Gene

KWMTBOMO09746  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012936

Annotation

PREDICTED:_zinc_finger_protein_593_homolog_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr16(-):8662279-8663640      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.583

CDS

ATGACATATAAGCGCAAGAAATATCATTGTGGCGACACACATTTAAAAAAGCGGTGGAGAGTGCGTAACAGAAAGAAAGATTTGGATGAAATAGACCAAGATTTAAAGGAAGAAAATGCTGAAAAATTACTGAACCAAAAAGTTGATTTAGATCTGCCAGGTGCAGCACAACATTACTGTCTACATTGTGCAAGGTATTTCATTGATGAACAAGCTTTGAATGATCATTTCAAGACAAAAGTCCATAAACGGAGATTAAAAGCACTCGAGCTTGAACCTTATACTATAGAAGAGTCAGAGAGAGCTGCTGGCCACGGGAGTTTCAAAACAGCAACAAAACGAAAAATTGTTTCACAAAATATTGAGAAATCTCAAACAGATGAAGATGGTGATGCTATTTTAGAGGAAAGTCCAAACAAAAAGAAGAAAATTGATGACAATGATATATAA

Protein

MTYKRKKYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFKTKVHKRRLKALELEPYTIEESERAAGHGSFKTATKRKIVSQNIEKSQTDEDGDAILEESPNKKKKIDDNDI

Uniprot

H9JTS4   A0A194PZR7   A0A194R1Q4   A0A0L7L3S4   A0A2H1VTP7   A0A3S2NLL5   + More
A0A212FMD7   A0A2Z5U7Q5   A0A1W4XC83   A0A026WXA2   D2A3H6   A0A087ZU54   A0A0N0BHK7   E2BF02   E2B068   A0A2A3EH23   A0A0L7R678   A0A310SIT5   A0A158NQE7   A0A0P4VV84   F4WHA3   T1HSH2   A0A151XDM4   A0A195EWE7   A0A0A9WPC8   A0A195DUT9   A0A1Y1NJW3   A0A195CRH7   K7ILY2   E9IDI0   E9HEE7   J3JWU7   A0A0P5Y8T0   A0A0P5FH53   A0A0P4XEK8   J9K5I9   D3PFQ3   D3PJT2   A0A1L8DG91   A0A1B0D6I5   A0A232F7J8   A0A1B0CTR6   A0A210QWK8   C1BQ26   A0A0P5Y991   W8C313   T1PFR5   A0A1I8NB63   A0A2M4AV84   T1JB80   E0VBG2   A0A1S3DJZ9   B4H335   D0QWF7   B4JMY5   Q29JJ2   A0A182IX72   A0A0K8TQY1   A0A3B0JZL5   W5JL38   A0A182F8E2   A0A182YEU8   A0A2M3ZBA5   B4M7G5   A0A182MVF0   A0A2M4C244   B4L5X2   A0A1I8PR39   A0A182R8D0   B3MZ59   A0A182W2Z2   A0A2P8YPC6   B3NXU0   A0A1B0BDK3   B4PYU0   A0A023EIM9   A0A1W4VE79   T1DK94   A0A1L8EE05   K1REP2   A0A182WVF7   A0A182VCL3   A0A182U443   A0A182KXY8   Q5TT40   A0A182I936   A0A1Z5L4X7   A0A1A9YMG9   B4NE69   A0A0L0CC84   A0A3R7SQ34   A0A182PTT2   U5EIH7   A0A1A9ZKU6   A0A1A9UW44   A0A0M4EVY2   A0A182T181   A0A1S3KHE7   A0A182JYB6   A0A2C9JLB2  

Pubmed

19121390    26354079    26227816    22118469    24508170    30249741    + More
18362917    19820115    20798317    21347285    21719571    25401762    26823975    28004739    20075255    21282665    21292972    22516182    28648823    28812685    24495485    25315136    20566863    17994087    19859648    15632085    26369729    20920257    23761445    25244985    18057021    29403074    17550304    24945155    22992520    20966253    12364791    14747013    17210077    28528879    26108605    15562597   

