SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09734  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012894
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_adenosine_deaminase_CECR1-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.43
 

Sequence

CDS
ATGCCAACAAAATTGACTGTGTTCTTATGGCTGAGCATCATAATGCAAGCGTTTTGCAACACAACCCACGAAACAGTAAAGAAGAAAAGAAATGAACTATTTGAAAAAGAATTGGAAATGATGCTCGGACGCGACATTGTATTGAATGAAAACGAAACTAAAGTCAACGAGATATTTATGAAACTTAAAACGAAAGAACTAGACCAAGGATTCCGGCACAGACGTCCTTTTGTTTTATCCAAACACTTCTTTGAATACAAAGATGATGTCAAGAAAACTGAACTGTACAAGCTGATTAAAAAAATGCCAAAAGGTGCGGTGCTTCATGCCCACGATACTTCACTCTTAGGTCCAGATTACGTATTAGAATTAACATACTGGAAATATTTATATGTTTGTTTTATTGACGACGAAGTATTATTTAGATTTGCGAAGACTTTACCGACCACACCGTGTGCAACAAAATGGCAGCTTGTTAAAGAAGCAAGATACTCATCGGGTAATGTTGATGAATTCGATGATCATCTCCGAAAAGAGTTCACGTTAGTCGTAGATGATTATGTAAAGAAGTACCCAGATAATAATGCCATTTGGAAGAGCTTCAAGAAGTATTTCAAAACAATTTTATCGATCGTCTCTTACAAACCGGCATGGGAGCAATACTTTTACGACGCGCTAAAGGAGTATCGTCATGACAATGTATTCTTTCTTGAAGTGAGAAGTATTTTACCAACGCTTTACGATTTAGATGGAAACGTTTATGACCCAGTAGCAACCGCTGAATCATATCAGAAAGTAACTGAACAATTCATGCATGATTATCCAGATTTTATGGGTGCGAAACTTATTTACGCGCCATCTAGAGGGACAGAGCAATTTACTTTCGATGAATATTTGAGATTCGCAAAAGAAATCAAACGTAAGCTACCGGATTTCTTTGCTGGTTTCGATCTAGTCAATCACGAGGATGCGGGACCGCCAAACAAACACTTTCTACCACAATTGGTCAATGAAAAAGATAACTTGAACTACTATTTCCATGCCGCCGAAACTAATTGGAACGGAATGGATTCAGACGAAAACCTGTATGACGCTTTGGCTCTGGATACTAAACGTATCGGTCACGGATTCGCTCTGATAAAGCATCCACTTTTAATAGATGAAGTAAGAAAGAGAGATATCGCCATAGAAGTGAATGTCATTTCCAATAATGTTCTTTGTTTAGTCAGTGATATTAGGAATCACCCGCTTTCGTCTTATTTAGCGCAAGGCTTGCCTGTCGTGGTGTCGAGTGATGATCGCGGTGCATGGGAAGCGGACCCTTTGTCCCATGACTTCTATGCCGCATTCGTTGGAGTAGCCAGCCGCCATGCAGACCTGAGGCTTCTGAAAAAGCTCGCTCTGAATTCGATACGCTACAGTACGTATTCGGACAAAAGTAAAATGTTTGCTGAATTCGAAAGCCGATGGTCACAATTCATTAATGCTGTGAAAGATAAACATGTTTAG
Protein
MPTKLTVFLWLSIIMQAFCNTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKELDQGFRHRRPFVLSKHFFEYKDDVKKTELYKLIKKMPKGAVLHAHDTSLLGPDYVLELTYWKYLYVCFIDDEVLFRFAKTLPTTPCATKWQLVKEARYSSGNVDEFDDHLRKEFTLVVDDYVKKYPDNNAIWKSFKKYFKTILSIVSYKPAWEQYFYDALKEYRHDNVFFLEVRSILPTLYDLDGNVYDPVATAESYQKVTEQFMHDYPDFMGAKLIYAPSRGTEQFTFDEYLRFAKEIKRKLPDFFAGFDLVNHEDAGPPNKHFLPQLVNEKDNLNYYFHAAETNWNGMDSDENLYDALALDTKRIGHGFALIKHPLLIDEVRKRDIAIEVNVISNNVLCLVSDIRNHPLSSYLAQGLPVVVSSDDRGAWEADPLSHDFYAAFVGVASRHADLRLLKKLALNSIRYSTYSDKSKMFAEFESRWSQFINAVKDKHV

