Gene

KWMTBOMO09752  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012904

Annotation

PREDICTED:_ras-related_protein_Rab-35_[Papilio_polytes]

Location

Bomo_Chr16(+):8717981-8727618      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.829 Nuclear   Reliability : 2.049

CDS

ATGCGCAACCAAGAAAGTGACAGTATGGCGCGCGAGTTCGATCATCTTTTCAAACTGCTGATTATCGGTGACAGCGGTGTCGGAAAGAGTTGTCTTCTCCTGCGTTTTGCGGACAACACATTTTCTGGTAGTTATATTACAACTATAGGGGTGGATTTCAAAATAAGAACTTTAGAAGTTAATGGAGAGAAAGTGAAACTACAGATTTGGGATACAGCGGGACAGGAGAGGTTCAGAACAATTACAAGTACCTACTACCGAGGGACTCACGGAGTCATCGTCGTGTACGATGTTACCAATGGAGAGTCTTTCGCTAATGTCAAGAGATGGCTTCATGAAATTGAACAGAACTGCGATGTTGTAAACAAAGTTCTAGTTGGAAATAAAAATGATTGTCCGTCACGCAAAGTTGTGGTTACAGAGGATGCTCAGAGGTTTGCCAGTCAGATGAATATCCCTCTGTTTGAAACTAGTGCAAAAGAAAACATTAATGTAGAGGAGATGTTCCTTACAATTACAAAAATGGTACTAAAATCCAAATTAGAAATGAAAGAGAGACAGAACGTTACATCAAACGACACAGTTAATTTGAAGAAAGGTAATCACAAAATTAAAAAAAAGTGTTGCTAG

Protein

MRNQESDSMAREFDHLFKLLIIGDSGVGKSCLLLRFADNTFSGSYITTIGVDFKIRTLEVNGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCDVVNKVLVGNKNDCPSRKVVVTEDAQRFASQMNIPLFETSAKENINVEEMFLTITKMVLKSKLEMKERQNVTSNDTVNLKKGNHKIKKKCC

Uniprot

H9JTP2   A0A194R1E6   A0A194PZS8   A0A212FMD5   A0A437BU69   A0A2A4K4P9   + More
A0A2W1BWC7   A0A2H1V4Y7   S4PFE8   D2A4S3   A0A1Y1KSH6   A0A1W4XII1   A0A2J7RM84   A0A067RRQ0   F4W6H1   A0A195AW49   A0A158P280   L7M557   A0A1E1WXA6   A0A023FFF0   A0A131XQM5   E2AJW6   A0A023GJ30   A0A131YYE6   A0A2R7X3U1   A0A0M9A1G0   A0A0P4VSD8   R4FN30   A0A2A3E730   A0A088A7M1   A0A1B6G891   A0A1B6JLG0   B7P283   V5I4Q0   A0A224XX40   A0A0V0G6P1   A0A069DPB8   A0A293MVN7   A0A2R5LIC1   A0A087U0M9   A0A1B6M0F0   N6T4J1   A0A2S2R6M6   A0A1Z5L5K8   J9JU92   A0A0P4VVM6   T1JP21   K7J3H6   A0A2H8TG39   A0A2S2PF30   A0A023EI82   Q1HQU3   A0A165VFQ6   A0A087UJN3   U5EXH4   A0A0A9Z7W3   A0A444T1Z2   A0A1Q3FBH6   R7V0T4   A0A1B6DX90   A0A3S3QCZ9   A0A1S3JLM7   B6RB76   D2DSN6   A0A2P2HZH6   A0A2M4AM21   T1DQN4   A0A2M3Z665   A0A1B0CXB7   T1D4W6   C3Z473   V4AUD5   A0A1A9W9Z8   A0A2C9JW64   B0X5L3   A0A1I8QBL6   A0A1S4FZL3   A0A1I8MGQ6   A0A1A9X7S5   A0A1A9ULG8   A0A1B0ALM3   A0A1B0AIW7   D3TP47   E9GFH0   W5JHG8   A0A0P5ZIH4   A0A226E652   A0A2C9JW61   A0A0K8TNI6   B3MQJ0   A0A1J1IGN5   A0A182MFQ4   A0A182RNP9   A0A182WRI4   A0A182PAA3   A0A182UXB2   A0A182LFS1   Q7QDA4   A0A182HU93   A0A0L0BSD1  

Pubmed

19121390    26354079    22118469    28756777    23622113    18362917    + More
19820115    28004739    24845553    21719571    21347285    25576852    28503490    28049606    20798317    26830274    27129103    25765539    26334808    23537049    28528879    20075255    24945155    26483478    17204158    17510324    25401762    23254933    24330624    18563158    15562597    25315136    20353571    21292972    20920257    23761445    26369729    17994087    20966253    12364791    14747013    17210077    26108605   

EMBL

BABH01003433    BABH01003434    BABH01003435    KQ460878    KPJ11618.1    KQ459582    + More
KPI98826.1    AGBW02007651    OWR54908.1    RSAL01000008    RVE54018.1    NWSH01000188    PCG78630.1    KZ149898    PZC78651.1    ODYU01000678    SOQ35859.1    GAIX01004042    JAA88518.1    KQ971344    EFA05261.1    GEZM01075096    JAV64284.1    NEVH01002568    PNF41955.1    KK852507    KDR22454.1    GL887707    EGI70306.1    KQ976731    KYM76189.1    ADTU01007009    GACK01006037    JAA58997.1    GFAC01007566    JAT91622.1    GBBK01003796    JAC20686.1    GEFH01000106    JAP68475.1    GL440100    EFN66282.1    GBBM01002633    JAC32785.1    GEDV01004354    JAP84203.1    KK856824    PTY26452.1    KQ435789    KOX74446.1    GDKW01001101    JAI55494.1    ACPB03010746    GAHY01000728    JAA76782.1    KZ288347    PBC27573.1    GECZ01011276    JAS58493.1    GECU01007605    JAT00102.1    ABJB010818234    DS620852    EEC00705.1    GADI01003626    GANP01001060    GEFM01006101    JAA70182.1    JAB83408.1    JAP69695.1    GFTR01003334    JAW13092.1    GECL01002346    JAP03778.1    GBGD01003006    JAC85883.1    GFWV01020166    MAA44894.1    GGLE01005113    MBY09239.1    KK117600    KFM70918.1    GEBQ01010565    JAT29412.1    APGK01044205    KB741021    KB632003    ENN75044.1    ERL87820.1    GGMS01016483    MBY85686.1    GFJQ02004267    JAW02703.1    ABLF02025351    GDRN01137252    JAI56658.1    JH431806    GFXV01000887    MBW12692.1    GGMR01015442    MBY28061.1    JXUM01141725    JXUM01141726    JXUM01141727    GAPW01004500    KQ569295    JAC09098.1    KXJ68675.1    DQ440351    CH478071    ABF18384.1    EAT34116.1    KT984791    AMZ00343.1    KK120127    KFM77572.1    GANO01000953    JAB58918.1    GBHO01003608    JAG39996.1    SAUD01015082    RXG59657.1    GFDL01010119    JAV24926.1    AMQN01006223    KB297895    ELU09827.1    GEDC01028974    GEDC01007012    JAS08324.1    JAS30286.1    NCKU01000034    RWS17794.1    EF103422    ABO26680.1    FJ774725    ACY66447.1    IACF01001464    LAB67163.1    GGFK01008337    MBW41658.1    GAMD01002364    JAA99226.1    GGFM01003233    MBW23984.1    AJWK01033520    GALA01000803    JAA94049.1    GG666578    EEN52686.1    KB201305    ESO97361.1    DS232386    EDS40950.1    JXJN01000024    CCAG010022741    EZ423199    ADD19475.1    GL732542    EFX81636.1    ADMH02001371    ETN62758.1    GDIQ01209726    GDIP01043974    GDIQ01056282    LRGB01000389    JAK41999.1    JAM59741.1    KZS19367.1    LNIX01000006    OXA52808.1    GDAI01001674    JAI15929.1    CH902621    EDV44616.2    CVRI01000047    CRK98206.1    AXCM01001083    AAAB01008859    EAA07904.5    APCN01000613    JRES01001442    KNC22883.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000283053    UP000218220    + More
UP000007266    UP000192223    UP000235965    UP000027135    UP000007755    UP000078540    UP000005205    UP000000311    UP000053105    UP000015103    UP000242457    UP000005203    UP000001555    UP000054359    UP000019118    UP000030742    UP000007819    UP000002358    UP000069940    UP000249989    UP000008820    UP000288706    UP000014760    UP000285301    UP000085678    UP000092461    UP000001554    UP000030746    UP000091820    UP000076420    UP000002320    UP000095300    UP000095301    UP000092443    UP000078200    UP000092460    UP000092445    UP000092444    UP000000305    UP000000673    UP000076858    UP000198287    UP000007801    UP000183832    UP000075883    UP000075900    UP000076407    UP000075885    UP000075903    UP000075882    UP000007062    UP000075840    UP000037069   

