Gene

KWMTBOMO09710

Annotation

PREDICTED:_mucin-2-like_[Amyelois_transitella]

Location

Bomo_Chr16(+):7919933-7923074      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.868

CDS

ATGTCGTCAGGTAGTTATTTATTAAATGTGCCGAAATTAAAAGGACGCGAAAATTATGACGACTGGGCATTCGCAGCAAGAAACTTTCTTATCTTGGAAGGCATAGACATCGACGCCATTCCGGTTGATTTGAGTCATGCCGAAGACCGAAAAGCGAAAGCAAAACTCGTCATGACCATTGATCCCAAGCTATATGTGCACATCAAAAATGAAACCAAAGTCAAGGATTTGTGGCAGAAACTACAAAAGTTATTCGATGACAGCGGGTTCACAAGAAAAATCAGCCTACTTCGAACACTGATATCCATTCGACTTGATAATTGTGAATCCATGACAAGTTACGTAAGTCAGATAGTGGAAACTGCACAAAGACTAAAAGGTACAGGGTTTGAAATTAATGAGGAATGGATCGGATCATTGCTGTTGGCGGGGCTGCCAGAAAAGTTTGCCCCGATGATTATGGCAATAGAACACTCCGGAATTGCCATAAATTCTGATGTCATAAAAACCAAATTGCTTGATATGAGTTCTGAGGTAGGTGACCATGACTCAGAAATTGCATTATGGTCGAAACAAAAACGAAGGGTAGATCAAAATTTTAATAAAAAATTTGAAAAACCAACTTCAAATTACACGCAAAATGTAAAAAAGATTATAAAATGCTACAAGTGCAAGAAAATTGGCCATTTTAAGAATCAGTGTCCTGAATTGAAAGAAAAGCAAGTAAACGCATTTAGTGCTGCTTTTTTTCATAGTGAATTTAATAGGGAAGACTGGTATATCGACTCAGGGGCTAGTGCTCATATGACATCAAGCAAAGAAAACTTATTGCAAGTGAGAAAAGTACACGATATGAAGGAAATTATTGTTGCAAATAATATGACTGTGCCAGTAGTGTGTGCCGGAAATTCACAGATTACTACTGTTGTGAATAATTCTCAGTTTGATATTAAGGTAAACAACATTTTATACATACCTAATCTAACAACAAACTTATTGTCAGTAAGCCAGTTGATAGCAAGAGGAAACAAAGTTTCTTTCAAAAGTGATGTATGTTATATACATAATCAACGAAATGAGCTTATTGGAATAGCAAATCTACAAAATGGTGTGTATAAGTTGAATACAGTAAGATCAGAGAAAGTGTTGGCGGCAGCAGTTCAGACTACAGATGCAAAACAGTGGCACAGAAGATTGGGACACATTAATAGTAATGATTTGCAGAAGATGAAAAATGGTGCTGTAGACGGAATATCGTTTGATATGAAGGCTAATATAAAAAAATCCAACTGTCAAGTATGTTGTGAAGGGAAACAGAGTCGTTTACCGTTTCAATTACGAAACCATAGAAGTACAGAATTGCTAGATTTAGTTCACTCAGATCTGTGTGGGCCTATGGAGGTTCGATCGATTGGACAGGCAAGATATTTTCTATTGTTTGTTGACGATGCTAGCAGGATGGCTTTTGTATATTTTATAAAGGAGAAGAATCAGACTCTACAGCGTTTCAAGGAATTTCAAAAAATGGTTGAGAATCAAAAAGGAACAAAGATAAAAACATTGAGAACCGACAATGGAGGGGAGTTTTCTTCAGATATGATGGAAAATTATCTGATAGATAGTGGAATTATCCATCAGAAGACGAACCCATATACTCCGGAGCAGAATGGTCTCAGCGAACGTTTCAACAGGACTATAGTTGAACGTGCAAGATGTTTATTGTTCGAGGCCAAACTGGATAAAAGTTTTTGGGCAGAAGCAGTTAACACGGCAGTATACTTGAAAAATAGATCACCGGCTTCAGGTTTGGACCAAAAGACACCGATTGAAGTATGGACAGGACAAAAGCCTGATCTCAGTCATGTCAGAATATTTGGGAGCCCAGTAATGATGCATGTTCCTAAAAATAAAAGATTGAAATGGGACAAGAAAGCAGTTCAATTCATATTAGTGGGGTATCCAGAGAATGTAAAAGGCTACAGATTGTACAACTTAGAAACTAGAAAAATATGTACCAGCAGAGATGTCATTGTAATGGAACCAGATACTACTCAAATAGAAATAAACGAAGGACAGATAGAAAAACAGCAGTCAGCACAAGAGGAAAGTTCTACTGAAGAAAGTGAAATAACATTGACAAATCAGGATGATCCCACTTATGTATATGATTCAGAAAAAAGTACAACTTCTACTGAAGGAGACTCTTATCAGACATTATCTGAAGAAGAAGAGCTATCTGAGAAAGAAGAGCCTCGATTGGTGGAAAAGCGTACCAGGAAACCTCCTGAAAGGTATGGTTTTACCAATCTTTGTATTTCAGATGAACCAGAGTCTTGGTTTGAAGACATAACTTATGATGAAGCTACCAACGGTCCAGAGAAAGACAAGTGGCAGCAGGCTATGTCTGATGAACTTCAAGCGTTTGAAGACAACCAAGCGTGGGAGATTGTTAAACAAGAGGAGGCAGATAGAGTAGTACAGTGCAAATGGGTGTTCAAGAAAAAGCTAGAAAGCAATAACAGTGTTAGGTAA

Protein

MSSGSYLLNVPKLKGRENYDDWAFAARNFLILEGIDIDAIPVDLSHAEDRKAKAKLVMTIDPKLYVHIKNETKVKDLWQKLQKLFDDSGFTRKISLLRTLISIRLDNCESMTSYVSQIVETAQRLKGTGFEINEEWIGSLLLAGLPEKFAPMIMAIEHSGIAINSDVIKTKLLDMSSEVGDHDSEIALWSKQKRRVDQNFNKKFEKPTSNYTQNVKKIIKCYKCKKIGHFKNQCPELKEKQVNAFSAAFFHSEFNREDWYIDSGASAHMTSSKENLLQVRKVHDMKEIIVANNMTVPVVCAGNSQITTVVNNSQFDIKVNNILYIPNLTTNLLSVSQLIARGNKVSFKSDVCYIHNQRNELIGIANLQNGVYKLNTVRSEKVLAAAVQTTDAKQWHRRLGHINSNDLQKMKNGAVDGISFDMKANIKKSNCQVCCEGKQSRLPFQLRNHRSTELLDLVHSDLCGPMEVRSIGQARYFLLFVDDASRMAFVYFIKEKNQTLQRFKEFQKMVENQKGTKIKTLRTDNGGEFSSDMMENYLIDSGIIHQKTNPYTPEQNGLSERFNRTIVERARCLLFEAKLDKSFWAEAVNTAVYLKNRSPASGLDQKTPIEVWTGQKPDLSHVRIFGSPVMMHVPKNKRLKWDKKAVQFILVGYPENVKGYRLYNLETRKICTSRDVIVMEPDTTQIEINEGQIEKQQSAQEESSTEESEITLTNQDDPTYVYDSEKSTTSTEGDSYQTLSEEEELSEKEEPRLVEKRTRKPPERYGFTNLCISDEPESWFEDITYDEATNGPEKDKWQQAMSDELQAFEDNQAWEIVKQEEADRVVQCKWVFKKKLESNNSVR

