Gene

KWMTBOMO09750  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012934

Annotation

PREDICTED:_pyridoxine-5'-phosphate_oxidase-like_[Bombyx_mori]

Location

Bomo_Chr16(-):8706636-8709560      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.486

CDS

ATGTTTCATTTACCGAAAGCTGTCACATACACTTGCACTATGAGTATTGGTATTGGTGGTATGAGAAATTGCGATACCTATAAAAATGGGGCGTTTCTAGAAAAATCAGTGACATGGAAAGAGCCGTTTGGACAATTCAAATGTTGGTTTGAAGAAGCTCGCGCTACGAAAAAGATTCTGGAGCCCAGTGCAATGTGTCTAGCCACAGTTTCACAGGAGGGTTTTCCGTCAGCCCGATTTGTATTGTGTAAGGGTTATGGTAAAGAAGGATTCAAATTCTACACAAATTATGGAAGTAAAAAAGCTAAAGACATAGAAGGGAATCCTAATGTTGCTGCTACGTTTTATTGGGATATCCTGAACAGATCGGTGAGGATTGAAGGCACAGTCGAGAAACTCTCAGAAGCTGAAAATTTAAAATACTTTCGCACACGTGCAGTGGCCAATCAGATAGCAGCATGTACGAGCTACCAAAGTACACCGATAGTTTCTAAAGATATCCTATGTCAAAGGCAAAAGGTTCTTGAGCAAGAATATCTGATACCTGGGAAAGAAGTCCCAAAACCAAGTAACTGGGGAGGATACCTCTTAGTTCCTAGGTCCGTTGAATTCTGGCAGGGTCATAATGACAGATTTCATGATCGCATAAAATACAGAAGACCATACAAAGGGGAAGTGCCAGATCAAAAACTATTGCACGAAGGCGAAGGTGGGTGGGTTATCGAGAGACTTTCGCCATAA

Protein

MFHLPKAVTYTCTMSIGIGGMRNCDTYKNGAFLEKSVTWKEPFGQFKCWFEEARATKKILEPSAMCLATVSQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYWDILNRSVRIEGTVEKLSEAENLKYFRTRAVANQIAACTSYQSTPIVSKDILCQRQKVLEQEYLIPGKEVPKPSNWGGYLLVPRSVEFWQGHNDRFHDRIKYRRPYKGEVPDQKLLHEGEGGWVIERLSP

Uniprot

Q1PCB0   H9JTS2   A0A2H1WU83   A0A2A4J026   A0A194RCQ5   I4DKY9   + More
A0A194PXE1   S4PS64   A0A437BGB8   A0A0L7LJZ2   A0A212EHZ8   A0A212EHZ5   A0A1B6BY41   A0A1Y1M739   A0A1B6J6U3   A0A1Y1M6Z0   A0A3R7PCX9   A0A151IZZ7   A0A2J7PGW7   A0A026W5Y4   A0A232FAI2   A0A195FNP1   E0VFZ8   A0A195B4Q7   A0A2G8JPJ8   A0A0P4VZY2   A0A1D2NK98   A0A2P2I342   A0A158NQ60   E2AIC3   T1J8D0   A0A0P4W5N0   H3AEB3   B0X0U6   J3JWS8   A0A0M8ZT79   C3YBZ9   F4WMQ6   A0A1D2M0K6   A0A0L0CE76   X1Z5D6   A0A1B6MF52   A0A226EEP0   A0A1Q3FH08   U4U7K8   A0A034WY02   A0A0C9PXI5   A0A034WWD2   A0A034WSX9   A0A154P5Q6   A0A2A3EK58   A0A182FSY6   A0A2M4CTN6   A0A336M7R7   T1E7V1   A0A2M4APJ2   A0A182VJ56   Q7QK95   A0A182HZI6   A0A182LQI5   A0A182NZE8   E9HCR8   A0A182X375   A0A2M4CU56   Q17HC0   A0A182HCG5   A0A0C9RCS1   A0A2M4BYL7   Q1HQV7   A0A2M4BYT9   A0A088A8V8   A0A084VX03   U5EHA4   A0A139WC72   E2C0I9   A0A0K8W6N7   A0A0K8UCQ1   A0A0P6IIY3   A0A0P5A7D0   A0A182JD03   A0A2P8XHQ6   A0A0P6DFV2   A0A182HCF9   A0A182NMR5   V9KUI5   A0A1L8EIF4   A0A2H8U0M8   A0A0A1WG02   A0A2C9KS20   A0A401PDD3   W4Y0A9   A0A182Q9T7   A0A1D1VFP1   A0A1I8PNM5   B4R0A1   S4RPV4   B4N8C2   A0A1S3KHA6   A0A0Q9WV97   A0A2C9KS55  

Pubmed

19121390    26354079    22651552    23622113    26227816    22118469    + More
28004739    24508170    30249741    28648823    20566863    29023486    27289101    21347285    20798317    9215903    22516182    23537049    18563158    21719571    26108605    23254933    25348373    12364791    14747013    17210077    20966253    21292972    17510324    26483478    17204158    24438588    18362917    19820115    29403074    24402279    25830018    15562597    30297745    27649274    17994087    26383154   

EMBL

BABH01013608    DQ452398    ABE28379.1    BABH01003437    BABH01003438    ODYU01011099    + More
SOQ56625.1    NWSH01004148    PCG65425.1    KQ460397    KPJ15254.1    AK401957    BAM18579.1    KQ459589    KPI97688.1    GAIX01014123    JAA78437.1    RSAL01000063    RVE49486.1    JTDY01000856    KOB75659.1    AGBW02014758    OWR41109.1    OWR41108.1    GEDC01031423    GEDC01003743    JAS05875.1    JAS33555.1    GEZM01038723    JAV81543.1    GECU01012817    JAS94889.1    GEZM01038724    JAV81542.1    QCYY01002868    ROT66995.1    KQ980658    KYN14759.1    NEVH01025161    PNF15571.1    KK107455    QOIP01000010    EZA50449.1    RLU17344.1    NNAY01000601    OXU27448.1    KQ981382    KYN42170.1    DS235129    EEB12304.1    KQ976618    KYM79252.1    MRZV01001469    PIK37677.1    GDRN01099300    JAI58795.1    LJIJ01000021    ODN05535.1    IACF01002803    LAB68442.1    ADTU01022976    GL439754    EFN66834.1    JH431954    GDRN01099303    GDRN01099298    GDRN01099297    JAI58794.1    AFYH01022985    AFYH01022986    AFYH01022987    DS232246    EDS38338.1    APGK01029461    BT127696    KB740735    AEE62658.1    ENN79138.1    KQ435855    KOX70645.1    GG666499    EEN62174.1    GL888218    EGI64533.1    LJIJ01008633    ODM75294.1    JRES01000503    KNC30546.1    AMQN01000089    GEBQ01005417    JAT34560.1    LNIX01000004    OXA55859.1    GFDL01008208    JAV26837.1    KB632136    ERL89052.1    GAKP01000289    JAC58663.1    GBYB01006208    JAG75975.1    GAKP01000290    JAC58662.1    GAKP01000291    JAC58661.1    KQ434822    KZC07183.1    KZ288230    PBC31642.1    GGFL01004534    MBW68712.1    UFQS01000671    UFQT01000671    SSX06005.1    SSX26362.1    GAMD01002732    JAA98858.1    GGFK01009390    MBW42711.1    AAAB01008799    EAA03810.5    APCN01001980    GL732621    EFX70395.1    GGFL01004533    MBW68711.1    CH477250    EAT46086.1    JXUM01033244    KQ560982    KXJ80141.1    GBYB01001345    GBYB01001346    GBYB01004701    GBYB01012013    JAG71112.1    JAG71113.1    JAG74468.1    JAG81780.1    GGFJ01008870    MBW58011.1    DQ440337    ABF18370.1    GGFJ01008940    MBW58081.1    ATLV01017821    KE525194    KFB42497.1    GANO01003111    JAB56760.1    KQ971372    KYB25431.1    GL451797    EFN78548.1    GDHF01005538    JAI46776.1    GDHF01027900    JAI24414.1    GDIQ01021155    JAN73582.1    GDIP01207446    JAJ15956.1    PYGN01002094    PSN31522.1    GDIQ01077968    JAN16769.1    JXUM01033235    JXUM01033236    JXUM01033237    KXJ80135.1    JW869691    AFP02209.1    GFDG01000410    JAV18389.1    GFXV01007557    MBW19362.1    GBXI01016984    JAC97307.1    BFAA01001886    GCB71125.1    AAGJ04138504    AXCN02001209    BDGG01000005    GAU99750.1    CM000364    EDX12026.1    CH964232    EDW81373.1    KRF99432.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000283053    UP000037510    + More
UP000007151    UP000283509    UP000078492    UP000235965    UP000053097    UP000279307    UP000215335    UP000078541    UP000009046    UP000078540    UP000230750    UP000094527    UP000005205    UP000000311    UP000008672    UP000002320    UP000019118    UP000053105    UP000001554    UP000007755    UP000037069    UP000198287    UP000030742    UP000076502    UP000242457    UP000069272    UP000075903    UP000007062    UP000075840    UP000075882    UP000075885    UP000000305    UP000076407    UP000008820    UP000069940    UP000249989    UP000005203    UP000030765    UP000007266    UP000008237    UP000075880    UP000245037    UP000075884    UP000076420    UP000288216    UP000007110    UP000075886    UP000186922    UP000095300    UP000000304    UP000245300    UP000007798    UP000085678   

PRIDE

Q1PCB0    H9JTS2   

Pfam

PF01243   Putative_PNPOx        + More
PF10590   PNP_phzG_C
PF05856   ARPC4

Interpro

IPR019576   Pyridoxamine_oxidase_dimer_C        + More
IPR012349   Split_barrel_FMN-bd       
IPR000659   Pyridox_Oxase       
IPR011576   Pyridox_Oxase_put       
IPR019740   Pyridox_Oxase_CS       
IPR008384   ARPC4       
IPR034666   ARPC2/4       

SUPFAM

SSF69645   SSF69645       

Gene 3D

2.30.110.10     3.30.1460.20    

ProteinModelPortal

Q1PCB0   H9JTS2   A0A2H1WU83   A0A2A4J026   A0A194RCQ5   I4DKY9   + More
A0A194PXE1   S4PS64   A0A437BGB8   A0A0L7LJZ2   A0A212EHZ8   A0A212EHZ5   A0A1B6BY41   A0A1Y1M739   A0A1B6J6U3   A0A1Y1M6Z0   A0A3R7PCX9   A0A151IZZ7   A0A2J7PGW7   A0A026W5Y4   A0A232FAI2   A0A195FNP1   E0VFZ8   A0A195B4Q7   A0A2G8JPJ8   A0A0P4VZY2   A0A1D2NK98   A0A2P2I342   A0A158NQ60   E2AIC3   T1J8D0   A0A0P4W5N0   H3AEB3   B0X0U6   J3JWS8   A0A0M8ZT79   C3YBZ9   F4WMQ6   A0A1D2M0K6   A0A0L0CE76   X1Z5D6   A0A1B6MF52   A0A226EEP0   A0A1Q3FH08   U4U7K8   A0A034WY02   A0A0C9PXI5   A0A034WWD2   A0A034WSX9   A0A154P5Q6   A0A2A3EK58   A0A182FSY6   A0A2M4CTN6   A0A336M7R7   T1E7V1   A0A2M4APJ2   A0A182VJ56   Q7QK95   A0A182HZI6   A0A182LQI5   A0A182NZE8   E9HCR8   A0A182X375   A0A2M4CU56   Q17HC0   A0A182HCG5   A0A0C9RCS1   A0A2M4BYL7   Q1HQV7   A0A2M4BYT9   A0A088A8V8   A0A084VX03   U5EHA4   A0A139WC72   E2C0I9   A0A0K8W6N7   A0A0K8UCQ1   A0A0P6IIY3   A0A0P5A7D0   A0A182JD03   A0A2P8XHQ6   A0A0P6DFV2   A0A182HCF9   A0A182NMR5   V9KUI5   A0A1L8EIF4   A0A2H8U0M8   A0A0A1WG02   A0A2C9KS20   A0A401PDD3   W4Y0A9   A0A182Q9T7   A0A1D1VFP1   A0A1I8PNM5   B4R0A1   S4RPV4   B4N8C2   A0A1S3KHA6   A0A0Q9WV97   A0A2C9KS55  

PDB

1NRG     E-value=4.47104e-54,     Score=532

KEGG

101747043    K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] | (RefSeq) pyridoxine-5'-phosphate oxidase-lik

PATHWAY

00750    Vitamin B6 metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0010181   GO:0004733   GO:0008615   GO:0005885   GO:0034314   GO:0030041   GO:0016021   GO:0042823   GO:0009744   GO:0016491   GO:0016638   GO:0005488   GO:0005515   GO:0009258   GO:0016155   GO:0003824   GO:0048037  

PANTHER

PTHR10851  

Length:

246

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01781

Exp number, first 60 AAs:

0.01685

Total prob of N-in:

0.03087

outside

1  -  246

 

 

Pi

223.723328

Theta

21.834741

Tajima's D

0.828504

CLR

0.519807

CSRT

0.615319234038298

Interpretation

Uncertain