Silkworm Genome Informatics Database

Gene

KWMTBOMO09756

Pre Gene Modal

BGIBMGA012906

Annotation

high_choriolytic_enzyme_1_[Danaus_plexippus]

Location

Bomo_Chr16(+):8767271-8774502 View in EpiBrowser

Full name

Metalloendopeptidase

Location in the cell

Nuclear Reliability : 4.065

CDS

ATGAGTTTGAAATGGTCCCTAGGAATCATTCCGTATTATGTCGACCCAGAAAGTTACGATAAAATAATTGAGAATCGAATCCGGTTAGCTATGAAGACAATTGAAAAATCGTCGTGTTTGATTTTCAAACGCTTAAATTCGAAGCCGGCAGATAAGAACTTGTCATGGCTACATTTTACTAACCCTCAGAAGGAGAGAGATTGTACACATCAATTACAAGTCGGAGAATATAAAGAAGTAATAGTAACATTGGGCTTCGAATGTATGCTTCATACGAATATAATGCATTCATTGCTGCACGCCCTCGGCTTTAATGATGAGGTTACGCATCCGCATCGGGATAAATACATTCGAATTTTATGGGAAAACATGCAGCCCAAATATCGACCACTGTTCCTGATGCAAACCGCAAACGAGCCAAACAGACCTGTCGTTGAATACGACCCTCAAAGTGTTATGCACTTCCACGATCGGGCCTTCAGTGTTAATGGCGAAGCTACTATAGCGCCGTTGATTCCCGGAATGATTATAAGATCTGGTGATAAATTATCCCAATTGGATAAAATGAAATTGAAATTGTACTTCACACACGAATGTAACAAGCGAACAGTGGAAGAGCTAATCGATGCTTGCAGGGATATATTGCTGGAAAATGCTGTAGCAGGCAGGCAGCAGGATAAAAACAATTCAACCTATAATAGAGCTACAGATGAAGATGATACAGAGAAAGATAGTGGAAAGTATGAAAGTGAACAAGCAGATGAAAGTGATTATACTAATCGAGGTGATCAATATGCTGATAATATATCTACAAAGGTTAAAGGTGATATACAAAGCAAAGAAGGAAATAGTTACTTAACACAGAAATTTATTAATAAATCTTTGAAAAAAGAAGGAATTAAATAA

Protein

MSLKWSLGIIPYYVDPESYDKIIENRIRLAMKTIEKSSCLIFKRLNSKPADKNLSWLHFTNPQKERDCTHQLQVGEYKEVIVTLGFECMLHTNIMHSLLHALGFNDEVTHPHRDKYIRILWENMQPKYRPLFLMQTANEPNRPVVEYDPQSVMHFHDRAFSVNGEATIAPLIPGMIIRSGDKLSQLDKMKLKLYFTHECNKRTVEELIDACRDILLENAVAGRQQDKNNSTYNRATDEDDTEKDSGKYESEQADESDYTNRGDQYADNISTKVKGDIQSKEGNSYLTQKFINKSLKKEGIK

Cofactor

Zn(2+)

Feature

chain Metalloendopeptidase

Uniprot

A0A212FMB4 A0A194PZS6 A0A437BU75 A0A2A4K3Y9 A0A194R1E2 A0A194R1P7 + More
A0A2A4K3I9 A0A2W1BYC2 A0A2H1WVK9 A0A212FMD9 Q29FZ0 B4H7F8 A0A437BWN8 B3NUM3 B4PWD6 W4XL36 A0A0K0EPC5 A0A2A2KKT8 E1ZW79 A0A151WSE0 A0A2A4K808

EC Number

3.4.24.-

Pubmed

22118469 26354079 28756777 15632085 17994087 17550304 + More
20798317

EMBL

AGBW02007651 OWR54904.1 KQ459582 KPI98832.1 RSAL01000008 RVE54013.1 + More
NWSH01000188 PCG78618.1 KQ460878 KPJ11613.1 KPJ11612.1 PCG78619.1 KZ149898 PZC78655.1 ODYU01011386 SOQ57103.1 OWR54903.1 CH379065 EAL31439.2 CH479218 EDW33769.1 RSAL01000004 RVE54661.1 CH954180 EDV46620.1 CM000162 EDX02754.1 AAGJ04140010 LIAE01008309 PAV74656.1 GL434776 EFN74588.1 KQ982776 KYQ50764.1 NWSH01000058 PCG80078.1

Proteomes

UP000007151 UP000053268 UP000283053 UP000218220 UP000053240 UP000001819 + More
UP000008744 UP000008711 UP000002282 UP000007110 UP000035681 UP000218231 UP000000311 UP000075809

Pfam

PF01400   Astacin        + More
PF00431   CUB
PF01549   ShK

Interpro

IPR024079   MetalloPept_cat_dom_sf        + More
IPR001506   Peptidase_M12A
IPR006026   Peptidase_Metallo
IPR033957   NAS-36
IPR034035   Astacin-like_dom
IPR000859   CUB_dom
IPR035914   Sperma_CUB_dom_sf
IPR017050   Metallopeptidase_nem
IPR003582   ShKT_dom

SUPFAM

SSF49854 SSF49854

Gene 3D

3.40.390.10 2.60.120.290

CDD

cd04280 ZnMc_astacin_like
cd00041 CUB

ProteinModelPortal

A0A212FMB4 A0A194PZS6 A0A437BU75 A0A2A4K3Y9 A0A194R1E2 A0A194R1P7 + More
A0A2A4K3I9 A0A2W1BYC2 A0A2H1WVK9 A0A212FMD9 Q29FZ0 B4H7F8 A0A437BWN8 B3NUM3 B4PWD6 W4XL36 A0A0K0EPC5 A0A2A2KKT8 E1ZW79 A0A151WSE0 A0A2A4K808

PDB

3VTG E-value=6.36204e-12, Score=169

KEGG

101739924 K23505 complex I assembly factor TIMMDC1 | (RefSeq) RPII140-upstream gene protein

GO

GO:0004222 GO:0008270 GO:0046872 GO:0018996 GO:0006508 GO:0008237 GO:0016638 GO:0005488 GO:0005515 GO:0009258 GO:0016155 GO:0003824

PANTHER

PTHR10127:SF840

Length:

301

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01639

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00957

outside

1 - 301

Pi

204.126127

Theta

176.399889

Tajima's D

0.916428

CLR

0.244593

CSRT

0.637418129093545

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics