCCCGCCATCACCGACCTAGCCTTCGAGATTCGAGCTCTTCAGATATTGATTGAGCACTGTCCACAAATATACCAAGACTCAAAGTGA

Protein

MENLKNIWKPELYRIQMEAPVPKRVPCDHCPDRPKFYGKEFHGILGHKEATLLLENEPNGAFLIRKGNPYNDFYTLTWRFNDKVHHYKLYYDGTHYIKDKRYDTIYDLVADGLITCHMEIKAHHILEMINSRANYTDSPYVTLNRRKLNTLSKIQQASNKSSPILNRIESKITEVDSSIKPICELTPTIENNPLVIKYSKSHNFRVHTFKGLNWCEFCANFLWGFTAQGVKCEDCGFIAHSKCSERAPNHCVPDLKKLRGVFGIDLTTLLNAHSSTMPFVVTKCVNEIESRGMDSEGIYRVSGFADEIEALKLAFDRDGEATDLSVYSNINVIAGTLKLYLRLLPVPLITYEVHPKLVMAIQPKTIPQQIMMLRQCLEPLPPAHFNCLQYMMQHLHRVSQQAEVNKMSAHNLSTVFAPTLVATPPAITDLAFEIRALQILIEHCPQIYQDSK

Uniprot

H9JTQ2   A0A212FMI7   A0A437BUH1   A0A0N1PJ62   A0A2H1WFE4   A0A2A4JBL6   + More
A0A2W1BUD8   A0A2J7PWT7   A0A2J7PWS9   A0A067RJP7   A0A1A9WWZ1   A0A084VRD2   A0A1L8DM24   B0WR56   Q16IL8   A0A182J726   A0A1B0CXC0   A0A1B0FKU4   A0A1B0ALM7   A0A1A9X7S6   B4PZN9   A0A1W4W3H2   B4L5Q6   A0A1Y1LJ93   A0A2M3Z7V8   A0A2M4BLX3   A0A2M4AFM5   B4M794   A0A1W4WE34   Q7QDA3   A0A1W4WFC9   D6WRJ7   B4JP00   A0A182UPA9   A0A182HU90   A0A182LFS6   A0A0L0C438   B3MRH8   Q29I99   A0A1I8Q0G7   A0A0K8TMP0   A0A0M4ELS2   B4ND77   A0A1W4WF25   A0A3B0JEJ2   W8BCK8   A0A0A1WWU7   A0A139WFK2   Q9W4A9   A0A1I8N937   A0A034WHT8   A0A336LRB7   B4I0N1   A0A0K8V4H9   A0A182Q834   A0A182TIW2   B4R4Z8   A0A1B6H9W5   B3NV58   N6TWT7   A0A1W4VSE4   A0A182F7E8   A0A2P8YPD2   A0A2J7PWT6   A0A182WRI5   T1ICJ0   A0A182SXF3   A0A0A9XGK7   A0A0K8T210   A0A182PAA2   W5JF93   A0A182RNQ0   A0A182JXU1   A0A182MVL2   A0A069DUF5   A0A182GP74   A0A023F3D4   A0A0V0GB65   A0A2H8TMD2   A0A224XH28   J9K8J3   A0A2S2NZN9   A0A1A9Z4R0   A0A1A9VSH0   A0A182N628   A0A224XH58   E0VD29   A0A1B6DY43   A0A443SP87   A0A147BPU5   A0A131XYT9   Q961S1   A0A3S3RNN8   T1IUY4   A0A131YW05   A0A0Q5T2U6   L7MIT4   A0A1E1XKM8   K1RDE8  

Pubmed

19121390    22118469    26354079    28756777    24845553    24438588    + More
17510324    17994087    17550304    28004739    12364791    14747013    17210077    18362917    19820115    20966253    26108605    15632085    26369729    24495485    25830018    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25315136    25348373    23537049    29403074    25401762    26823975    20920257    23761445    26334808    26483478    25474469    20566863    29652888    26109357    26109356    26830274    25576852    29209593    22992520   

EMBL

BABH01003421    AGBW02007651    OWR54899.1    RSAL01000008    RVE54006.1    KQ460635    + More
KPJ13433.1    ODYU01008246    SOQ51666.1    NWSH01002123    PCG69088.1    KZ149898    PZC78658.1    NEVH01020869    PNF20790.1    PNF20788.1    KK852470    KDR23223.1    ATLV01015606    KE525023    KFB40526.1    GFDF01006659    JAV07425.1    DS232051    EDS33162.1    CH478071    EAT34113.1    AJWK01033523    AJWK01033524    AJWK01033525    CCAG010002139    JXJN01000025    CM000162    EDX01106.1    CH933811    EDW06515.1    GEZM01055746    JAV72951.1    GGFM01003862    MBW24613.1    GGFJ01004914    MBW54055.1    GGFK01006263    MBW39584.1    CH940653    EDW62661.1    AAAB01008859    EAA07917.4    KQ971351    EFA06578.1    CH916371    EDV92443.1    APCN01000612    JRES01001001    KNC26239.1    CH902622    EDV34383.1    CH379063    EAL32755.3    GDAI01001991    JAI15612.1    CP012528    ALC48496.1    CH964239    EDW82786.1    OUUW01000003    SPP78602.1    GAMC01015649    JAB90906.1    GBXI01011166    JAD03126.1    KYB26778.1    AE014298    AAF46047.1    GAKP01005614    JAC53338.1    UFQT01000054    SSX19059.1    CH480819    EDW53062.1    GDHF01018558    JAI33756.1    AXCN02000193    CM000366    EDX17147.1    GECU01036240    JAS71466.1    CH954180    EDV45906.1    APGK01014012    APGK01052024    KB741208    KB739171    ENN72856.1    ENN82355.1    PYGN01000453    PSN46102.1    PNF20789.1    ACPB03020778    GBHO01025661    GDHC01000007    JAG17943.1    JAQ18622.1    GBRD01006581    JAG59240.1    ADMH02001371    ETN62756.1    AXCM01001083    GBGD01001552    JAC87337.1    JXUM01077847    KQ563030    KXJ74612.1    GBBI01002914    JAC15798.1    GECL01001055    JAP05069.1    GFXV01002633    MBW14438.1    GFTR01006092    JAW10334.1    ABLF02013993    GGMR01010064    MBY22683.1    GFTR01006062    JAW10364.1    DS235070    EEB11285.1    GEDC01012341    GEDC01006721    JAS24957.1    JAS30577.1    NCKV01000955    RWS29350.1    GEGO01002616    JAR92788.1    GEFM01004506    JAP71290.1    AY050239    AAK84938.1    AAN09145.1    NCKU01006260    NCKU01003865    RWS03686.1    RWS06800.1    JH431567    GEDV01006211    JAP82346.1    KQS29746.1    GACK01000923    JAA64111.1    GFAA01003554    JAT99880.1    JH816866    EKC41714.1   

Proteomes

UP000005204    UP000007151    UP000283053    UP000053240    UP000218220    UP000235965    + More
UP000027135    UP000091820    UP000030765    UP000002320    UP000008820    UP000075880    UP000092461    UP000092444    UP000092460    UP000092443    UP000002282    UP000192223    UP000009192    UP000008792    UP000007062    UP000007266    UP000001070    UP000075903    UP000075840    UP000075882    UP000037069    UP000007801    UP000001819    UP000095300    UP000092553    UP000007798    UP000268350    UP000000803    UP000095301    UP000001292    UP000075886    UP000075902    UP000000304    UP000008711    UP000019118    UP000192221    UP000069272    UP000245037    UP000076407    UP000015103    UP000075901    UP000075885    UP000000673    UP000075900    UP000075881    UP000075883    UP000069940    UP000249989    UP000007819    UP000092445    UP000078200    UP000075884    UP000009046    UP000288716    UP000285301    UP000005408   

