Gene

KWMTBOMO09739

Pre Gene Modal

BGIBMGA012897

Annotation

Optomotor-blind_protein_[Habropoda_laboriosa]

Location

Bomo_Chr16(+):8425802-8430445      View in EpiBrowser

Transcription factor

T-box

Location in the cell

Extracellular   Reliability : 1.692 Mitochondrial   Reliability : 1.589

CDS

ATGTTCCCACAAATGAAGTTCCGCGTCTCCGGATTGGACGCGAAAGCCAAATACATCCTCCTGTTGGACATCGTCGCCGCTGATGACTACAGATATAAGTTCCACAACAGTCGGTGGATGGTCGCCGGCAAAGCGGATCCGGAGATGCCGAAAAGAATGTACATACATCCCGACTCGCCGTCCACTGGAGAGCAGTGGATGCAGAAGGTCGTCTCCTTCCACAAGCTCAAGCTGACGAACAACATAAGCGACAAGCACGGTTTCACGTGGGACTACAACAAATATGCTTAA

Protein

MFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSPSTGEQWMQKVVSFHKLKLTNNISDKHGFTWDYNKYA

Uniprot

A0A182UTL1   A0A0L7R337   A0A182YJF8   A0A182WEF4   A0A182TUL4   A0A194Q1H6   + More
A0A1A9XBY6   A0A1B0B8B6   A0A336LQP0   A0A182FPM9   Q7PZ39   A0A182MXV3   A0A182PC57   A0A182HH16   B4R4H9   A0A182GG40   A0A182Q4P7   A0A182MDI3   A0A2A4K4B4   B0W0Q1   A0A1D2NGF9   A0A1I8NK26   A0A1A9VRH4   A0A1A9W8V0   A0A182XKQ9   A0A182IN80   A0A1A9ZGP3   A0A2A3EAU5   A0A0P6ITF1   Q17PY6   A0A084W8I1   A0A411DB37   E9FYB6   A0A226ELJ8   A0A1B0CJV0   A0A2W1C3A6   A0A2A4K5G9   A0A2A4K3S4   B4I0Z1   B3NU30   A0A1S4G7T0   A0A088AE04   A0A3Q0IM06   W8ATA1   A0A336M1P3   A0A195F3M1   A0A151IXY8   A0A139WFZ8   A0A143WE49   A0A1W4WCI0   A0A0J7L0X6   W5JKC9   A0A1B0DRD3   A0A437B1H7   A0A1W4WMJ5   A0A3L8DX99   A0A0P5YAM1   A0A139WG93   A0A0P5B8S3   A0A0P4YFP3   A0A158NZS4   A0A0P5P0K3   A0A0P4YIG0   A0A195CM35   A0A0P5Z9Y0   A0A0P5C6D1   Q5K2Q2   A0A0K2UTQ6   A0A1B0FJD9   A0A3R7MJH1   A0A0P5FWZ9   B1V8P7   A0A0P5H572   A0A154P856   A0A1W4UP69   A0A0P5FHZ1   Q6J4Z5   A0A0P6EDF6   A0A1J1IZB3   X2JI97   A0A1W4V1M3   A0A0P4ZPQ3   A0A0P5VPC9   A0A0N8EJD1   M9NEV8   A0A0K8UMK6   A0A0P4YQW9   A0A0N7ZR77   A0A0Q9WJN3   A0A0P5ZCM2   A0A0P8XS48   A0A0L0CRN5   B4L5S0   A0A0P6AYA2   B4Q057   A0A1I8NP30   M9PH16   A0A162CNP9   A0A077MJM1   A0A212FME5  

Pubmed

25244985    26354079    12364791    14747013    17210077    17994087    + More
26483478    27289101    25315136    26999592    17510324    24438588    21292972    28756777    24495485    18362917    19820115    26706852    20920257    23761445    30249741    21347285    15642089    18315808    15703749    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26108605    17550304    22118469   

