Gene

KWMTBOMO09754  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012905

Annotation

RAN_binding_protein_[Bombyx_mori]

Location

Bomo_Chr16(+):8753891-8757204      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.082

CDS

ATGTCGTCTCCATGTGAAGAAAGCGTGCGTCGAAACAGTGAGAGCGAAAGTGGAGATCCAGAAGCTACGGAACATGATCCACACTTCGAACCCATCGTATCTTTGCCCCTGGTAGATATTCAGACTCACGAAGAAGATGAAGAGGAGCTGGCAAAGATACGAGCTCGTCTTTATCGCTACGACACCGGCGATCATGAGTGGAAAGAAAGAGGTACAGGTGACGTTAAACTTCTTCGTCACAAACTGAACAACACTGTGCGGGTTGTAATGAGGAGAGATAAGACTCTGAAAGTATGCGCTAATCATTTCATTACCCCAGATATTAGAATGAATGTACATTGTGGATCCGATAGAGCATTCAACTGGTCTGTATTTGCTGATTATGCTGATGAGACATGCAAACAAGAATTGCTGGCTATTAAGTTTGGAAACCCTCAGAATGCCGAACTATGGAAGGCAAAGTTTGCAGAAGCTCAGGAAATAGTGAGGACAAAATGTAGTCTTTATTGTCAGGATCAGTCATCTGATGATGAAAGCAGTATAACTAGAAGTGAGGATACTGACACACCTGAACCAAAGAGTACTGAAAAGTCTTCAATAAATGAAAAATCGGACAAAGATGATGAGACAGACTCCGATGGTGTAGTACTAAAGCTTAAGGAATTGAAAGTTGAAAACAAAAAATCAGATTAG

Protein

MSSPCEESVRRNSESESGDPEATEHDPHFEPIVSLPLVDIQTHEEDEEELAKIRARLYRYDTGDHEWKERGTGDVKLLRHKLNNTVRVVMRRDKTLKVCANHFITPDIRMNVHCGSDRAFNWSVFADYADETCKQELLAIKFGNPQNAELWKAKFAEAQEIVRTKCSLYCQDQSSDDESSITRSEDTDTPEPKSTEKSSINEKSDKDDETDSDGVVLKLKELKVENKKSD

Uniprot

H9JTP3   Q1HQ76   A0A194Q5Z7   A0A437BUH6   A0A1E1WDC1   A0A2A4K3K8   + More
A0A194R2Z5   A0A212FMF0   A0A2W1C3B6   A0A2H1WVM0   S4NJ62   K7IS59   A0A232F4A4   E2AAH0   A0A088AV12   V9IMS4   A0A2A3ESV1   A0A0N0U3F1   A0A1B6GUJ7   A0A2J7PX47   A0A0T6B137   A0A0P5K254   H2UBX7   A0A0P5SDZ6   A0A0P6FAH4   A0A0P6FAZ8   A0A0P6F6P1   A0A0P6EB62   A0A0P5UNZ6   A0A0P5PEB8   A0A0N8BHU8   A0A1A7WXQ8   A0A0P5IS26   G3PHQ3   A0A1A8GSK0   A0A0P5Q0B1   G3PHQ9   A0A0P6BPJ4   A0A0P4YQ10   Q4RPI2   A0A401NYD2   A0A0P5ETN2   H3DH78   A0A3Q2XQ38  

Pubmed

19121390    26354079    22118469    28756777    23622113    20075255    + More
28648823    20798317    21551351    15496914    30297745   

EMBL

BABH01003432    DQ443176    ABF51265.1    KQ459582    KPI98830.1    RSAL01000008    + More
RVE54015.1    GDQN01006088    JAT84966.1    NWSH01000188    PCG78616.1    KQ460878    KPJ11615.1    AGBW02007651    OWR54906.1    KZ149898    PZC78653.1    ODYU01011386    SOQ57098.1    GAIX01013809    JAA78751.1    NNAY01001062    OXU25283.1    GL438125    EFN69571.1    JR053906    AEY62041.1    KZ288192    PBC34219.1    KQ435883    KOX69702.1    GECZ01003655    JAS66114.1    NEVH01020862    PNF20899.1    LJIG01016264    KRT81123.1    GDIQ01192022    JAK59703.1    GDIQ01093113    GDIQ01046883    JAL58613.1    GDIQ01063226    JAN31511.1    GDIQ01066078    GDIQ01046884    JAN28659.1    GDIQ01064726    JAN30011.1    GDIQ01066077    JAN28660.1    GDIP01127808    JAL75906.1    GDIQ01129801    JAL21925.1    GDIQ01176275    JAK75450.1    HADW01009075    HADX01001023    SBP10475.1    GDIQ01234512    JAK17213.1    HAEB01020591    HAEC01006070    SBQ74147.1    GDIQ01120951    JAL30775.1    GDIP01018229    JAM85486.1    GDIP01224450    JAI98951.1    CAAE01015007    CAG09700.1    BFAA01001467    GCB65865.1    GDIQ01265181    JAJ86543.1   

Proteomes

UP000005204    UP000053268    UP000283053    UP000218220    UP000053240    UP000007151    + More
UP000002358    UP000215335    UP000000311    UP000005203    UP000242457    UP000053105    UP000235965    UP000005226    UP000007635    UP000288216    UP000007303    UP000264820   

PRIDE

H9JTP3    Q1HQ76   

Pfam

PF00638   Ran_BP1

Interpro

IPR000697   WH1/EVH1_dom        + More
IPR011993   PH-like_dom_sf       
IPR000156   Ran_bind_dom       

Gene 3D

2.30.29.30    

ProteinModelPortal

H9JTP3   Q1HQ76   A0A194Q5Z7   A0A437BUH6   A0A1E1WDC1   A0A2A4K3K8   + More
A0A194R2Z5   A0A212FMF0   A0A2W1C3B6   A0A2H1WVM0   S4NJ62   K7IS59   A0A232F4A4   E2AAH0   A0A088AV12   V9IMS4   A0A2A3ESV1   A0A0N0U3F1   A0A1B6GUJ7   A0A2J7PX47   A0A0T6B137   A0A0P5K254   H2UBX7   A0A0P5SDZ6   A0A0P6FAH4   A0A0P6FAZ8   A0A0P6F6P1   A0A0P6EB62   A0A0P5UNZ6   A0A0P5PEB8   A0A0N8BHU8   A0A1A7WXQ8   A0A0P5IS26   G3PHQ3   A0A1A8GSK0   A0A0P5Q0B1   G3PHQ9   A0A0P6BPJ4   A0A0P4YQ10   Q4RPI2   A0A401NYD2   A0A0P5ETN2   H3DH78   A0A3Q2XQ38  

PDB

5CLQ     E-value=8.92396e-37,     Score=382

KEGG

732903    K15306 Ran-binding protein 1 | (RefSeq) RAN binding protein

GO

GO:0005623   GO:0046907   GO:0016021   GO:0007264   GO:0010181   GO:0016491   GO:0016638   GO:0005488   GO:0005515   GO:0009258   GO:0016155   GO:0003824  

Length:

230

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05740

outside

1  -  230

 

 

Pi

336.140372

Theta

233.560056

Tajima's D

1.362744

CLR

0

CSRT

0.75701214939253

Interpretation

Uncertain