Uniprot

A0A212F7V4   A0A1Y1N668   A0A1Y1N932   V5GAG2   A0A1Y1N6L8   A0A0J7NHJ8   + More
A0A194RJV9   A0A182GZK6   A0A194RU38   A0A2A4J959   A0A1Y1NAZ7   A0A2A4JRI1   A0A1Y1N664   A0A1Y1LWI3   A0A224XA26   A0A0A1WXQ3   W4VRQ4   A0A0A9XVJ9   A0A0A9Z683   A0A1W7R657   W4VRP9   W4VRP2   A0A1W7R6H6   A0A1W7R670   A0A034VP70   A0A0A9WPH5   A0A1W7R663   A0A1W7R6K6   A0A1W7R6J6   A0A0A9XEY5   A0A085MVP5   A0A0A9WRE3   A0A0N1ICY1   A0A0V1FKH2   A0A0V1K1Y9   A0A0V1F2E6   A0A2J7Q1Z2   A0A0V1APS7   A0A085N572   A0A0V0T3I0   A0A2J7RKJ6   A0A2J7R8S8   A0A2J7R668   A0A0V0TUP0   A0A0A9WQD4   A0A0A9YFM0   A0A0V0Z6Q0   A0A1B6E9D0   A0A146LFV8   A0A0V0WR33   A0A1Y1LYU4   A0A0J7KG03   K7J8U2   A0A0N1IFR1   A0A0V0WQU6   K7J5Z3   A0A0A9XBM0   A0A0K8U6S2   A0A224X581   A0A1Y1N3X2   A0A182GZN1   A0A0J7K6W1   A0A085MSF4   A0A0K8U956   A0A0V0RWJ3   W8AEF0   T1PKV2   A0A0V0YNF4   K7JBY9   A0A0A1XLZ7   W8BFA2   W8AUM1   W8AL23   A0A0V1NJN8   W8B528   A0A0A1WGJ2   A0A0A1XSW5   A0A0V1GS48   A0A085N9K0   A0A0V0RDY1   A0A085NQR3   A0A0V0V098   A0A0K8W4G0   A0A438JWX0   W8AQ86   W8APZ4   A0A0V1MGJ0   W8ANX7  

Pubmed

22118469    28004739    26354079    26483478    25830018    25401762    + More
25348373    24929829    26823975    20075255    24495485    30458008   

EMBL

AGBW02009826    OWR49812.1    GEZM01011856    JAV93393.1    GEZM01011857    JAV93390.1    + More
GALX01001351    JAB67115.1    GEZM01011858    GEZM01011854    JAV93389.1    LBMM01004924    KMQ91985.1    KQ460297    KPJ16236.1    JXUM01099713    KQ564513    KXJ72145.1    KQ459875    KPJ19636.1    NWSH01002292    PCG68657.1    PCG68658.1    GEZM01011855    JAV93396.1    NWSH01000816    PCG74073.1    GEZM01011859    JAV93384.1    GEZM01045162    JAV77889.1    GFTR01008662    JAW07764.1    GBXI01011094    JAD03198.1    GANO01000510    JAB59361.1    GBHO01020706    JAG22898.1    GBHO01003630    JAG39974.1    GEHC01000991    JAV46654.1    GANO01000659    JAB59212.1    GANO01000660    JAB59211.1    GEHC01000990    JAV46655.1    GEHC01000989    JAV46656.1    GAKP01015352    JAC43600.1    GBHO01033237    JAG10367.1    GEHC01000988    JAV46657.1    GEHC01000867    JAV46778.1    GEHC01000868    JAV46777.1    GBHO01026221    JAG17383.1    KL367628    KFD61291.1    GBHO01033235    JAG10369.1    KQ460882    KPJ11482.1    JYDT01000069    KRY86576.1    JYDS01000009    JYDV01000021    KRZ33483.1    KRZ41218.1    JYDR01000001    KRY80095.1    NEVH01019375    PNF22597.1    JYDH01000330    KRY26802.1    KL367553    KFD64618.1    JYDJ01000808    KRX33413.1    NEVH01002725    PNF41351.1    NEVH01006721    PNF37230.1    NEVH01006980    PNF36330.1    JYDJ01000136    KRX42725.1    GBHO01036544    JAG07060.1    GBHO01011746    GBHO01011744    GBHO01011742    JAG31858.1    JAG31860.1    JAG31862.1    JYDQ01000379    KRY07987.1    GEDC01002834    JAS34464.1    GDHC01012180    JAQ06449.1    JYDK01000071    KRX78146.1    GEZM01045163    JAV77888.1    LBMM01008124    KMQ89126.1    AAZX01000499    KQ460208    KPJ16606.1    KRX78123.1    GBHO01026200    JAG17404.1    GDHF01030254    JAI22060.1    GFTR01008771    JAW07655.1    GEZM01013472    GEZM01013471    GEZM01013470    JAV92539.1    JXUM01099923    KQ564528    KXJ72133.1    LBMM01012645    KMQ86082.1    KL367691    KFD60150.1    GDHF01029191    JAI23123.1    JYDL01000068    KRX18751.1    GAMC01019995    JAB86560.1    KA648745    AFP63374.1    JYDU01000001    KRY01876.1    AAZX01000798    GBXI01002679    JAD11613.1    GAMC01018156    JAB88399.1    GAMC01018157    JAB88398.1    GAMC01019998    JAB86557.1    JYDM01000185    KRZ84108.1    GAMC01018154    JAB88401.1    GBXI01016677    JAC97614.1    GBXI01000292    JAD14000.1    JYDP01000350    KRZ01021.1    KL367527    KFD66146.1    JYDL01000297    KRX12674.1    KL367480    KFD71809.1    JYDN01000113    KRX56900.1    GDHF01006360    JAI45954.1    QGNW01000024    RVX13462.1    GAMC01018338    JAB88217.1    GAMC01019997    JAB86558.1    JYDO01000104    KRZ71003.1    GAMC01020352    JAB86203.1   