EMBL

KQ414663    KOC65248.1    KQ459582    KPI98844.1    JXJN01009887    UFQS01003757    + More
UFQT01003757    SSX15912.1    SSX35254.1    AAAB01008986    EAA00486.3    APCN01002374    CM000366    EDX17069.1    JXUM01011235    KQ560326    KXJ83023.1    AXCN02002115    AXCM01011186    NWSH01000164    PCG78909.1    DS231818    EDS41353.1    LJIJ01000046    ODN04344.1    KZ288315    PBC28329.1    GDUN01000924    JAN94995.1    CH477188    EAT48808.1    ATLV01021436    KE525318    KFB46525.1    MG867658    QAY82423.1    GL732527    EFX87798.1    LNIX01000003    OXA58512.1    AJWK01015421    AJWK01015422    AJWK01015423    AJWK01015424    AJWK01015425    KZ149898    PZC78643.1    PCG78910.1    PCG78911.1    CH480819    EDW53172.1    CH954180    EDV45806.2    GAMC01018658    GAMC01018657    JAB87898.1    UFQT01000430    SSX24236.1    KQ981856    KYN34679.1    KQ980791    KYN13109.1    KQ971348    KYB26910.1    LN901333    CUT08828.1    LBMM01001362    KMQ96447.1    ADMH02000862    ETN64832.1    AJVK01019919    AJVK01019920    RSAL01000205    RVE44352.1    QOIP01000003    RLU24705.1    GDIP01060485    JAM43230.1    KYB26909.1    GDIP01192266    JAJ31136.1    GDIP01228262    JAI95139.1    ADTU01004954    ADTU01004955    ADTU01004956    ADTU01004957    ADTU01004958    ADTU01004959    ADTU01004960    ADTU01004961    ADTU01004962    GDIQ01136966    GDIP01083437    JAL14760.1    JAM20278.1    GDIP01228263    JAI95138.1    KQ977580    KYN01791.1    GDIP01047778    JAM55937.1    GDIP01174866    JAJ48536.1    AJ784780    CAH04899.1    HACA01024054    CDW41415.1    CCAG010009908    QCYY01001397    ROT78359.1    GDIQ01249238    JAK02487.1    AM404113    CAL49074.1    GDIQ01237894    JAK13831.1    KQ434839    KZC08031.1    GDIP01147872    JAJ75530.1    AY600515    AAT11863.1    GDIQ01078531    JAN16206.1    CVRI01000064    CRL05034.1    AE014298    AHN59332.1    GDIP01210572    JAJ12830.1    GDIP01097321    JAM06394.1    GDIQ01021020    JAN73717.1    AFH07242.1    GDHF01029131    GDHF01024402    GDHF01022787    GDHF01000901    JAI23183.1    JAI27912.1    JAI29527.1    JAI51413.1    GDIP01228264    JAI95137.1    GDIP01220521    JAJ02881.1    CH940653    KRF80757.1    GDIP01047779    JAM55936.1    CH902630    KPU77399.1    JRES01000104    KNC34109.1    CH933811    EDW06529.2    GDIP01029246    JAM74469.1    CM000162    EDX01209.2    AGB95084.1    LRGB01000930    KZS15056.1    HG326422    CDG15354.1    AGBW02007651    OWR54918.1   

Proteomes

UP000075903    UP000053825    UP000076408    UP000075920    UP000075902    UP000053268    + More
UP000092443    UP000092460    UP000069272    UP000007062    UP000075884    UP000075885    UP000075840    UP000000304    UP000069940    UP000249989    UP000075886    UP000075883    UP000218220    UP000002320    UP000094527    UP000095301    UP000078200    UP000091820    UP000076407    UP000075880    UP000092445    UP000242457    UP000008820    UP000030765    UP000000305    UP000198287    UP000092461    UP000001292    UP000008711    UP000005203    UP000079169    UP000078541    UP000078492    UP000007266    UP000192223    UP000036403    UP000000673    UP000092462    UP000283053    UP000279307    UP000005205    UP000078542    UP000092444    UP000283509    UP000076502    UP000192221    UP000183832    UP000000803    UP000008792    UP000007801    UP000037069    UP000009192    UP000002282    UP000095300    UP000076858    UP000007151   

