SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09742
Annotation
PREDICTED:_fatty_acid-binding_protein?_muscle-like_[Papilio_xuthus]
Full name
Fatty acid-binding protein, heart      
Alternative Name
Fatty acid-binding protein 3
Heart-type fatty acid-binding protein
Mammary-derived growth inhibitor
Location in the cell
Cytoplasmic   Reliability : 2.855
 

Sequence

CDS
ATGGACGAATTTCTTGAATTAAAATACGTTTTGGTCGAATCGGAGAATTTTGACGACTATTTAACGTTTATCGGTATCGGATACTTCGCAAGGAAAGTGGCTATCAACTTGAAACCCGTTCAATCTCTGAGGAAGAACCATGACGGAACTTACAGTTTCGATTTCACATCATCAGTCACCAGCTATACGATAACGTTCACACCCGGCGTGGAGTTTGAGGAGGTCAAACCGGACGGGGTTAAGGCGAAATCCATAATCACCTTTGAAGGCAACAAAATGATCCACATACAGGGCGAACAGAATGGAACCACGTCGGAGCACGTCCGTGAATTTTACGAAGATCAATTAATAGTGACAACAACTGCTAACGGCTTCGACAAGACTGCCATTAGGAAGTACCAAAGAATTTATTAA
Protein
MDEFLELKYVLVESENFDDYLTFIGIGYFARKVAINLKPVQSLRKNHDGTYSFDFTSSVTSYTITFTPGVEFEEVKPDGVKAKSIITFEGNKMIHIQGEQNGTTSEHVREFYEDQLIVTTTANGFDKTAIRKYQRIY

Summary

Similarity
Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
Keywords
Acetylation   Complete proteome   Cytoplasm   Direct protein sequencing   Lipid-binding   Phosphoprotein   Reference proteome   Transport   Polymorphism  
Feature
chain  Fatty acid-binding protein, heart
EMBL
KQ459582    KPI98838.1    KQ460878    KPJ11606.1    AP017474    BBB06705.1    + More
ODYU01004372    SOQ44185.1    ODYU01004915    SOQ45280.1    AGBW02007651    OWR54916.1    NWSH01001701    PCG70395.1    AGBW02007648    OWR55129.1    BABH01003492    BABH01003493    KPJ11575.1    AK402833    BAM19412.1    GDQN01002874    JAT88180.1    KPI98871.1    KZ150128    PZC73095.1    JTDY01006797    KOB65681.1    UFQS01002182    UFQT01000523    UFQT01002182    SSX13447.1    SSX24926.1    SSX32878.1    GBRD01014100    JAG51726.1    UFQT01000450    UFQT01001006    SSX24485.1    SSX28424.1    GBRD01007489    JAG58332.1    EU325560    KZ149898    ACB54950.1    PZC78673.1    NWSH01003893    PCG65719.1    U75307    AAC24317.1    MG992392    AXY94830.1    DQ673412    ABG81985.1    GGMS01000088    MBY69291.1    GDQN01006476    JAT84578.1    AB180450    BAD26694.1    DQ109670    DQ311348    DQ539018    EF112401    AB262579    AAZ82096.1    ABD36292.1    ABG20590.1    ABK97427.1    BAE96009.1    GFXV01001136    MBW12941.1    LJIJ01001282    ODM92265.1    AB267808    BAF02663.1    NWSH01001632    PCG70637.1    ABJB010329078    ABJB010429483    DS973253    EEC20182.1    GADI01001881    GEFM01001822    JAA71927.1    JAP73974.1    GAIX01006016    JAA86544.1    GEDC01010368    JAS26930.1    AGBW02007650    OWR55117.1    UFQT01006868    SSX36141.1    GGMR01004411    MBY17030.1    ABLF02030056    AK342527    BAH72520.1    KC127672    AGG56524.1    UFQS01003764    UFQT01003764    SSX15925.1    SSX35267.1    GBYB01011169    JAG80936.1    AK416948    BAN20163.1    GFXV01004975    MBW16780.1    KQ761662    OAD57182.1    SAUD01001436    RXG71571.1    KC632308    AGM32122.1    GGMR01019088    MBY31707.1    GALA01000600    JAA94252.1    GBYB01011170    JAG80937.1    AK402706    BAM19328.1    AANG04003369    KJ804230    KX681675    AJO53281.1    AQM55954.1    AAZX01000617    AAZX01000618    CH477369    EAT42473.1    MF947511    AYK27085.1    BC089542    AK142156    CH466552    AAH89542.1    BAE24952.1    EDL30140.1    X14961    U02884    U02883    BC002082    KC966936    AHV85210.1    DS235875    EEB19749.1    NCKV01005621    RWS23948.1    AAQR03165771    AAQR03165772    AAQR03165773    JR049662    AEY61033.1    GEBQ01023515    JAT16462.1    EF541361    ABQ18251.1    GBRD01001866    GDHC01009082    JAG63955.1    JAQ09547.1    JH169913    GEBF01001890    EHB07920.1    JAO01743.1    GECZ01014401    GECZ01007162    JAS55368.1    JAS62607.1    AF143950    AAD32219.1    GFTR01002259    JAW14167.1    AK401407    BAM18029.1    KPI98807.1    AB083010    BAC54131.1    ODYU01000601    SOQ35676.1    HM591296    DQIR01153351    ADL28430.1    HDB08828.1    X98558    AJ416019    EF619344    EF622095    NWMT01000107    PCC99322.1    MH366001    QBB01810.1    GECL01003738    JAP02386.1    KQ461183    KPJ07543.1    GAMD01001196    JAB00395.1    GGFL01004726    MBW68904.1    AQIB01142525    AHZZ02015668    AQIA01004947    CM001276    EHH49709.1    JSUE03000948    JU333373    CM001253    AFE77128.1    EHH14541.1   
Pfam
PF00061   Lipocalin
Interpro
IPR000566   Lipocln_cytosolic_FA-bd_dom        + More
IPR000463   Fatty_acid-bd       
IPR012674   Calycin       
IPR031259   ILBP       
SUPFAM
SSF50814   SSF50814       
Gene 3D
PDB
3RSW     E-value=1.98065e-15,     Score=194

Ontologies

Topology

Subcellular location
Cytoplasm  
Length:
137
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.06117
Exp number, first 60 AAs:
1.05606
Total prob of N-in:
0.12495
outside
1  -  137
 
 

Population Genetic Test Statistics

Pi
238.464922
Theta
149.230792
Tajima's D
1.713082
CLR
0.49846
CSRT
0.832058397080146
Interpretation
Uncertain
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