Gene

KWMTBOMO09719  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012943

Annotation

fatty_acid_binding_protein_[Bombyx_mori]

Location

Bomo_Chr16(-):8041646-8046172      View in EpiBrowser

Full name

Fatty acid-binding protein 1       + More
Fatty acid-binding protein 2      

Location in the cell

Cytoplasmic   Reliability : 2.932

CDS

ATGTCTTTCTTGGGTAAAAAATACACATTCGATAGAGGAGAAAACTTCGATGAGTTCCTTAAGCTTATCGGTCTCCCCGAAGACCAGATCCAGAAACATTTTCAGTTCAAGCCTACAACTACATTGATCAAGGAAGGCGACAAATACAAGATCATCACCGTCCATAATGACGATACAAAGGAGACAGTTTTTGAGTCCGGTGTGCCTTTCGACGAAACCATCGATGGTGGATTGAAGCTAAAAACCACGTACACAGTCGATGGCAACACCGTAACTCAAGTTATAGAGCATCCCAATGGCAACACAACATTCAAAAGGGAATATAGTGACACCGAACTAAAAGTTACTATCACAGCTGAAAATTGGGACGGCACTGCCTATCAATACTACAATGCTTAA

Protein

MSFLGKKYTFDRGENFDEFLKLIGLPEDQIQKHFQFKPTTTLIKEGDKYKIITVHNDDTKETVFESGVPFDETIDGGLKLKTTYTVDGNTVTQVIEHPNGNTTFKREYSDTELKVTITAENWDGTAYQYYNA

Subunit

Monomer.

Similarity

Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
Belongs to the mitochondrial carrier (TC 2.A.29) family.

Keywords

Cytoplasm   Lipid-binding   Transport   3D-structure   Acetylation  

Feature

chain  Fatty acid-binding protein 1

Uniprot

H9JTT1   Q2F5R6   H9JTM8   P31416   A0A2A4IYF3   B6CMF8   + More
A0A2W1BFP9   P31417   A0A2H1V0J1   A0A2A4IXI1   A0A2W1BCW8   A0A194Q1K0   B6CMF9   A0A2A4IY62   A0A2A4IZ24   F8URE4   A0A2H1VZX6   A0A2A4IYX0   A0A2W1BCW9   A0A2H1VZX7   A0A194R6U0   A0A2H1VZW5   A0A212FN08   A0A2A4IZR3   Q2PWA4   A0A2H1V1V6   A0A2W1BHC4   A0A2W1BK37   A0A2H1W0N8   A0A194Q0Y2   A0A3S2P8C4   A0A0N1IFX3   A0A1E1WE07   A0A212FN12   O76515   A0A0N1I994   A0A212FN63   Q2QEH2   A0A1E1WC74   A0A0N1I4W9   I4DJD9   Q0WX97   O61236   A0A0N0PCC3   A0A0K8SYG9   B6CMG0   M4M9L0   I4DN38   A0A2A4J1H5   A0A212FN10   Q6F440   S4P8B4   B3P4J3   A0A194Q064   A0A3G1T1H0   A0A212FN45   Q9VGM2   A0A0T6BBK9   Q8IGA2   B4PU50   A0A2A4AQU9   A0A1I8M6S3   A0A139WGC8   B4HI13   A0A1I8MQH5   A0A0A7BYM6   A0A0M3QXF0   A0A2H1V4G9   A0A1W4WC51   A0A0C9R4E4   J3JTW6   A0A179I297   B4JUP9   B4M5D7   A0A162N623   Q8INK3   B4KDZ9   A0A1Q3F8S3   T1DJZ8   A0A182VXR6   D2A4Y9   B3M0Y2   Q8UVG7   A0A1Y1NDG9   F5HLQ7   A0A182PUC3   A0A2M3YZB1   A0A182FP88   A0A023EFS1   A0A1W4WNF7   Q177Y4   A0A084WE60   A0A0N4VBQ9   A0A1A9V645   A0A0L0BNS4   A0A2M4CU83   W8BF38   A0A310SPC1   A0A1L8EC06  