Proteomes

UP000007151    UP000036403    UP000053240    UP000069940    UP000249989    UP000218220    + More
UP000054995    UP000054805    UP000054826    UP000054632    UP000235965    UP000054776    UP000055048    UP000054783    UP000054673    UP000002358    UP000054630    UP000054815    UP000054924    UP000055024    UP000054681    UP000288805    UP000054843   

Pfam

PF13976   gag_pre-integrs        + More
PF00098   zf-CCHC
PF00665   rve
PF07727   RVT_2
PF13961   DUF4219
PF00078   RVT_1

Interpro

IPR025724   GAG-pre-integrase_dom        + More
IPR036397   RNaseH_sf       
IPR001584   Integrase_cat-core       
IPR039537   Retrotran_Ty1/copia-like       
IPR036875   Znf_CCHC_sf       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR013103   RVT_2       
IPR025314   DUF4219       
IPR000477   RT_dom       

SUPFAM

SSF53098   SSF53098        + More
SSF57756   SSF57756       

Gene 3D

3.30.420.10    

ProteinModelPortal

A0A212F7V4   A0A1Y1N668   A0A1Y1N932   V5GAG2   A0A1Y1N6L8   A0A0J7NHJ8   + More
A0A194RJV9   A0A182GZK6   A0A194RU38   A0A2A4J959   A0A1Y1NAZ7   A0A2A4JRI1   A0A1Y1N664   A0A1Y1LWI3   A0A224XA26   A0A0A1WXQ3   W4VRQ4   A0A0A9XVJ9   A0A0A9Z683   A0A1W7R657   W4VRP9   W4VRP2   A0A1W7R6H6   A0A1W7R670   A0A034VP70   A0A0A9WPH5   A0A1W7R663   A0A1W7R6K6   A0A1W7R6J6   A0A0A9XEY5   A0A085MVP5   A0A0A9WRE3   A0A0N1ICY1   A0A0V1FKH2   A0A0V1K1Y9   A0A0V1F2E6   A0A2J7Q1Z2   A0A0V1APS7   A0A085N572   A0A0V0T3I0   A0A2J7RKJ6   A0A2J7R8S8   A0A2J7R668   A0A0V0TUP0   A0A0A9WQD4   A0A0A9YFM0   A0A0V0Z6Q0   A0A1B6E9D0   A0A146LFV8   A0A0V0WR33   A0A1Y1LYU4   A0A0J7KG03   K7J8U2   A0A0N1IFR1   A0A0V0WQU6   K7J5Z3   A0A0A9XBM0   A0A0K8U6S2   A0A224X581   A0A1Y1N3X2   A0A182GZN1   A0A0J7K6W1   A0A085MSF4   A0A0K8U956   A0A0V0RWJ3   W8AEF0   T1PKV2   A0A0V0YNF4   K7JBY9   A0A0A1XLZ7   W8BFA2   W8AUM1   W8AL23   A0A0V1NJN8   W8B528   A0A0A1WGJ2   A0A0A1XSW5   A0A0V1GS48   A0A085N9K0   A0A0V0RDY1   A0A085NQR3   A0A0V0V098   A0A0K8W4G0   A0A438JWX0   W8AQ86   W8APZ4   A0A0V1MGJ0   W8ANX7  

PDB

1C1A     E-value=0.00270093,     Score=100

KEGG

NA   

GO

GO:0015074   GO:0000943   GO:0003676   GO:0008270   GO:0003964   GO:0008449   GO:0030203   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR11439  

Length:

843

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00874999999999998

Exp number, first 60 AAs:

0.00057

Total prob of N-in:

0.00026

outside

1  -  843

 

 

Pi

52.437282

Theta

122.770114

Tajima's D

-1.453695

CLR

220.842516

CSRT

0.0694465276736163

Interpretation

Uncertain