Summary

EMBL
BABH01003476    JTDY01000431    KOB77209.1    KQ459582    KPI98848.1    NWSH01001926    + More
PCG69648.1    KQ460878    KPJ11597.1    KZ149898    PZC78640.1    DQ322663    ABC50165.1    BABH01003475    AB183871    BAF73622.1    ODYU01001720    SOQ38311.1    AGBW02007651    OWR54920.1    ODYU01001533    SOQ37882.1    PCG69649.1    PZC78639.1    KPI98849.1    SOQ37883.1    KPJ11596.1    AGBW02010531    OWR48335.1    AK403248    BAM19657.1    JTDY01010697    KOB58090.1    OWR54919.1    KPJ11598.1    ODYU01005668    SOQ46760.1    PZC78642.1    BABH01003474    JRES01001077    KNC25705.1    NWSH01000164    PCG78913.1    PZC78641.1    KPI98847.1    PCG78912.1    AE014296    AY058655    AF337554    AAF49306.1    AAL13884.1    AAL40913.1    AAS64976.1    CM000363    CM002912    EDX10893.1    KMZ00301.1    CH480815    EDW41917.1    ADMH02000347    ETN66884.1    KOB77203.1    JTDY01000099    KOB78871.1    MK075218    AYV99621.1    D83125    BAA11812.1    OUUW01000009    SPP85001.1    UFQT01000125    SSX20499.1    CH379069    EAL30951.3    KRT07791.1    CH954178    EDV51932.1    AXCN02000560    CM000159    EDW94686.1    AXCM01005713    CH964161    EDW79986.2    KA644678    AFP59307.1    GDHF01010872    JAI41442.1    GBXI01015529    GBXI01007382    JAC98762.1    JAD06910.1    GAKP01016292    GAKP01016291    GAKP01016290    JAC42662.1    CH902618    EDV40513.1    KPU78606.1    CP012525    ALC42888.1    ALC45000.1    JXUM01088455    KQ563703    KXJ73474.1    GAMC01017721    GAMC01017720    JAB88834.1    GAMC01017719    GAMC01017718    JAB88836.1    CH477354    EAT42833.1    ETN66883.1    CH933809    EDW17906.1    KRG05831.1    CH940647    EDW69146.1    KRF84202.1    CCAG010001199    APCN01003684    AAAB01008807    EAL41919.3    GFDL01005072    JAV29973.1    CH690550    EDW29854.1    KQ971318    EFA00425.1    ATLV01024134    KE525349    KFB50811.1    KQ414661    KOC65564.1    GFDL01005842    JAV29203.1    KOB77204.1    DS232144    EDS36038.1    CH916366    EDV96206.1    GDRN01107117    JAI57470.1    KFB50810.1    KY563447    ARK19856.1   
Pfam
PF00962   A_deaminase        + More
PF08451   A_deaminase_N
Interpro
IPR032466   Metal_Hydrolase        + More
IPR006331   ADGF       
IPR013659   A_deaminase_N       
IPR001365   A/AMP_deaminase_dom       
SUPFAM
SSF51556   SSF51556       
PDB
3LGG     E-value=1.0672e-95,     Score=894

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.965369
 
 
Length:
502
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.02211
Exp number, first 60 AAs:
1.02058
Total prob of N-in:
0.05221
outside
1  -  502
 
 

Population Genetic Test Statistics

Pi
279.200013
Theta
214.941656
Tajima's D
1.03855
CLR
0
CSRT
0.667716614169292
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26822097 DIVINENETK 95.45 1e-09
26822097 IIGATDSSGEIMFIMK 100.00 4e-05
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