Pfam

PF00907   T-box        + More
PF11078   Optomotor-blind

Interpro

IPR001699   TF_T-box        + More
IPR008967   p53-like_TF_DNA-bd       
IPR036960   T-box_sf       
IPR018186   TF_T-box_CS       
IPR002070   TF_Brachyury       
IPR021101   Optomoror-blind_N       

SUPFAM

SSF49417   SSF49417       

Gene 3D

2.60.40.820    

CDD

cd00182  TBOX

ProteinModelPortal

A0A182UTL1   A0A0L7R337   A0A182YJF8   A0A182WEF4   A0A182TUL4   A0A194Q1H6   + More
A0A1A9XBY6   A0A1B0B8B6   A0A336LQP0   A0A182FPM9   Q7PZ39   A0A182MXV3   A0A182PC57   A0A182HH16   B4R4H9   A0A182GG40   A0A182Q4P7   A0A182MDI3   A0A2A4K4B4   B0W0Q1   A0A1D2NGF9   A0A1I8NK26   A0A1A9VRH4   A0A1A9W8V0   A0A182XKQ9   A0A182IN80   A0A1A9ZGP3   A0A2A3EAU5   A0A0P6ITF1   Q17PY6   A0A084W8I1   A0A411DB37   E9FYB6   A0A226ELJ8   A0A1B0CJV0   A0A2W1C3A6   A0A2A4K5G9   A0A2A4K3S4   B4I0Z1   B3NU30   A0A1S4G7T0   A0A088AE04   A0A3Q0IM06   W8ATA1   A0A336M1P3   A0A195F3M1   A0A151IXY8   A0A139WFZ8   A0A143WE49   A0A1W4WCI0   A0A0J7L0X6   W5JKC9   A0A1B0DRD3   A0A437B1H7   A0A1W4WMJ5   A0A3L8DX99   A0A0P5YAM1   A0A139WG93   A0A0P5B8S3   A0A0P4YFP3   A0A158NZS4   A0A0P5P0K3   A0A0P4YIG0   A0A195CM35   A0A0P5Z9Y0   A0A0P5C6D1   Q5K2Q2   A0A0K2UTQ6   A0A1B0FJD9   A0A3R7MJH1   A0A0P5FWZ9   B1V8P7   A0A0P5H572   A0A154P856   A0A1W4UP69   A0A0P5FHZ1   Q6J4Z5   A0A0P6EDF6   A0A1J1IZB3   X2JI97   A0A1W4V1M3   A0A0P4ZPQ3   A0A0P5VPC9   A0A0N8EJD1   M9NEV8   A0A0K8UMK6   A0A0P4YQW9   A0A0N7ZR77   A0A0Q9WJN3   A0A0P5ZCM2   A0A0P8XS48   A0A0L0CRN5   B4L5S0   A0A0P6AYA2   B4Q057   A0A1I8NP30   M9PH16   A0A162CNP9   A0A077MJM1   A0A212FME5  

PDB

1H6F     E-value=1.06782e-40,     Score=412

KEGG

101735390    K10176 T-box protein 2 | (RefSeq) optomotor-blind protein-like

GO

GO:0003700   GO:0003677   GO:0005634   GO:0016021   GO:0006355   GO:0016788   GO:0046872   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR11267  

Subcellular location

Nucleus  

Length:

96

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00516

Exp number, first 60 AAs:

0.00516

Total prob of N-in:

0.21949

outside

1  -  96

 

 

Pi

298.910858

Theta

228.804007

Tajima's D

0.92788

CLR

0.604542

CSRT

0.633518324083796

Interpretation

Uncertain