EMBL

BABH01003440    KQ459582    KPI98822.1    KQ460878    KPJ11622.1    JTDY01003207    + More
KOB69944.1    ODYU01004373    SOQ44187.1    RSAL01000008    RVE54022.1    AGBW02007651    OWR54912.1    AP017474    BBB06701.1    KK107078    QOIP01000011    EZA60376.1    RLU16735.1    KQ971338    EFA02318.1    KQ435750    KOX76368.1    GL447903    EFN85725.1    GL444408    EFN60925.1    KZ288260    PBC30456.1    KQ414648    KOC66281.1    KQ762237    OAD55990.1    ADTU01023180    GDRN01125025    JAI56692.1    GL888156    EGI66428.1    ACPB03008832    KQ982273    KYQ58449.1    KQ981948    KYN32558.1    GBHO01036914    GBRD01001154    GBRD01001152    GDHC01014145    JAG06690.1    JAG64667.1    JAQ04484.1    KQ980322    KYN16638.1    GEZM01001079    JAV98181.1    KQ977444    KYN02714.1    GL762454    EFZ21309.1    GL732629    EFX69887.1    BT127715    AEE62677.1    GDIP01061269    JAM42446.1    GDIQ01257434    JAJ94290.1    GDIP01243828    JAI79573.1    ABLF02034158    BT120459    ADD24099.1    BT121888    ADD38818.1    GFDF01008606    JAV05478.1    AJVK01003616    NNAY01000803    OXU26429.1    AJWK01027899    NEDP02001496    OWF53159.1    BT076705    ACO11129.1    GDIP01061270    JAM42445.1    GAMC01002932    JAC03624.1    KA647657    AFP62286.1    GGFK01011301    MBW44622.1    JH432010    DS235030    EEB10718.1    CH479205    EDW30728.1    FJ821027    ACN94661.1    CH916371    EDV92078.1    CH379063    EAL32309.1    GDAI01000834    JAI16769.1    OUUW01000003    SPP78806.1    ADMH02001252    ETN63474.1    GGFM01004977    MBW25728.1    CH940653    EDW62732.1    AXCM01000016    GGFJ01010080    MBW59221.1    CH933811    EDW06581.1    KRG07027.1    CH902632    EDV32903.1    PYGN01000453    PSN46092.1    CH954180    EDV47391.1    JXJN01012507    CM000162    EDX01026.1    GAPW01005134    JAC08464.1    GAMD01001061    JAB00530.1    GFDG01001925    JAV16874.1    JH817914    EKC39850.1    AAAB01008888    EAA08789.5    EAU76933.2    APCN01003167    GFJQ02004650    JAW02320.1    CH964239    EDW82038.1    JRES01000586    KNC30033.1    QCYY01002431    ROT70409.1    GANO01002635    JAB57236.1    CP012528    ALC49510.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000037510    UP000283053    UP000007151    + More
UP000192223    UP000053097    UP000279307    UP000007266    UP000005203    UP000053105    UP000008237    UP000000311    UP000242457    UP000053825    UP000005205    UP000007755    UP000015103    UP000075809    UP000078541    UP000078492    UP000078542    UP000002358    UP000000305    UP000007819    UP000092462    UP000215335    UP000092461    UP000242188    UP000095301    UP000009046    UP000079169    UP000008744    UP000001070    UP000001819    UP000075880    UP000268350    UP000000673    UP000069272    UP000076408    UP000008792    UP000075883    UP000009192    UP000095300    UP000075900    UP000007801    UP000075920    UP000245037    UP000008711    UP000092460    UP000002282    UP000192221    UP000005408    UP000076407    UP000075903    UP000075902    UP000075882    UP000007062    UP000075840    UP000092443    UP000007798    UP000037069    UP000283509    UP000075885    UP000092445    UP000078200    UP000092553    UP000075901    UP000085678    UP000075881    UP000076420   

PRIDE

H9JTS4   

Pfam

PF12171   zf-C2H2_jaz        + More
PF00587   tRNA-synt_2b

Interpro

IPR003604   Matrin/U1-like-C_Znf_C2H2        + More
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR022755   Znf_C2H2_jaz       
IPR002314   aa-tRNA-synt_IIb       
IPR006195   aa-tRNA-synth_II       
IPR002317   Ser-tRNA-ligase_type_1       
IPR010978   tRNA-bd_arm       

SUPFAM

SSF57667   SSF57667        + More
SSF46589   SSF46589       

ProteinModelPortal

H9JTS4   A0A194PZR7   A0A194R1Q4   A0A0L7L3S4   A0A2H1VTP7   A0A3S2NLL5   + More
A0A212FMD7   A0A2Z5U7Q5   A0A1W4XC83   A0A026WXA2   D2A3H6   A0A087ZU54   A0A0N0BHK7   E2BF02   E2B068   A0A2A3EH23   A0A0L7R678   A0A310SIT5   A0A158NQE7   A0A0P4VV84   F4WHA3   T1HSH2   A0A151XDM4   A0A195EWE7   A0A0A9WPC8   A0A195DUT9   A0A1Y1NJW3   A0A195CRH7   K7ILY2   E9IDI0   E9HEE7   J3JWU7   A0A0P5Y8T0   A0A0P5FH53   A0A0P4XEK8   J9K5I9   D3PFQ3   D3PJT2   A0A1L8DG91   A0A1B0D6I5   A0A232F7J8   A0A1B0CTR6   A0A210QWK8   C1BQ26   A0A0P5Y991   W8C313   T1PFR5   A0A1I8NB63   A0A2M4AV84   T1JB80   E0VBG2   A0A1S3DJZ9   B4H335   D0QWF7   B4JMY5   Q29JJ2   A0A182IX72   A0A0K8TQY1   A0A3B0JZL5   W5JL38   A0A182F8E2   A0A182YEU8   A0A2M3ZBA5   B4M7G5   A0A182MVF0   A0A2M4C244   B4L5X2   A0A1I8PR39   A0A182R8D0   B3MZ59   A0A182W2Z2   A0A2P8YPC6   B3NXU0   A0A1B0BDK3   B4PYU0   A0A023EIM9   A0A1W4VE79   T1DK94   A0A1L8EE05   K1REP2   A0A182WVF7   A0A182VCL3   A0A182U443   A0A182KXY8   Q5TT40   A0A182I936   A0A1Z5L4X7   A0A1A9YMG9   B4NE69   A0A0L0CC84   A0A3R7SQ34   A0A182PTT2   U5EIH7   A0A1A9ZKU6   A0A1A9UW44   A0A0M4EVY2   A0A182T181   A0A1S3KHE7   A0A182JYB6   A0A2C9JLB2  

PDB

1ZR9     E-value=1.4928e-17,     Score=213

KEGG

101742402    K14821 bud site selection protein 20 | (RefSeq) zinc finger protein 593 homolog

GO

GO:0008270   GO:0003676   GO:0006434   GO:0004828   GO:0005524   GO:0046872   GO:0000055   GO:0043023   GO:0005623   GO:0030687   GO:0005840   GO:0016818   GO:0006139   GO:0008026   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR11778  

Length:

149

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.81752

inside

1  -  149

 

 

Pi

345.011081

Theta

217.174419

Tajima's D

1.761558

CLR

0.132963

CSRT

0.846307684615769

Interpretation

Uncertain