Silkworm Genome Informatics Database

Gene

KWMTBOMO09751

Pre Gene Modal

BGIBMGA009703

Annotation

PREDICTED:_uncharacterized_protein_LOC105842068_[Bombyx_mori]

Location

Bomo_Chr16(-):8712383-8713110 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.264

CDS

ATGGAGAAAACGAGAGCCTTGCTTTTGGATGGAGCTGTACCCAAATATCTCTGGGGAGAAGCATTACTAACAGCTAGCTTCTTATTAAACCGATGTCCAACAAAAGGAAAAAATAAAACTCCTGCGGAATTGTGGTTTGGAATAAAACCAGATGTTTCAAATATTCGAAGATTTGGCTCAACTACATATTTTAAAATAAATTCTGGACTAAAAAAGCTTGATGATCGTTGTAAAAAGGGTATTCTGGTTGGCTACGTAAGAAACGGTTATAAAATTTGGGTTGAAGATGAACAAAAAATTATACGAGCAAGGGATGTAAGAATTAATGAGGGAGAACAAGGAATTCTAGGTGGATACTTAGAAGATAATGAAGTAATTAATGGGCTTTGGGGTGATGAAAGGGAGAACACTAATAGAAATAACACAAATGAAAATAATCGTGCAGATGATGAAGTCAGAGAAGTTCGAGAAGGTGATTTTAGAGGAAATAATAGTAATGAAGGTAATGAAGTTCGAGAAGGTGAAATAGGAAGAAATGGAGAGTTAGTGGAGTTCGAGAAGGTGATATTTGAGGAAATAATAGTAATAAAGTAG

Protein

MEKTRALLLDGAVPKYLWGEALLTASFLLNRCPTKGKNKTPAELWFGIKPDVSNIRRFGSTTYFKINSGLKKLDDRCKKGILVGYVRNGYKIWVEDEQKIIRARDVRINEGEQGILGGYLEDNEVINGLWGDERENTNRNNTNENNRADDEVREVREGDFRGNNSNEGNEVREGEIGRNGELVEFEKVIFEEIIVIK

Uniprot

A0A0V0G477

EMBL

GECL01003258 JAP02866.1

Pfam

PF13976   gag_pre-integrs        + More
PF07727   RVT_2
PF00665   rve

Interpro

IPR025724   GAG-pre-integrase_dom        + More
IPR036397   RNaseH_sf
IPR001584   Integrase_cat-core
IPR039537   Retrotran_Ty1/copia-like
IPR013103   RVT_2
IPR012337   RNaseH-like_sf
IPR036875   Znf_CCHC_sf
IPR001878   Znf_CCHC

SUPFAM

SSF53098 SSF53098 + More
SSF57756 SSF57756

Gene 3D

3.30.420.10

ProteinModelPortal

A0A0V0G477

KEGG

105842068 no KO assigned | (RefSeq) uncharacterized LOC105842068

GO

GO:0000943 GO:0015074 GO:0008270 GO:0003676 GO:0008615 GO:0010181 GO:0016491 GO:0016638 GO:0005488 GO:0005515 GO:0009258 GO:0016155 GO:0003824

PANTHER

PTHR11439

Length:

197

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.2441

Exp number, first 60 AAs:

0.2441

Total prob of N-in:

0.07769

outside

1 - 197

Pi

290.499137

Theta

172.753705

Tajima's D

2.144054

CLR

0

CSRT

0.903454827258637

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree