Gene

KWMTBOMO09741

Pre Gene Modal

BGIBMGA012899

Annotation

FancJ-like_protein_[Bombyx_mori]

Location

Bomo_Chr16(+):8565641-8566629      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.066 Extracellular   Reliability : 1.673

CDS

ATGATAGCAGGAGTGAAAGTTAATCTACCAGTAAACCCTTATGGGACTCAGAAGGCGTTGATACATCAGGTAATAAAGACCATAAAAGCTGGTCAGAATTGTCTGCTGGAAAGTCCAACTGGATCGGGTAAAACATTAGCACTGCTATGTGGAACACTGGCTTGGCTACAGGCGGAAAAAGAAGTAGAATACTTCAACAGCCAGATTGATCTGAGACTGTTGTGA

Protein

MIAGVKVNLPVNPYGTQKALIHQVIKTIKAGQNCLLESPTGSGKTLALLCGTLAWLQAEKEVEYFNSQIDLRLL

Uniprot

H9JTN7   A9EEZ8   A0A2A4JF43   A0A2W1BYG9   A0A437BUI9   A0A1B6D3M4   + More
A0A2H1VEX7   A0A194R2Y6   A0A194Q1H1   A0A2S2N9V6   A0A2S2PWP1   A0A0J7KWK3   A0A0M8ZU50   A0A0P5U0F6   A0A0P5L482   A0A0P6EJL2   A0A0P5YDA2   A0A0P5X042   A0A0P5SNU6   A0A0P5RJM9   A0A0P5H103   A0A0P5RIS4   A0A0P5I703   A0A0P5H677   A0A0P5QWR9   A0A0P5R7Z6   A0A0N8BGU5   A0A0P5GI45   A0A0P5QWX4   A0A0N8BNM0   A0A0P6EHQ6   A0A0P6F4M7   A0A0P5LHM1   A0A0P5Q5W0   A0A0P6F925   A0A0P5NVG4   A0A0P6G575   A0A0P6EPX3   A0A0N8BIT9   A0A0P5PAV7   A0A0P6DQW9   A0A0P5PE41   A0A0P5PAV0   A0A0P6ECY0   A0A0P5KQP3   A0A0P6H711   A0A0P5PSU9   A0A0P6D389   A0A0N8E2Q4   A0A0P5NNN9   A0A0N8AV91   A0A0N8CB41   A0A0P5ICG7   A0A0P6ECW0   A0A0P5WMG5   A0A0P5MJ85   A0A0P5JQL0   A0A0P5L257   A0A0P5KV22   A0A0P6H9I8   A0A0P5N6I0   A0A0P5E3P7   A0A0P4WUG9   A0A0P5YD46   A0A0N7ZPE7   A0A0P5QCY4   A0A0P5QCE0   A0A0P5YYR6   A0A0P5B3Z3   A0A0P5RQS6   A0A0P5U0K8   A0A0P5N0P9   J9JTM9   A0A0P5A570   A0A0P5WSH1   A0A0P6BSY6   A0A0P6D226   A0A0P5LKE4   A0A0P5B8M6   A0A164YAR6   A0A0P6A3B0   A0A0P5TUU8   A0A0P4W0A7   A0A2H8TS50   A0A026WJ22   A0A3L8DW40   A0A088AE06   E2AJQ9   A0A0N8CZF2   A0A1Y2GM85   A0A212FME2   A0A1E1WBB2   A0A1S3H1V2   A0A210Q6J2   A0A443SAS1   A0A3M7SVV0   A0A1A8R445   A0A310SCR0   A0A2T7PI48   A0A443RMG4  

Pubmed

19121390    28756777    26354079    24508170    30249741    20798317    + More
22118469    28812685    30375419   

EMBL

BABH01003449    AB369600    BAF94023.1    NWSH01001701    PCG70396.1    KZ149898    + More
PZC78644.1    RSAL01000008    RVE54025.1    GEDC01025983    GEDC01017007    GEDC01012452    GEDC01005159    JAS11315.1    JAS20291.1    JAS24846.1    JAS32139.1    ODYU01002198    SOQ39377.1    KQ460878    KPJ11605.1    KQ459582    KPI98839.1    GGMR01001382    MBY14001.1    GGMS01000745    MBY69948.1    LBMM01002555    KMQ94668.1    KQ435885    KOX69559.1    GDIP01121470    JAL82244.1    GDIQ01180641    JAK71084.1    GDIQ01061586    JAN33151.1    GDIP01059386    JAM44329.1    GDIP01079682    JAM24033.1    GDIQ01101575    JAL50151.1    GDIQ01101574    JAL50152.1    GDIQ01236878    JAK14847.1    GDIQ01106373    JAL45353.1    GDIQ01216988    GDIQ01121215    JAK34737.1    GDIQ01236879    GDIQ01234674    JAK17051.1    GDIQ01214091    GDIQ01108672    JAL43054.1    GDIQ01235786    GDIQ01197037    GDIQ01127320    GDIQ01106374    GDIQ01093368    GDIQ01090971    JAL45352.1    GDIQ01179099    JAK72626.1    GDIQ01241135    JAK10590.1    GDIQ01214090    GDIQ01108673    JAL43053.1    GDIQ01160099    JAK91626.1    GDIQ01076529    JAN18208.1    GDIQ01061585    JAN33152.1    GDIQ01173546    JAK78179.1    GDIQ01125618    JAL26108.1    GDIQ01059537    JAN35200.1    GDIQ01137156    JAL14570.1    GDIQ01056935    JAN37802.1    GDIQ01059538    JAN35199.1    GDIQ01173547    GDIQ01056936    JAK78178.1    GDIQ01241175    GDIQ01131173    GDIQ01063684    JAL20553.1    GDIQ01082180    GDIQ01073735    JAN21002.1    GDIQ01154408    GDIQ01151513    JAL00213.1    GDIQ01241176    GDIQ01131174    JAL20552.1    GDIQ01110624    GDIQ01078723    JAN16014.1    GDIQ01180640    JAK71085.1    GDIQ01033512    JAN61225.1    GDIQ01123767    JAL27959.1    GDIQ01083640    JAN11097.1    GDIQ01067636    JAN27101.1    GDIQ01161598    GDIQ01158247    JAK90127.1    GDIQ01239531    GDIQ01183195    GDIQ01162955    JAK12194.1    GDIQ01195386    GDIQ01112372    GDIQ01110623    GDIQ01097131    GDIQ01095471    GDIQ01080623    JAL54595.1    GDIQ01239532    GDIQ01183196    JAK12193.1    GDIQ01139605    GDIQ01067637    GDIQ01066484    GDIQ01065181    JAN29556.1    GDIP01096932    JAM06783.1    GDIQ01162956    JAK88769.1    GDIQ01201185    JAK50540.1    GDIQ01201186    JAK50539.1    GDIQ01179100    JAK72625.1    GDIQ01022762    JAN71975.1    GDIQ01148906    JAL02820.1    GDIP01147275    JAJ76127.1    GDIP01255062    JAI68339.1    GDIP01059387    JAM44328.1    GDIP01225561    JAI97840.1    GDIQ01116079    JAL35647.1    GDIQ01116078    JAL35648.1    GDIP01051394    JAM52321.1    GDIP01190010    JAJ33392.1    GDIQ01106376    GDIQ01106375    JAL45350.1    GDIP01119472    JAL84242.1    GDIQ01160100    JAK91625.1    ABLF02037483    ABLF02037488    ABLF02057061    GDIP01204070    JAJ19332.1    GDIP01082035    JAM21680.1    GDIP01010419    JAM93296.1    GDIP01007076    JAM96639.1    GDIQ01179098    JAK72627.1    GDIP01192311    JAJ31091.1    LRGB01000930    KZS15060.1    GDIP01034892    JAM68823.1    GDIP01126474    JAL77240.1    GDRN01094326    JAI59731.1    GFXV01005218    MBW17023.1    KK107182    EZA56025.1    QOIP01000003    RLU24710.1    GL440062    EFN66343.1    GDIP01083831    JAM19884.1    MCFF01000019    ORZ15459.1    AGBW02007651    OWR54915.1    GDQN01006825    JAT84229.1    NEDP02004827    OWF44325.1    NCKV01004593    RWS24656.1    REGN01000696    RNA39903.1    HAEH01014416    SBS00014.1    KQ761246    OAD57953.1    PZQS01000004    PVD33101.1    NCKU01000228    RWS16463.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000036403    + More
UP000053105    UP000007819    UP000076858    UP000053097    UP000279307    UP000005203    UP000000311    UP000193648    UP000007151    UP000085678    UP000242188    UP000288716    UP000276133    UP000245119    UP000285301   