PRIDE

H9JTP2    L7M557    V5I4Q0   

Pfam

PF00071   Ras        + More
PF05365   UCR_UQCRX_QCR9

Interpro

IPR008027   QCR9        + More
IPR005225   Small_GTP-bd_dom       
IPR036656   QCR9_sf       
IPR027417   P-loop_NTPase       
IPR001806   Small_GTPase       
IPR041815   Rab35       

SUPFAM

SSF52540   SSF52540        + More
SSF81514   SSF81514       

Gene 3D

1.20.5.260    

CDD

cd04110  Rab35

ProteinModelPortal

H9JTP2   A0A194R1E6   A0A194PZS8   A0A212FMD5   A0A437BU69   A0A2A4K4P9   + More
A0A2W1BWC7   A0A2H1V4Y7   S4PFE8   D2A4S3   A0A1Y1KSH6   A0A1W4XII1   A0A2J7RM84   A0A067RRQ0   F4W6H1   A0A195AW49   A0A158P280   L7M557   A0A1E1WXA6   A0A023FFF0   A0A131XQM5   E2AJW6   A0A023GJ30   A0A131YYE6   A0A2R7X3U1   A0A0M9A1G0   A0A0P4VSD8   R4FN30   A0A2A3E730   A0A088A7M1   A0A1B6G891   A0A1B6JLG0   B7P283   V5I4Q0   A0A224XX40   A0A0V0G6P1   A0A069DPB8   A0A293MVN7   A0A2R5LIC1   A0A087U0M9   A0A1B6M0F0   N6T4J1   A0A2S2R6M6   A0A1Z5L5K8   J9JU92   A0A0P4VVM6   T1JP21   K7J3H6   A0A2H8TG39   A0A2S2PF30   A0A023EI82   Q1HQU3   A0A165VFQ6   A0A087UJN3   U5EXH4   A0A0A9Z7W3   A0A444T1Z2   A0A1Q3FBH6   R7V0T4   A0A1B6DX90   A0A3S3QCZ9   A0A1S3JLM7   B6RB76   D2DSN6   A0A2P2HZH6   A0A2M4AM21   T1DQN4   A0A2M3Z665   A0A1B0CXB7   T1D4W6   C3Z473   V4AUD5   A0A1A9W9Z8   A0A2C9JW64   B0X5L3   A0A1I8QBL6   A0A1S4FZL3   A0A1I8MGQ6   A0A1A9X7S5   A0A1A9ULG8   A0A1B0ALM3   A0A1B0AIW7   D3TP47   E9GFH0   W5JHG8   A0A0P5ZIH4   A0A226E652   A0A2C9JW61   A0A0K8TNI6   B3MQJ0   A0A1J1IGN5   A0A182MFQ4   A0A182RNP9   A0A182WRI4   A0A182PAA3   A0A182UXB2   A0A182LFS1   Q7QDA4   A0A182HU93   A0A0L0BSD1  

PDB

3TW8     E-value=4.26433e-78,     Score=738

KEGG

101741967    K07876 Ras-related protein Rab-35 | (RefSeq) ras-related protein Rab-35

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0005525   GO:0005750   GO:0006122   GO:0003924   GO:0010008   GO:0032482   GO:0000139   GO:0032456   GO:0006886   GO:0005886   GO:0004767   GO:0045176   GO:0051491   GO:0000281   GO:0030175   GO:0098592   GO:0070381   GO:1904951   GO:0061803   GO:0048227   GO:0110074   GO:0030027   GO:0061802   GO:0035149   GO:0010085   GO:0060097   GO:0099638   GO:1990182   GO:0016476   GO:0007264   GO:0010181   GO:0016491   GO:0016638   GO:0005488   GO:0005515   GO:0009258   GO:0016155   GO:0003824  

Length:

209

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.14603

Exp number, first 60 AAs:

0.14053

Total prob of N-in:

0.27514

outside

1  -  209

 

 

Pi

146.597244

Theta

16.971257

Tajima's D

0.640026

CLR

0.546755

CSRT

0.554422278886056

Interpretation

Uncertain