Gene

KWMTBOMO09759

Pre Gene Modal

BGIBMGA012907

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr16(+):8805660-8813385      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.918 Nuclear   Reliability : 1.353

CDS

ATGGCTGCCACTAAATATCTGCACCCGTTTCTCAACGGCTTGAAGCTTTTGCCTGAAGGACATGAGGATGAAGTTCAGCAGATAAGAGAATGGATGAAAAGTCAACCCCACCTGCCGTATATATCGGACGAATACGTATATTTGTTTCTTCACTCAAACTATTACAAAGTGAAAGAGACGAAAGACACAATTGAATGCTACTTCACACTTCGTGGCAACACCCCTGATCTCTTTACGAACAGAGATCCTTTGGCTCCCAAGAATAGAGCTGTTATGGATATTACACAAATGGTAGCACTCCCAAATAAGACAACTGAAGGATATCATGTTCTTCTGTACCGCCTTGCCGACTATGATTATAGTAAGCTAAACTTCGCCGATGCTGTTCGCGTCTTTTGCATGTTCAATGATGTCAAACTCTCAGAGGATAAGCTCTCTGAAGGATACATCGTCATCTTTGACATGAAGGGATGTAGTCTCGGACATTTGACCAGGGTGACCCTGCCGGCGTTGAGAGCTTTCATGCACTACATCCAGAATGCTCATCCGTGTCGTCTAAAGAAGATCCACGTTGTTCACACGGTTTCCTTCATCAACCAGGTCATGTGTCTCGTGAAGCCACTCATACACTCCAATCTGTTGAACCTACTGAATTTCTCTTCGGAAGGCCCCGAATCAGTGGTCGATAAGCAACTCCTACCCGAAGAATTCGGTGGACCGATCGTTCCTGTGAAACAGCTACACGACGAACAGAGGAAGAACATGGAGGAGAACTACAGAGATTGGCTAATAGAAACGGAAATATTTAAAGCGGATGAGAAGAAGAGAATAAAGAAACCAAGTAAAGGGATGTTCGCAAGTTTCACGAGTAGCTTCAAAAGCTTAGAAATAGATTAA

Protein

MAATKYLHPFLNGLKLLPEGHEDEVQQIREWMKSQPHLPYISDEYVYLFLHSNYYKVKETKDTIECYFTLRGNTPDLFTNRDPLAPKNRAVMDITQMVALPNKTTEGYHVLLYRLADYDYSKLNFADAVRVFCMFNDVKLSEDKLSEGYIVIFDMKGCSLGHLTRVTLPALRAFMHYIQNAHPCRLKKIHVVHTVSFINQVMCLVKPLIHSNLLNLLNFSSEGPESVVDKQLLPEEFGGPIVPVKQLHDEQRKNMEENYRDWLIETEIFKADEKKRIKKPSKGMFASFTSSFKSLEID

Uniprot

H9JTP5   A0A0S2Z3D7   A0A2W1C113   A0A0L7LMY9   A0A437BV40   A0A212FMC8   + More
A0A194R6X1   A0A2H4RMP9   A0A194Q1G6   A0A2H4RMW5   A0A2H1V5I9   A0A2A4JGQ4   J3JXS5   A0A182QUC4   A0A182VY11   A0A182IJU1   A0A182R5Q8   W5JB24   A0A182YP37   A0A182LYI0   A0A182TXX4   A0A182WVC3   A0A182LAZ2   Q7QG15   A0A182I904   A0A2M4AYU9   A0A182PKF8   A0A182N4K3   A0A2M4BWZ8   A0A182F947   A0A2M4BW08   A0A182UZY6   Q16RH7   A0A084VZX4   A0A182K9E8   E0W2C7   A0A023ENV8   A0A182H7H8   A0A336K9A5   A0A2M4BUS0   A0A1L8DBN2   A0A1L8DAM2   A0A2P8XI41   A0A1B6KRS7   A0A1B6LW17   A0A1B0CL60   A0A1J1IP62   A0A023F6J1   A0A069DR11   A0A224XH32   A0A0V0G5X2   B0W3K3   A0A1B6DLR3   E0W2C8   A0A1B6LD20   A0A1B6KYX9   A0A1W4X5F9   A0A1Y1JXE4   A0A1B6DYJ3   A0A0P4VRB9   R4G5W8   D6W9C3   A0A1Q3FQZ8   A0A1B6MQ64   A0A1B6DDH3   A0A1B6MKT4   A0A1Y1LMD7   A0A2S2Q3J3   A0A224XHT0   A0A1B6JB60   A0A2J7PS36   A0A023F9V9   A0A154PLP4   A0A0S2Z365   A0A1B6ISW4   T1HQM6   A0A1W4VFQ6   K7ITY7   A0A2S2N8X6   A0A310SB26   A0A0J7NH54   A0A0L0CKW7   T1HWT6   A0A2H8TII4   A0A067R4X7   E2BL70   V9IMD6   A0A151IIH9   A0A1L8DZD6   A0A151WMV2   K7J0H5   A0A0J7KK55   A0A0L7R9L5   A0A0L7R9P5   E2A8R0   B3NXR4   A0A2H4RMS2  

Pubmed

19121390    25684408    28756777    26227816    22118469    26354079    + More
29136137    22516182    20920257    23761445    25244985    20966253    12364791    14747013    17210077    17510324    24438588    20566863    24945155    26483478    29403074    25474469    26334808    28004739    27129103    18362917    19820115    20075255    26108605    24845553    20798317    17994087   

EMBL

BABH01003428    KT943549    ALQ33307.1    KZ149898    PZC78656.1    JTDY01000521    + More
KOB76812.1    RSAL01000008    RVE54009.1    AGBW02007651    OWR54902.1    KQ460878    KPJ11611.1    MG434602    ATY51908.1    KQ459582    KPI98834.1    MG434666    ATY51972.1    ODYU01000795    SOQ36115.1    NWSH01001518    PCG70999.1    BT128046    AEE63007.1    AXCN02000044    ADMH02001893    ETN60608.1    AXCM01013815    AAAB01008844    EAA06063.5    APCN01003147    GGFK01012571    MBW45892.1    GGFJ01008107    MBW57248.1    GGFJ01008108    MBW57249.1    CH477709    EAT37012.1    ATLV01019017    ATLV01019018    KE525259    KFB43518.1    DS235877    EEB19783.1    GAPW01002962    JAC10636.1    JXUM01028264    JXUM01030655    KQ560891    KQ560816    KXJ80465.1    KXJ80771.1    UFQS01000022    UFQT01000022    SSW97610.1    SSX17996.1    GGFJ01007550    MBW56691.1    GFDF01010299    JAV03785.1    GFDF01010667    JAV03417.1    PYGN01002057    PSN31652.1    GEBQ01025852    JAT14125.1    GEBQ01012094    JAT27883.1    AJWK01016944    AJWK01016945    AJWK01016946    AJWK01016947    AJWK01016948    AJWK01016949    CVRI01000057    CRL02023.1    GBBI01001854    JAC16858.1    GBGD01002381    JAC86508.1    GFTR01004631    JAW11795.1    GECL01003431    JAP02693.1    DS231832    EDS31789.1    GEDC01022556    GEDC01010710    GEDC01003689    GEDC01002746    JAS14742.1    JAS26588.1    JAS33609.1    JAS34552.1    EEB19784.1    GEBQ01018603    JAT21374.1    GEBQ01023362    JAT16615.1    GEZM01098136    JAV53982.1    GEDC01006573    JAS30725.1    GDKW01002174    JAI54421.1    GAHY01000155    JAA77355.1    KQ971312    EEZ98182.1    GFDL01005015    JAV30030.1    GEBQ01001890    JAT38087.1    GEDC01013602    JAS23696.1    GEBQ01003498    JAT36479.1    GEZM01051567    JAV74799.1    GGMS01003091    MBY72294.1    GFTR01004381    JAW12045.1    GECU01023166    GECU01011302    JAS84540.1    JAS96404.1    NEVH01021939    PNF19141.1    GBBI01001004    JAC17708.1    KQ434973    KZC12772.1    KT943559    ALQ33317.1    GECU01017682    JAS90024.1    ACPB03026421    GGMR01000597    MBY13216.1    KQ774368    OAD52321.1    LBMM01005052    KMQ91855.1    JRES01000262    KNC32891.1    ACPB03022475    GFXV01002129    MBW13934.1    KK852693    KDR18315.1    GL448949    EFN83556.1    JR052704    AEY61761.1    KQ977477    KYN02476.1    GFDF01002439    JAV11645.1    KQ982934    KYQ49138.1    LBMM01006207    KMQ90808.1    KQ414624    KOC67553.1    KOC67554.1    GL437663    EFN70139.1    CH954180    EDV47365.1    MG434621    ATY51927.1   

