Gene

KWMTBOMO09721  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012942

Annotation

PREDICTED:_fatty_acid-binding_protein?_muscle-like_[Plutella_xylostella]

Location

Bomo_Chr16(-):8085073-8092031      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.257

CDS

ATGGAAGACTTTATTGGTGTTAAATATAAATTGAAATCCTCGGACAATTTCGACGATTATCTCAAGTTTATCGAAGTCGGTCTACTGAGCCGTAAAACAGCCAATGCAGTCTCACCGGTTTGCGTGTTGACCCGCGACAATGACGGCGTCTACACCCTGACCATGACAACAACCTTCAGAACTGTAAAAATGTCTTTTAAACTCGGCGAGGAGTTCATAGAAGAACGACCGGACGGTGCCAAGGTGAAATCTCTTTTGACGATCGAAGGAAATAAACTAATACAAACTCAAACAGAGAATAACGGAAGAAAGTCCACTCATGTACGTGAATTCACGAAGGATAAACTAACTGTGACGACAACAGCTGAAGGCTGGGACGGACGCTGCATACGAGTTTACGAAGTGCTCCCTTAA

Protein

MEDFIGVKYKLKSSDNFDDYLKFIEVGLLSRKTANAVSPVCVLTRDNDGVYTLTMTTTFRTVKMSFKLGEEFIEERPDGAKVKSLLTIEGNKLIQTQTENNGRKSTHVREFTKDKLTVTTTAEGWDGRCIRVYEVLP

Similarity

Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.

Uniprot

H9JTT0   I4DNC2   A0A194PZX5   A0A194R2V4   A0A212FN45   A0A1E1WMF0   + More
A0A2W1BHB1   A0A0K8SEJ6   A0A0L7KRL5   A0A2A4JF12   A0A194Q0K6   A0A194R6W7   S4P8B4   M4M9L0   O61236   Q0WX97   A0A212FN10   Q2QEH2   A0A0K8SYG9   B6CMG0   A0A2A4J1H5   A0A2Z5U710   Q6F440   A0A3G1T1H0   A0A1E1WC74   A0A0V0G2M9   A0A2S2PV04   T1HLW6   A0A224XNU5   A0A2H1VTL2   A0A212FMG0   R4WCK5   R4V0J3   C4WXA0   A0A2S2NIM3   A0A0A7BYM6   A0A2H8TFV6   A0A2H1VWS6   A0A023F8M4   I4DN38   Q76LA4   V9IIS4   A0A1B6GJK3   A0A0L7R215   A0A1B6DMS6   A0A310SPC1   A0A411G7C2   A0A0C9R4E4   A0A0P4VYV4   A0A0N1I4W9   A5HMP4   A0A0K8TFP0   A0A1B6KYE8   T1E383   G1K059   I4DJD9   B3P4J3   E2AWC1   A0A1B6H6S1   A0A0A9YAM3   F6MFX1   D5LXI1   A0A3L8D7Y7   A0A1B6DEJ4   A0A0C9RRJ4   A0A1D1XYS1   A0A1B6LZC8   A0A2A4AQU9   A0A0N0U575   R4WCU0   A0A182IWT0   A0A151XBY8   K7IX95   E2BJH6   A0A2H1V4G9   A0A088AE74   A0A0J7L3Z2   A0A2H8TS14   A0A1B6KEV6   A0A2A3ERN5   A0A084WE60   A0A1W4WMG9   A0A0G3YKZ9   A0A023EFS1   A0A1S3DRQ9   A0A1B6HIY1   A0A1B6HSP3   A0A1L8DZ33   Q1M0X8   A0A158P294   Q177Y4   A0A3Q0JKB5   A0A195BSW7   Q0PXX4   A0A2S2PQQ6   A0A2S2QCH1   A0A0M3QXF0   A0A139WGC8   A0A026WE75  

Pubmed

19121390    22651552    26354079    22118469    28756777    26227816    + More
23622113    9618497    17966127    18760362    23691247    25474469    14745104    27129103    26823975    24330624    21736942    17994087    20798317    25401762    30249741    20075255    24438588    25702953    24945155    26483478    21347285    17510324    18362917    19820115    24508170   

EMBL

BABH01003492    BABH01003493    AK402833    BAM19412.1    KQ459582    KPI98871.1    + More
KQ460878    KPJ11575.1    AGBW02007648    OWR55129.1    GDQN01002874    JAT88180.1    KZ150128    PZC73095.1    GBRD01014100    JAG51726.1    JTDY01006797    KOB65681.1    NWSH01001632    PCG70637.1    KPI98838.1    KPJ11606.1    GAIX01006016    JAA86544.1    KC127672    AGG56524.1    U75307    AAC24317.1    AB267808    BAF02663.1    AGBW02007650    OWR55117.1    DQ109670    DQ311348    DQ539018    EF112401    AB262579    AAZ82096.1    ABD36292.1    ABG20590.1    ABK97427.1    BAE96009.1    GBRD01007489    JAG58332.1    EU325560    KZ149898    ACB54950.1    PZC78673.1    NWSH01003893    PCG65719.1    AP017474    BBB06705.1    AB180450    BAD26694.1    MG992392    AXY94830.1    GDQN01006476    JAT84578.1    GECL01003738    JAP02386.1    GGMS01000088    MBY69291.1    ACPB03014789    GFTR01002259    JAW14167.1    ODYU01004372    SOQ44185.1    AGBW02007651    OWR54916.1    AK416948    BAN20163.1    KC632308    AGM32122.1    ABLF02030056    AK342527    BAH72520.1    GGMR01004411    MBY17030.1    KC966936    AHV85210.1    GFXV01001136    MBW12941.1    ODYU01004915    SOQ45280.1    GBBI01000966    JAC17746.1    AK402706    BAM19328.1    AB083010    BAC54131.1    JR049662    AEY61033.1    GECZ01014401    GECZ01007162    JAS55368.1    JAS62607.1    KQ414666    KOC64879.1    GEDC01010368    JAS26930.1    KQ761662    OAD57182.1    MH366001    QBB01810.1    GBYB01011169    JAG80936.1    GDKW01001862    JAI54733.1    KQ461183    KPJ07543.1    EF541361    ABQ18251.1    GBRD01001866    GDHC01009082    JAG63955.1    JAQ09547.1    GEBQ01023515    JAT16462.1    GALA01000600    JAA94252.1    JO494940    AEL79170.1    AK401407    BAM18029.1    KPI98807.1    CH954181    EDV49508.1    GL443280    EFN62281.1    GECU01037290    JAS70416.1    GBHO01013502    JAG30102.1    JF815103    AEG74454.1    GU980922    ADE27971.1    QOIP01000012    RLU16018.1    GEDC01013232    JAS24066.1    GBYB01011170    JAG80937.1    GDJX01020402    JAT47534.1    GEBQ01010987    JAT28990.1    NWMT01000107    PCC99322.1    KQ435794    KOX73671.1    AK416989    BAN20204.1    KQ982315    KYQ57859.1    AAZX01000617    AAZX01000618    GL448571    EFN84133.1    ODYU01000601    SOQ35676.1    LBMM01000937    KMQ97189.1    GFXV01004975    MBW16780.1    GEBQ01029975    JAT10002.1    KZ288192    PBC34398.1    ATLV01023157    KE525341    KFB48504.1    KM507112    AKM28436.1    JXUM01012309    JXUM01012310    GAPW01005897    KQ560351    JAC07701.1    KXJ82893.1    GECU01033030    JAS74676.1    GECU01030024    JAS77682.1    GFDF01002361    JAV11723.1    AY792955    AAX33735.1    ADTU01001164    CH477369    EAT42473.1    KQ976418    KYM89450.1    DQ673412    ABG81985.1    GGMR01019088    MBY31707.1    GGMS01006210    MBY75413.1    CP012526    ALC45813.1    KQ971345    KYB27002.1    KK107261    EZA53971.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000037510    UP000218220    + More
UP000015103    UP000007819    UP000053825    UP000008711    UP000000311    UP000279307    UP000243750    UP000053105    UP000075880    UP000075809    UP000002358    UP000008237    UP000005203    UP000036403    UP000242457    UP000030765    UP000192223    UP000069940    UP000249989    UP000079169    UP000005205    UP000008820    UP000078540    UP000092553    UP000007266    UP000053097   

PRIDE

H9JTT0    Q2QEH2    Q76LA4   

Pfam

PF00061   Lipocalin

Interpro

IPR012674   Calycin        + More
IPR031259   ILBP       
IPR000566   Lipocln_cytosolic_FA-bd_dom       
IPR000463   Fatty_acid-bd       

SUPFAM

SSF50814   SSF50814       

Gene 3D

2.40.128.20    

ProteinModelPortal

H9JTT0   I4DNC2   A0A194PZX5   A0A194R2V4   A0A212FN45   A0A1E1WMF0   + More
A0A2W1BHB1   A0A0K8SEJ6   A0A0L7KRL5   A0A2A4JF12   A0A194Q0K6   A0A194R6W7   S4P8B4   M4M9L0   O61236   Q0WX97   A0A212FN10   Q2QEH2   A0A0K8SYG9   B6CMG0   A0A2A4J1H5   A0A2Z5U710   Q6F440   A0A3G1T1H0   A0A1E1WC74   A0A0V0G2M9   A0A2S2PV04   T1HLW6   A0A224XNU5   A0A2H1VTL2   A0A212FMG0   R4WCK5   R4V0J3   C4WXA0   A0A2S2NIM3   A0A0A7BYM6   A0A2H8TFV6   A0A2H1VWS6   A0A023F8M4   I4DN38   Q76LA4   V9IIS4   A0A1B6GJK3   A0A0L7R215   A0A1B6DMS6   A0A310SPC1   A0A411G7C2   A0A0C9R4E4   A0A0P4VYV4   A0A0N1I4W9   A5HMP4   A0A0K8TFP0   A0A1B6KYE8   T1E383   G1K059   I4DJD9   B3P4J3   E2AWC1   A0A1B6H6S1   A0A0A9YAM3   F6MFX1   D5LXI1   A0A3L8D7Y7   A0A1B6DEJ4   A0A0C9RRJ4   A0A1D1XYS1   A0A1B6LZC8   A0A2A4AQU9   A0A0N0U575   R4WCU0   A0A182IWT0   A0A151XBY8   K7IX95   E2BJH6   A0A2H1V4G9   A0A088AE74   A0A0J7L3Z2   A0A2H8TS14   A0A1B6KEV6   A0A2A3ERN5   A0A084WE60   A0A1W4WMG9   A0A0G3YKZ9   A0A023EFS1   A0A1S3DRQ9   A0A1B6HIY1   A0A1B6HSP3   A0A1L8DZ33   Q1M0X8   A0A158P294   Q177Y4   A0A3Q0JKB5   A0A195BSW7   Q0PXX4   A0A2S2PQQ6   A0A2S2QCH1   A0A0M3QXF0   A0A139WGC8   A0A026WE75  

PDB

5GKB     E-value=1.89807e-18,     Score=220

KEGG

101743601    K08752 fatty acid-binding protein 3, muscle and heart | (RefSeq) fatty acid-binding protein, muscle-

GO

GO:0008289   GO:0005215   GO:0006810   GO:0016788   GO:0046872   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR11955  

Length:

137

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00171

Exp number, first 60 AAs:

0.00165

Total prob of N-in:

0.18946

outside

1  -  137

 

 

Pi

22.758623

Theta

5.709351

Tajima's D

-2.056925

CLR

233.9637

CSRT

0.00854957252137393

Interpretation

Possibly Positive selection