SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09735
Pre Gene Modal
BGIBMGA012895
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_adenosine_deaminase_CECR1-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.195 ER   Reliability : 1.541
 

Sequence

CDS
ATGATGCTCGGTAGTGATATAAGTTTGAGTGACAGTGAAATGAAAGCGAATGATATAATAATGGATCTGAAAATAAAGGAACTCGACTATGCGTTTCATCATCCGCAAACGTTCAATTTATCTAAGCACTTTTTTGATTATAAAGACGAAGTAGAGGATACGGAGTTGTTCAAACTACTGCAGCAGATGCCGAAAGGCGCCGTACTCCACGCTCATGACACGGGCCTTTTGAGTCCAGATTATGTCCTCGAATTAACTTACATGAAAGATCTGTACGTTTGCTTCCAGAAAGGTCAAGTTCAGTTTTTGTTTTCCGAGAATATTCCGAAAACTCCTTGTGCAGTAAAATGGCAATTACTGAGCGATGCCAGACTATCGTCGAGTAATGTTGAAAAATTCGATGCGGATCTAAGAAAGCACTTTACTTTAGTTGTGAGCAATCCAAAAGAGGTTTACTCCGATGTGAATGCGGCTTGGAGGAAGTTCCAACAGTACTTCATCACGACTGGACCGCTTTTATCTTACAAACCAGTATGGGAACAATATTTCTACGACACATTGAAAGCCTTTCGGGAAGACAATGTAATGTACATTGAAATTAGAAGTGTTTTACCCGAACTGTACGATTTAGACGGAAACGTGTATGATTCTGTTGAAACCGCATTAATTTATAAAGAAGTCTTAGATCGCTTTATGGAGGATTATCCAGATTTTTATGGAGCTAAATTAATATATGCACCTTTCCGAATGGTGGATACGAAAACTGTTAAAAAATACATTGATATTGCCAAAGAAATAAAAAGATTGGCTCCAGATTTTTTAGCAGGTTTTGATTTAGTTGGTCAAGAAGATATTGGAGCACCAACTAAAGACTTTTTATCAGAGCTAGAGGAAGCAAAAAGTGAATTGGACTTCTTCTTTCACGCCGGAGAGACGAACTGGTACGGTACAAGCTCAGATGAAAACTTATTAGATGTAATAGCGCTTGACACTAAACGAATAGGCCATGCCTTTGCTCTCATTAAGCACCCTGTGCTTTTAGAGGAGGTAAAGAAGCGGGGCATAGCTTTAGAAGTTAATGTGGTGTCAAACGTTGTTTTGAAATTAGTTGATGACGTTAGGAATCATCCTTTAGCTGCATTTTTAGCTCAAGATCTGCCTGTAGTTTTGTCTAGTGATGATCCCGGTGTTTGGGAAGCAACGCCTCTGACCCATGATTTTTATGTCACTTTCCTTGGAGTAGCTAGCAGACACGCGGACCTGAAAATGTTGAAGAAACTAGCATTAAATTCGTTGTATTACAGCACATATCCGAATAAAGACAAAATAGTCCATGAATTCGAAATACGGTGGACGAAATTTATAGACAATATTGTGAAAGATAAATGGTGA
Protein
MMLGSDISLSDSEMKANDIIMDLKIKELDYAFHHPQTFNLSKHFFDYKDEVEDTELFKLLQQMPKGAVLHAHDTGLLSPDYVLELTYMKDLYVCFQKGQVQFLFSENIPKTPCAVKWQLLSDARLSSSNVEKFDADLRKHFTLVVSNPKEVYSDVNAAWRKFQQYFITTGPLLSYKPVWEQYFYDTLKAFREDNVMYIEIRSVLPELYDLDGNVYDSVETALIYKEVLDRFMEDYPDFYGAKLIYAPFRMVDTKTVKKYIDIAKEIKRLAPDFLAGFDLVGQEDIGAPTKDFLSELEEAKSELDFFFHAGETNWYGTSSDENLLDVIALDTKRIGHAFALIKHPVLLEEVKKRGIALEVNVVSNVVLKLVDDVRNHPLAAFLAQDLPVVLSSDDPGVWEATPLTHDFYVTFLGVASRHADLKMLKKLALNSLYYSTYPNKDKIVHEFEIRWTKFIDNIVKDKW