Proteomes

UP000005204    UP000037510    UP000283053    UP000007151    UP000053240    UP000053268    + More
UP000218220    UP000075886    UP000075920    UP000075880    UP000075900    UP000000673    UP000076408    UP000075883    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000075885    UP000075884    UP000069272    UP000075903    UP000008820    UP000030765    UP000075881    UP000009046    UP000069940    UP000249989    UP000245037    UP000092461    UP000183832    UP000002320    UP000192223    UP000007266    UP000235965    UP000076502    UP000015103    UP000192221    UP000002358    UP000036403    UP000037069    UP000027135    UP000008237    UP000078542    UP000075809    UP000053825    UP000000311    UP000008711   

PRIDE

H9JTP5   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR001251   CRAL-TRIO_dom        + More
IPR036273   CRAL/TRIO_N_dom_sf       
IPR036865   CRAL-TRIO_dom_sf       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF46938   SSF46938        + More
SSF52087   SSF52087       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9JTP5   A0A0S2Z3D7   A0A2W1C113   A0A0L7LMY9   A0A437BV40   A0A212FMC8   + More
A0A194R6X1   A0A2H4RMP9   A0A194Q1G6   A0A2H4RMW5   A0A2H1V5I9   A0A2A4JGQ4   J3JXS5   A0A182QUC4   A0A182VY11   A0A182IJU1   A0A182R5Q8   W5JB24   A0A182YP37   A0A182LYI0   A0A182TXX4   A0A182WVC3   A0A182LAZ2   Q7QG15   A0A182I904   A0A2M4AYU9   A0A182PKF8   A0A182N4K3   A0A2M4BWZ8   A0A182F947   A0A2M4BW08   A0A182UZY6   Q16RH7   A0A084VZX4   A0A182K9E8   E0W2C7   A0A023ENV8   A0A182H7H8   A0A336K9A5   A0A2M4BUS0   A0A1L8DBN2   A0A1L8DAM2   A0A2P8XI41   A0A1B6KRS7   A0A1B6LW17   A0A1B0CL60   A0A1J1IP62   A0A023F6J1   A0A069DR11   A0A224XH32   A0A0V0G5X2   B0W3K3   A0A1B6DLR3   E0W2C8   A0A1B6LD20   A0A1B6KYX9   A0A1W4X5F9   A0A1Y1JXE4   A0A1B6DYJ3   A0A0P4VRB9   R4G5W8   D6W9C3   A0A1Q3FQZ8   A0A1B6MQ64   A0A1B6DDH3   A0A1B6MKT4   A0A1Y1LMD7   A0A2S2Q3J3   A0A224XHT0   A0A1B6JB60   A0A2J7PS36   A0A023F9V9   A0A154PLP4   A0A0S2Z365   A0A1B6ISW4   T1HQM6   A0A1W4VFQ6   K7ITY7   A0A2S2N8X6   A0A310SB26   A0A0J7NH54   A0A0L0CKW7   T1HWT6   A0A2H8TII4   A0A067R4X7   E2BL70   V9IMD6   A0A151IIH9   A0A1L8DZD6   A0A151WMV2   K7J0H5   A0A0J7KK55   A0A0L7R9L5   A0A0L7R9P5   E2A8R0   B3NXR4   A0A2H4RMS2  

PDB

4CIZ     E-value=3.24173e-10,     Score=155

KEGG

101741307    no KO assigned | (RefSeq) uncharacterized LOC101741307

GO

Length:

298

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02898

Exp number, first 60 AAs:

0.00074

Total prob of N-in:

0.01887

outside

1  -  298

 

 

Pi

296.675396

Theta

157.359206

Tajima's D

2.614728

CLR

0.281698

CSRT

0.953902304884756

Interpretation

Uncertain