PRIDE

H9JTN7    A9EEZ8   

Pfam

PF06733   DEAD_2        + More
PF13307   Helicase_C_2
PF00270   DEAD
PF00646   F-box

Interpro

IPR014013   Helic_SF1/SF2_ATP-bd_DinG/Rad3        + More
IPR027417   P-loop_NTPase       
IPR006554   Helicase-like_DEXD_c2       
IPR010614   DEAD_2       
IPR013020   Rad3/Chl1-like       
IPR006555   ATP-dep_Helicase_C       
IPR002464   DNA/RNA_helicase_DEAH_CS       
IPR014001   Helicase_ATP-bd       
IPR011545   DEAD/DEAH_box_helicase_dom       
IPR018247   EF_Hand_1_Ca_BS       
IPR001810   F-box_dom       
IPR032675   LRR_dom_sf       
IPR006553   Leu-rich_rpt_Cys-con_subtyp       
IPR036047   F-box-like_dom_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF81383   SSF81383       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9JTN7   A9EEZ8   A0A2A4JF43   A0A2W1BYG9   A0A437BUI9   A0A1B6D3M4   + More
A0A2H1VEX7   A0A194R2Y6   A0A194Q1H1   A0A2S2N9V6   A0A2S2PWP1   A0A0J7KWK3   A0A0M8ZU50   A0A0P5U0F6   A0A0P5L482   A0A0P6EJL2   A0A0P5YDA2   A0A0P5X042   A0A0P5SNU6   A0A0P5RJM9   A0A0P5H103   A0A0P5RIS4   A0A0P5I703   A0A0P5H677   A0A0P5QWR9   A0A0P5R7Z6   A0A0N8BGU5   A0A0P5GI45   A0A0P5QWX4   A0A0N8BNM0   A0A0P6EHQ6   A0A0P6F4M7   A0A0P5LHM1   A0A0P5Q5W0   A0A0P6F925   A0A0P5NVG4   A0A0P6G575   A0A0P6EPX3   A0A0N8BIT9   A0A0P5PAV7   A0A0P6DQW9   A0A0P5PE41   A0A0P5PAV0   A0A0P6ECY0   A0A0P5KQP3   A0A0P6H711   A0A0P5PSU9   A0A0P6D389   A0A0N8E2Q4   A0A0P5NNN9   A0A0N8AV91   A0A0N8CB41   A0A0P5ICG7   A0A0P6ECW0   A0A0P5WMG5   A0A0P5MJ85   A0A0P5JQL0   A0A0P5L257   A0A0P5KV22   A0A0P6H9I8   A0A0P5N6I0   A0A0P5E3P7   A0A0P4WUG9   A0A0P5YD46   A0A0N7ZPE7   A0A0P5QCY4   A0A0P5QCE0   A0A0P5YYR6   A0A0P5B3Z3   A0A0P5RQS6   A0A0P5U0K8   A0A0P5N0P9   J9JTM9   A0A0P5A570   A0A0P5WSH1   A0A0P6BSY6   A0A0P6D226   A0A0P5LKE4   A0A0P5B8M6   A0A164YAR6   A0A0P6A3B0   A0A0P5TUU8   A0A0P4W0A7   A0A2H8TS50   A0A026WJ22   A0A3L8DW40   A0A088AE06   E2AJQ9   A0A0N8CZF2   A0A1Y2GM85   A0A212FME2   A0A1E1WBB2   A0A1S3H1V2   A0A210Q6J2   A0A443SAS1   A0A3M7SVV0   A0A1A8R445   A0A310SCR0   A0A2T7PI48   A0A443RMG4  

PDB

6GYM     E-value=0.0124526,     Score=84

KEGG

100126867    K15362 fanconi anemia group J protein [EC:3.6.4.12] | (RefSeq) FancJ-like protein

GO

GO:0005524   GO:0005634   GO:0006139   GO:0003677   GO:0004003   GO:0016021   GO:0004386   GO:0016887   GO:0006355   GO:0016788   GO:0046872   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

Subcellular location

Nucleus  

Length:

74

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04773

Exp number, first 60 AAs:

0.04771

Total prob of N-in:

0.18024

outside

1  -  74

 

 

Pi

296.500109

Theta

180.556026

Tajima's D

1.953133

CLR

0

CSRT

0.873706314684266

Interpretation

Uncertain