Summary

EMBL
BABH01003475    BABH01003476    DQ322663    ABC50165.1    JTDY01000431    KOB77209.1    + More
KQ459582    KPI98848.1    KQ460878    KPJ11597.1    NWSH01001926    PCG69648.1    KZ149898    PZC78640.1    ODYU01001533    SOQ37883.1    AGBW02010531    OWR48335.1    AB183871    BAF73622.1    KPJ11596.1    PCG69649.1    KPI98849.1    ODYU01001720    SOQ38311.1    PZC78639.1    AK403248    BAM19657.1    SOQ37882.1    AGBW02007651    OWR54920.1    JTDY01010697    KOB58090.1    KPI98847.1    KPJ11598.1    NWSH01000164    PCG78913.1    PZC78641.1    JRES01001077    KNC25705.1    MK075218    AYV99621.1    OUUW01000009    SPP85001.1    PZC78642.1    OWR54919.1    GAMC01017721    GAMC01017720    JAB88834.1    GAMC01017719    GAMC01017718    JAB88836.1    GDHF01010872    JAI41442.1    GAKP01016292    GAKP01016291    GAKP01016290    JAC42662.1    GBXI01015529    GBXI01007382    JAC98762.1    JAD06910.1    CH379069    EAL30951.3    KRT07791.1    JTDY01000099    KOB78871.1    D83125    BAA11812.1    PCG78912.1    CM000363    CM002912    EDX10893.1    KMZ00301.1    CH964161    EDW79986.2    CH480815    EDW41917.1    AE014296    AY058655    AF337554    AAF49306.1    AAL13884.1    AAL40913.1    AAS64976.1    AXCN02000560    CM000159    EDW94686.1    CH940647    EDW69146.1    KRF84202.1    CH954178    EDV51932.1    KA644678    AFP59307.1    CCAG010001199    BABH01003474    CH477354    EAT42833.1    JXUM01088455    KQ563703    KXJ73474.1    KQ971318    EFA00425.1    ODYU01005668    SOQ46760.1    CH902618    EDV40513.1    KPU78606.1    KOB77203.1    UFQT01000125    SSX20499.1    CH916366    EDV96206.1    GBYB01011074    JAG80841.1    CH933809    EDW17906.1    KRG05831.1    KY563447    ARK19856.1    GBYB01011075    JAG80842.1    CP012525    ALC42888.1    ALC45000.1    APCN01003684    AXCM01005713    ATLV01024134    KE525349    KFB50811.1    AAAB01008807    EAL41919.3    GEZM01077315    JAV63330.1    GFDL01005842    JAV29203.1    GL887536    EGI70831.1    CH690550    EDW29854.1    KQ435832    KOX71685.1    ADMH02000347    ETN66884.1    DS232144    EDS36038.1    EDV96205.1    KK107087    QOIP01000001    EZA59882.1    RLU27322.1    GANO01002393    JAB57478.1    KQ976641    KYM78701.1    ADTU01021661    AF234182    AAF78901.1    GEZM01008449    JAV94776.1   
Pfam
PF00962   A_deaminase        + More
PF08451   A_deaminase_N
Interpro
IPR001365   A/AMP_deaminase_dom        + More
IPR013659   A_deaminase_N       
IPR032466   Metal_Hydrolase       
IPR006331   ADGF       
SUPFAM
SSF51556   SSF51556       
PDB
3LGG     E-value=1.60015e-90,     Score=849

Ontologies

Topology

Length:
463
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00481
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00077
outside
1  -  463
 
 

Population Genetic Test Statistics

Pi
15.940826
Theta
18.028152
Tajima's D
-0.324904
CLR
144.324653
CSRT
0.285585720713964
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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