Pubmed

19121390    17966127    1730603    18760362    28756777    1447782    + More
26354079    22118469    22651552    9618497    23622113    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    25315136    18362917    19820115    22516182    23537049    27071652    12869198    23594743    28004739    12364791    14747013    17210077    24945155    26483478    17510324    24438588    26108605    24495485   

EMBL

BABH01003497    BABH01003501    DQ311357    AB262580    ABD36301.1    BAE96010.1    + More
BABH01003494    M77754    NWSH01004822    PCG64669.1    EU325558    ACB54948.1    KZ150128    PZC73091.1    M77755    ODYU01000112    SOQ34331.1    PCG64667.1    PZC73089.1    KQ459582    KPI98869.1    EU325559    ACB54949.1    PZC73093.1    PCG64671.1    PCG64668.1    JF896323    AEH16743.1    ODYU01005494    SOQ46401.1    PCG64666.1    PZC73092.1    SOQ46400.1    KQ460878    KPJ11576.1    SOQ46399.1    AGBW02007648    OWR55132.1    PCG64670.1    DQ299942    ABC02870.1    SOQ34332.1    PZC73094.1    PZC73090.1    SOQ46402.1    KPI98973.1    RSAL01000205    RVE44355.1    KQ460635    KPJ13423.1    GDQN01005887    GDQN01000306    JAT85167.1    JAT90748.1    OWR55131.1    AF074436    AAC25674.1    KPJ13424.1    OWR55130.1    DQ109670    DQ311348    DQ539018    EF112401    AB262579    AAZ82096.1    ABD36292.1    ABG20590.1    ABK97427.1    BAE96009.1    GDQN01006476    JAT84578.1    KQ461183    KPJ07543.1    AK401407    BAM18029.1    KPI98807.1    AB267808    BAF02663.1    U75307    AAC24317.1    KPJ13422.1    GBRD01007489    JAG58332.1    EU325560    KZ149898    ACB54950.1    PZC78673.1    KC127672    AGG56524.1    AK402706    BAM19328.1    NWSH01003893    PCG65719.1    AGBW02007650    OWR55117.1    AB180450    BAD26694.1    GAIX01006016    JAA86544.1    CH954181    EDV49508.1    KPI98972.1    MG992392    AXY94830.1    OWR55129.1    AE014297    BT001757    BT001835    KX532042    AAN13512.1    AAN71512.1    AAN71590.1    ANY27852.1    LJIG01002210    KRT84730.1    BT001880    AAN71654.1    CM000160    EDW97700.1    NWMT01000107    PCC99322.1    KQ971345    KYB27002.1    CH480815    EDW42595.1    KC966936    AHV85210.1    CP012526    ALC45813.1    ODYU01000601    SOQ35676.1    GBYB01011169    JAG80936.1    APGK01053973    BT126675    KB741240    KB632257    AEE61638.1    ENN72097.1    ERL90786.1    LUKN01003848    OAQ96856.1    CH916374    EDV91219.1    CH940652    EDW59848.1    AZHF01000004    OAA76109.1    AAN13511.1    CH933806    EDW16020.1    GFDL01011093    JAV23952.1    GAMD01001196    JAB00395.1    EFA05702.1    CH902617    EDV43211.2    CU207343    BC049060    AF448057    AAH49060.1    AAL40832.1    GEZM01006856    JAV95618.1    AAAB01008904    EGK97217.1    EGK97218.1    GGFM01000835    MBW21586.1    JXUM01012309    JXUM01012310    GAPW01005897    KQ560351    JAC07701.1    KXJ82893.1    CH477369    EAT42473.1    ATLV01023157    KE525341    KFB48504.1    UXUI01008931    VDD92708.1    JRES01001582    KNC21740.1    GGFL01004726    MBW68904.1    GAMC01009263    JAB97292.1    KQ761662    OAD57182.1    GFDG01002529    JAV16270.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000283053    + More
UP000008711    UP000000803    UP000002282    UP000243750    UP000095301    UP000007266    UP000001292    UP000092553    UP000192221    UP000019118    UP000030742    UP000001070    UP000008792    UP000076881    UP000009192    UP000075920    UP000007801    UP000000437    UP000007062    UP000075885    UP000069272    UP000069940    UP000249989    UP000192223    UP000008820    UP000030765    UP000038041    UP000274131    UP000078200    UP000037069   

PRIDE

H9JTT1    Q2F5R6    H9JTM8    Q2QEH2    Q9VGM2    Q8IGA2    + More
Q8INK3   

Pfam

PF00061   Lipocalin        + More
PF00153   Mito_carr

Interpro

IPR031259   ILBP        + More
IPR012674   Calycin       
IPR000463   Fatty_acid-bd       
IPR000566   Lipocln_cytosolic_FA-bd_dom       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR023395   Mt_carrier_dom_sf       

SUPFAM

SSF50814   SSF50814        + More
SSF103506   SSF103506       

Gene 3D

2.40.128.20     1.50.40.10    

ProteinModelPortal

H9JTT1   Q2F5R6   H9JTM8   P31416   A0A2A4IYF3   B6CMF8   + More
A0A2W1BFP9   P31417   A0A2H1V0J1   A0A2A4IXI1   A0A2W1BCW8   A0A194Q1K0   B6CMF9   A0A2A4IY62   A0A2A4IZ24   F8URE4   A0A2H1VZX6   A0A2A4IYX0   A0A2W1BCW9   A0A2H1VZX7   A0A194R6U0   A0A2H1VZW5   A0A212FN08   A0A2A4IZR3   Q2PWA4   A0A2H1V1V6   A0A2W1BHC4   A0A2W1BK37   A0A2H1W0N8   A0A194Q0Y2   A0A3S2P8C4   A0A0N1IFX3   A0A1E1WE07   A0A212FN12   O76515   A0A0N1I994   A0A212FN63   Q2QEH2   A0A1E1WC74   A0A0N1I4W9   I4DJD9   Q0WX97   O61236   A0A0N0PCC3   A0A0K8SYG9   B6CMG0   M4M9L0   I4DN38   A0A2A4J1H5   A0A212FN10   Q6F440   S4P8B4   B3P4J3   A0A194Q064   A0A3G1T1H0   A0A212FN45   Q9VGM2   A0A0T6BBK9   Q8IGA2   B4PU50   A0A2A4AQU9   A0A1I8M6S3   A0A139WGC8   B4HI13   A0A1I8MQH5   A0A0A7BYM6   A0A0M3QXF0   A0A2H1V4G9   A0A1W4WC51   A0A0C9R4E4   J3JTW6   A0A179I297   B4JUP9   B4M5D7   A0A162N623   Q8INK3   B4KDZ9   A0A1Q3F8S3   T1DJZ8   A0A182VXR6   D2A4Y9   B3M0Y2   Q8UVG7   A0A1Y1NDG9   F5HLQ7   A0A182PUC3   A0A2M3YZB1   A0A182FP88   A0A023EFS1   A0A1W4WNF7   Q177Y4   A0A084WE60   A0A0N4VBQ9   A0A1A9V645   A0A0L0BNS4   A0A2M4CU83   W8BF38   A0A310SPC1   A0A1L8EC06  

PDB

1MDC     E-value=1.12045e-24,     Score=274

KEGG

101743891    K08752 fatty acid-binding protein 3, muscle and heart | (RefSeq) fatty acid-binding protein 1-like

GO

GO:0008289   GO:0005737   GO:0005829   GO:0005654   GO:0007616   GO:0043009   GO:0001947   GO:0007507   GO:0016021   GO:0022857   GO:0005215   GO:0006810   GO:0016788   GO:0046872   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR11955  

Subcellular location

Cytoplasm  

Length:

132

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.12738

outside

1  -  132

 

 

Pi

134.810252

Theta

135.300694

Tajima's D

-0.282961

CLR

1.033146

CSRT

0.295185240737963

Interpretation

Uncertain