PRIDE

H9JTQ2    Q9W4A9    Q961S1   

Pfam

PF00620   RhoGAP        + More
PF00130   C1_1
PF00017   SH2
PF02033   RBFA

Interpro

IPR000980   SH2        + More
IPR020454   DAG/PE-bd       
IPR000198   RhoGAP_dom       
IPR008936   Rho_GTPase_activation_prot       
IPR036860   SH2_dom_sf       
IPR002219   PE/DAG-bd       
IPR035840   Chimaerin_SH2       
IPR017356   CHN1/CHN2       
IPR037860   RhoGAP_chimaerin       
IPR000742   EGF-like_dom       
IPR013032   EGF-like_CS       
IPR000238   RbfA       
IPR015946   KH_dom-like_a/b       
IPR023799   RbfA_dom_sf       

SUPFAM

SSF55550   SSF55550        + More
SSF48350   SSF48350       
SSF89919   SSF89919       

Gene 3D

1.10.555.10     3.30.505.10     3.30.300.20    

CDD

cd00029  C1
cd10352  SH2_a2chimerin_b2chimerin
cd04372  RhoGAP_chimaerin

ProteinModelPortal

H9JTQ2   A0A212FMI7   A0A437BUH1   A0A0N1PJ62   A0A2H1WFE4   A0A2A4JBL6   + More
A0A2W1BUD8   A0A2J7PWT7   A0A2J7PWS9   A0A067RJP7   A0A1A9WWZ1   A0A084VRD2   A0A1L8DM24   B0WR56   Q16IL8   A0A182J726   A0A1B0CXC0   A0A1B0FKU4   A0A1B0ALM7   A0A1A9X7S6   B4PZN9   A0A1W4W3H2   B4L5Q6   A0A1Y1LJ93   A0A2M3Z7V8   A0A2M4BLX3   A0A2M4AFM5   B4M794   A0A1W4WE34   Q7QDA3   A0A1W4WFC9   D6WRJ7   B4JP00   A0A182UPA9   A0A182HU90   A0A182LFS6   A0A0L0C438   B3MRH8   Q29I99   A0A1I8Q0G7   A0A0K8TMP0   A0A0M4ELS2   B4ND77   A0A1W4WF25   A0A3B0JEJ2   W8BCK8   A0A0A1WWU7   A0A139WFK2   Q9W4A9   A0A1I8N937   A0A034WHT8   A0A336LRB7   B4I0N1   A0A0K8V4H9   A0A182Q834   A0A182TIW2   B4R4Z8   A0A1B6H9W5   B3NV58   N6TWT7   A0A1W4VSE4   A0A182F7E8   A0A2P8YPD2   A0A2J7PWT6   A0A182WRI5   T1ICJ0   A0A182SXF3   A0A0A9XGK7   A0A0K8T210   A0A182PAA2   W5JF93   A0A182RNQ0   A0A182JXU1   A0A182MVL2   A0A069DUF5   A0A182GP74   A0A023F3D4   A0A0V0GB65   A0A2H8TMD2   A0A224XH28   J9K8J3   A0A2S2NZN9   A0A1A9Z4R0   A0A1A9VSH0   A0A182N628   A0A224XH58   E0VD29   A0A1B6DY43   A0A443SP87   A0A147BPU5   A0A131XYT9   Q961S1   A0A3S3RNN8   T1IUY4   A0A131YW05   A0A0Q5T2U6   L7MIT4   A0A1E1XKM8   K1RDE8  

PDB

3CXL     E-value=6.12137e-101,     Score=939

KEGG

101745622    K20630 chimaerin | (RefSeq) beta-chimaerin

GO

GO:0035556   GO:0046872   GO:0051056   GO:0005096   GO:0043408   GO:0007480   GO:0034334   GO:0098609   GO:0048749   GO:0043547   GO:0043087   GO:0016021   GO:0006364   GO:0007165   GO:0006644   GO:0050482   GO:0004222   GO:0016638   GO:0005488   GO:0005515   GO:0009258   GO:0016155   GO:0003824  

Length:

452

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0414

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00733

outside

1  -  452

 

 

Pi

312.942177

Theta

194.460221

Tajima's D

2.535566

CLR

0.058203

CSRT

0.947152642367882

Interpretation

Uncertain