Gene

KWMTBOMO09720  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012890

Annotation

PREDICTED:_fatty_acid-binding_protein_1-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr16(+):8076322-8080275      View in EpiBrowser

Full name

Fatty acid-binding protein 1       + More
Fatty acid-binding protein 2      

Location in the cell

Cytoplasmic   Reliability : 3.174

CDS

ATGTCTTTCTTGGGTAAAAAATACACATTAGATAGAGAAGAAAACTTCGATGGGTTCCTTAAGTTTATCGGTCTCCCCGAAGACCAGATCCAGAAACATTCGCAGTTCAAGCCTACAGCTGTATTGACCAAGGAAGGCAACAAATACAAGTCCATCACCGTCAACACCGACGGTCCAAAGGAGTCAGTTTTTGAGTCCGGTGTGCCTTTCGACGAAGTCGTCCCAGGTGGATTCAAGGTAAAAACCATGTACATAGTCGATGGCAACACCGTAACTCAGACTGTAGAGAATCCCAATGGCATAGCAACATTCAAAAGGGAATACAGTGGCAACGAACTAAAAGTTACTGTCACAGCCGATAAATGGGACGGCACTGCCTATCGATACTACAAAGCTTAA

Protein

MSFLGKKYTLDREENFDGFLKFIGLPEDQIQKHSQFKPTAVLTKEGNKYKSITVNTDGPKESVFESGVPFDEVVPGGFKVKTMYIVDGNTVTQTVENPNGIATFKREYSGNELKVTVTADKWDGTAYRYYKA

Subunit

Monomer.

Similarity

Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.

Keywords

Cytoplasm   Lipid-binding   Transport   3D-structure   Acetylation  

Feature

chain  Fatty acid-binding protein 1

Uniprot

H9JTM8   Q2F5R6   H9JTT1   P31416   A0A2W1BFP9   A0A2A4IYF3   + More
B6CMF8   A0A2H1VZX6   P31417   A0A2A4IXI1   A0A2H1VZX7   A0A2H1V0J1   B6CMF9   A0A2A4IZR3   A0A2A4IZ24   A0A2W1BCW9   A0A2W1BK37   F8URE4   A0A2W1BCW8   A0A2A4IY62   A0A194Q1K0   A0A2H1VZW5   A0A2H1V1V6   A0A212FN08   A0A194R6U0   A0A2A4IYX0   A0A212FN12   Q2PWA4   A0A2H1W0N8   A0A194Q0Y2   A0A0N1IFX3   A0A2W1BHC4   A0A0N1I994   A0A1E1WE07   A0A3S2P8C4   O76515   A0A212FN63   A0A212FN45   A0A1E1WC74   Q2QEH2   A0A0N1I4W9   I4DJD9   S4P8B4   Q0WX97   O61236   A0A0K8SYG9   B6CMG0   A0A2A4J1H5   I4DN38   M4M9L0   B3P4J3   Q6F440   H9JTT0   A0A212FN10   A0A0N0PCC3   A0A194R6W7   Q9VGM2   A0A3G1T1H0   Q8IGA2   A0A194Q0K6   A0A2W1BHB1   A0A0C9R4E4   A0A1I8M6S3   B4HI13   R4WCK5   B4PU50   A0A0A7BYM6   A0A2H1VTL2   A0A1I8MQH5   H9JTT3   A0A0T6BBK9   A0A1A9V645   A0A0K8SEJ6   I4DNC2   A0A162NXM9   A0A194PZX5   A0A194Q064   A0A0P5TIC9   A0A0P5XGE0   A0A0P6G6Z7   A0A2A4AQU9   A0A0P5M8L4   A0A1W4WC51   A0A0P5ZZS2   A0A0N8B910   A0A194R2V4   A0A0P5IYD3   A0A0P4ZX95   A0A0P5ATF9   A0A139WGC8   A0A0P6GQJ5   A0A0P5QXR5   A0A0P5L5I2   A0A0P5M8N3   A0A0N8B2G7   A0A0P5X8U2   A0A0P6GYC8   A0A0N8BW82   A0A2H1VWS6   A0A0P5Y9G7  

Pubmed

19121390    17966127    1730603    28756777    18760362    1447782    + More
26354079    22118469    22651552    23622113    9618497    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25315136    23691247    17550304    18362917    19820115   

