Silkworm Genome Informatics Database

Gene

KWMTBOMO09744

Pre Gene Modal

BGIBMGA012937

Annotation

PREDICTED:_zinc_finger_protein_677-like_[Bombyx_mori]

Location

Bomo_Chr16(-):8644982-8650300 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 3.802

CDS

ATGGAAAACAATTTACCATTTTTCAGTTTACCATTTGTAGATTCGCAGCCTTCGGAGTTAGATTATGGTAAATCAAAAGAAGAAGGCCTACTGGCTAATTTACACACGACTCTAGTATCTCAAGGTTCGTTGCTAAGCGAAGAAGATGTTTTGGCCCAGTTCCTATCTTTGGATGAACCATTGGAAGAGCCAGATCTGAATGGTCCTGCAACGTTATGCTGTGAAATATGTAAACGAAAATTCGACAATGCCAAAAAGTATTATGGACATTTGCGAGTACATTCCAAAAGCAATACTTGGTTGTGTGAGCAATGTCCTAATGCGAAATTTACGACAAAGCAACAGTTGATGAGACACAGTCTCATTCATAAGCCACTGGAGAGGGTATGGAGATGTCCTCAATGTCCACTGGCATTCGAAGCACTGTGGAGACTACAACAACATCTTTTTGCAAAGCATCTGGATTATAAACCGCACAAGTGTGATCAATGTACAAAGACATTTGACAAAAAATCAGATCTTAAGAAGCATATTAGTGTGCATACAGGGGAAAAGAAACATGAGTGTCCCGTTTGCAAGGCCAAGTTTAATGATAAGTCCAATTTCAACAGACATACTCTTCTGCACACAAATACACAACCATTTTGCTGCCCTGGCTGCGGTAGTAGGTTCAGACAGTTGGCATCAATGAAACGTCATTATCAAAATTGTAAAAAATGCAAGGGGTTGAATGAACTCGGTGATAAAACTGTCAGAAAGAACTACTGCAGGATCTGTGGAATGTCATTCCAATACAGAAGTGCTTTGTTAGAGCATTGTGTTCGCGAACACCCAGATGGAAAGAAGTCAAAAAAGAACATAGATGGCTTAAAGTTAAAAAAAGAGCCCGGGAAATTTAATAAAGAAAACGAGAAAGACGTTTCCAATATGGTACACCCGAAGCCGGCCAGTAGACCAGAGGATAATATCATGGACGATATACTCTCAGCAGAAGATGACTACGTCACACTCACAACGCCCGATGAAATCATCAATATCTTCAATCCGCCGACGGACGTGAACAATACAGACGACATGACCCAACTAGAAGAAATAGACGACGAACTGCTGTACAATAACATCGACTTTGATAATTTTAAAGCCGGCCACATGTTTAATTTGAACACGAACGACATGGACTACAATGTCGACACTATGCCTAATGGCGAGATATTATTCGATTTCGTCGACGGTAAAAGTATCGATAATTTGCCTGAAGAGTTATTAAAAGCTGCCGAAGAGTTACCGGATAAACCTGAAGAAATGTTCGGGGCCAATGAGAACGAATGTTCGATTATATTCGAGAGTGATGTAGATCTCGAAGCCAGTAAGACTCTAGCGGCCAATCTAAATCAACTCATAGGAGAGAACAACGTTCAGTACATATCCACTGAAGACGACGACACCTTCGTCATAAGCTTGAGCAGCGAAATCAACGCCGAATTGACTGAAATGCTGAACAACATTGGTGTGGGAATGAACAGCGAAACTGTTAACTCGAAAGCTGACGAAACTGCGGAAGCGGTCAGCAACATACCCGCTATGGAGTCCATGGTCAGCGAACCGATAGTGGTGGAAATCAAACAGAAGCCGACGACCGTCACCGGTCAGTCGCTCTCATTGACACAGAATAAAATGCCCAATTCAGAAACGAAACACGGTGAATTGAAAATAAAAGGTATTAAAGGGAGGAAACTGTTTATATTCGCCTGCAGAATTTGTAATAAAGTGTTTAACAAAAAGGACAATTATACATCGCACATGGCCATCCACGAGCCGGAGCTGTGTCGGCACGTGTGCGCGGTGTGTGGCCAAAGGTTCGGGTACCGCTCCACGCTAAACAAGCACATGCGCGCCGCACACGAGCCGCGCACGCACACCGCGCACCGCTGCCACTACTGCGACCGGACCTACACCGCCGCCTGGATGGTTAGCTTCCAACTGTTCTAA