EMBL

BABH01003494    BABH01003501    DQ311357    AB262580    ABD36301.1    BAE96010.1    + More
BABH01003497    M77754    KZ150128    PZC73091.1    NWSH01004822    PCG64669.1    EU325558    ACB54948.1    ODYU01005494    SOQ46401.1    M77755    PCG64667.1    SOQ46400.1    ODYU01000112    SOQ34331.1    EU325559    ACB54949.1    PZC73093.1    PCG64670.1    PCG64668.1    PZC73092.1    PZC73090.1    JF896323    AEH16743.1    PZC73089.1    PCG64671.1    KQ459582    KPI98869.1    SOQ46399.1    SOQ34332.1    AGBW02007648    OWR55132.1    KQ460878    KPJ11576.1    PCG64666.1    OWR55131.1    DQ299942    ABC02870.1    SOQ46402.1    KPI98973.1    KQ460635    KPJ13423.1    PZC73094.1    KPJ13424.1    GDQN01005887    GDQN01000306    JAT85167.1    JAT90748.1    RSAL01000205    RVE44355.1    AF074436    AAC25674.1    OWR55130.1    OWR55129.1    GDQN01006476    JAT84578.1    DQ109670    DQ311348    DQ539018    EF112401    AB262579    AAZ82096.1    ABD36292.1    ABG20590.1    ABK97427.1    BAE96009.1    KQ461183    KPJ07543.1    AK401407    BAM18029.1    KPI98807.1    GAIX01006016    JAA86544.1    AB267808    BAF02663.1    U75307    AAC24317.1    GBRD01007489    JAG58332.1    EU325560    KZ149898    ACB54950.1    PZC78673.1    NWSH01003893    PCG65719.1    AK402706    BAM19328.1    KC127672    AGG56524.1    CH954181    EDV49508.1    AB180450    BAD26694.1    BABH01003492    BABH01003493    AGBW02007650    OWR55117.1    KPJ13422.1    KPJ11606.1    AE014297    BT001757    BT001835    KX532042    AAN13512.1    AAN71512.1    AAN71590.1    ANY27852.1    MG992392    AXY94830.1    BT001880    AAN71654.1    KPI98838.1    PZC73095.1    GBYB01011169    JAG80936.1    CH480815    EDW42595.1    AK416948    BAN20163.1    CM000160    EDW97700.1    KC966936    AHV85210.1    ODYU01004372    SOQ44185.1    LJIG01002210    KRT84730.1    GBRD01014100    JAG51726.1    AK402833    BAM19412.1    LRGB01000512    KZS18353.1    KPI98871.1    KPI98972.1    GDIP01127413    JAL76301.1    GDIP01074122    JAM29593.1    GDIQ01048086    JAN46651.1    NWMT01000107    PCC99322.1    GDIQ01159142    JAK92583.1    GDIP01049618    JAM54097.1    GDIQ01200979    JAK50746.1    KPJ11575.1    GDIQ01209026    JAK42699.1    GDIP01207352    JAJ16050.1    GDIP01199099    JAJ24303.1    KQ971345    KYB27002.1    GDIQ01030122    JAN64615.1    GDIQ01117457    JAL34269.1    GDIQ01199678    JAK52047.1    GDIQ01159141    JAK92584.1    GDIQ01219323    JAK32402.1    GDIP01087762    JAM15953.1    GDIQ01048085    JAN46652.1    GDIQ01138803    JAL12923.1    ODYU01004915    SOQ45280.1    GDIP01062520    JAM41195.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000283053    + More
UP000008711    UP000000803    UP000095301    UP000001292    UP000002282    UP000078200    UP000076858    UP000243750    UP000192221    UP000007266   

PRIDE

H9JTM8    Q2F5R6    H9JTT1    Q2QEH2    H9JTT0    Q9VGM2    + More
Q8IGA2    H9JTT3   

Pfam

PF00061   Lipocalin

Interpro

IPR031259   ILBP        + More
IPR012674   Calycin       
IPR000463   Fatty_acid-bd       
IPR000566   Lipocln_cytosolic_FA-bd_dom       

SUPFAM

SSF50814   SSF50814       

Gene 3D

2.40.128.20    

ProteinModelPortal

H9JTM8   Q2F5R6   H9JTT1   P31416   A0A2W1BFP9   A0A2A4IYF3   + More
B6CMF8   A0A2H1VZX6   P31417   A0A2A4IXI1   A0A2H1VZX7   A0A2H1V0J1   B6CMF9   A0A2A4IZR3   A0A2A4IZ24   A0A2W1BCW9   A0A2W1BK37   F8URE4   A0A2W1BCW8   A0A2A4IY62   A0A194Q1K0   A0A2H1VZW5   A0A2H1V1V6   A0A212FN08   A0A194R6U0   A0A2A4IYX0   A0A212FN12   Q2PWA4   A0A2H1W0N8   A0A194Q0Y2   A0A0N1IFX3   A0A2W1BHC4   A0A0N1I994   A0A1E1WE07   A0A3S2P8C4   O76515   A0A212FN63   A0A212FN45   A0A1E1WC74   Q2QEH2   A0A0N1I4W9   I4DJD9   S4P8B4   Q0WX97   O61236   A0A0K8SYG9   B6CMG0   A0A2A4J1H5   I4DN38   M4M9L0   B3P4J3   Q6F440   H9JTT0   A0A212FN10   A0A0N0PCC3   A0A194R6W7   Q9VGM2   A0A3G1T1H0   Q8IGA2   A0A194Q0K6   A0A2W1BHB1   A0A0C9R4E4   A0A1I8M6S3   B4HI13   R4WCK5   B4PU50   A0A0A7BYM6   A0A2H1VTL2   A0A1I8MQH5   H9JTT3   A0A0T6BBK9   A0A1A9V645   A0A0K8SEJ6   I4DNC2   A0A162NXM9   A0A194PZX5   A0A194Q064   A0A0P5TIC9   A0A0P5XGE0   A0A0P6G6Z7   A0A2A4AQU9   A0A0P5M8L4   A0A1W4WC51   A0A0P5ZZS2   A0A0N8B910   A0A194R2V4   A0A0P5IYD3   A0A0P4ZX95   A0A0P5ATF9   A0A139WGC8   A0A0P6GQJ5   A0A0P5QXR5   A0A0P5L5I2   A0A0P5M8N3   A0A0N8B2G7   A0A0P5X8U2   A0A0P6GYC8   A0A0N8BW82   A0A2H1VWS6   A0A0P5Y9G7  

PDB

1MDC     E-value=2.51337e-29,     Score=314

KEGG

101743740    K08750 fatty acid-binding protein 1, liver | (RefSeq) fatty acid-binding protein 1-like

GO

GO:0008289   GO:0005737   GO:0005829   GO:0005654   GO:0007616   GO:0005215   GO:0006810   GO:0016788   GO:0046872   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR11955  

Subcellular location

Cytoplasm  

Length:

132

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.17375

outside

1  -  132

 

 

Pi

154.547412

Theta

149.23951

Tajima's D

0.093655

CLR

138.005397

CSRT

0.388630568471576

Interpretation

Uncertain