Protein

MENNLPFFSLPFVDSQPSELDYGKSKEEGLLANLHTTLVSQGSLLSEEDVLAQFLSLDEPLEEPDLNGPATLCCEICKRKFDNAKKYYGHLRVHSKSNTWLCEQCPNAKFTTKQQLMRHSLIHKPLERVWRCPQCPLAFEALWRLQQHLFAKHLDYKPHKCDQCTKTFDKKSDLKKHISVHTGEKKHECPVCKAKFNDKSNFNRHTLLHTNTQPFCCPGCGSRFRQLASMKRHYQNCKKCKGLNELGDKTVRKNYCRICGMSFQYRSALLEHCVREHPDGKKSKKNIDGLKLKKEPGKFNKENEKDVSNMVHPKPASRPEDNIMDDILSAEDDYVTLTTPDEIINIFNPPTDVNNTDDMTQLEEIDDELLYNNIDFDNFKAGHMFNLNTNDMDYNVDTMPNGEILFDFVDGKSIDNLPEELLKAAEELPDKPEEMFGANENECSIIFESDVDLEASKTLAANLNQLIGENNVQYISTEDDDTFVISLSSEINAELTEMLNNIGVGMNSETVNSKADETAEAVSNIPAMESMVSEPIVVEIKQKPTTVTGQSLSLTQNKMPNSETKHGELKIKGIKGRKLFIFACRICNKVFNKKDNYTSHMAIHEPELCRHVCAVCGQRFGYRSTLNKHMRAAHEPRTHTAHRCHYCDRTYTAAWMVSFQLF

Uniprot

A0A1E1W6U7 A0A2A4K3Y6 A0A437BU90 A0A194R1D7 A0A2H1VTN2 A0A2H1VTN7 + More
A0A212FMC5 A0A194Q602 A0A2W1BYB3 A0A2Z5U706

Pubmed

26354079 22118469 28756777

EMBL

GDQN01008346 JAT82708.1 NWSH01000188 PCG78614.1 RSAL01000008 RVE54024.1 + More
KQ460878 KPJ11608.1 ODYU01004374 SOQ44189.1 ODYU01004372 SOQ44183.1 AGBW02007651 OWR54914.1 KQ459582 KPI98835.1 KZ149898 PZC78645.1 AP017474 BBB06703.1

Proteomes

UP000218220 UP000283053 UP000053240 UP000007151 UP000053268

Pfam

PF00096   zf-C2H2        + More
PF07653   SH3_2
PF14604   SH3_9

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type
IPR001370   BIR_rpt
IPR001452   SH3_domain
IPR035755   RIM-BP_SH3_3
IPR013783   Ig-like_fold
IPR003961   FN3_dom
IPR040325   RIMBP1/2/3
IPR036116   FN3_sf
IPR035753   RIM-BP_SH3_2
IPR036028   SH3-like_dom_sf

SUPFAM

SSF57667   SSF57667        + More
SSF49265   SSF49265
SSF50044   SSF50044

Gene 3D

2.60.40.10

CDD

cd12012  SH3_RIM-BP_2
cd00063  FN3
cd12013  SH3_RIM-BP_3

ProteinModelPortal

A0A1E1W6U7 A0A2A4K3Y6 A0A437BU90 A0A194R1D7 A0A2H1VTN2 A0A2H1VTN7 + More
A0A212FMC5 A0A194Q602 A0A2W1BYB3 A0A2Z5U706

PDB

5WJQ E-value=4.31995e-19, Score=235

KEGG

101747182 no KO assigned | (RefSeq) zinc finger protein 677-like

GO

GO:0003676 GO:0046872 GO:0005524 GO:0016818 GO:0006139 GO:0008026 GO:0009258 GO:0016155 GO:0003824

PANTHER

PTHR14234

Length:

662

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00003

outside

1 - 662

Pi

318.545566

Theta

203.509841

Tajima's D

1.502909

CLR

0.410138

CSRT

0.788360581970901

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics