Gene

KWMTBOMO09709  Validated by peptides from experiments

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr16(-):7909054-7919842      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.978

CDS

ATGGCAAGAGCATACTTGGAGAACACGATAATAGTCAACAAAGGATCCATAGAAAGAGCCAAAGCCCAGATTAGTAGGCTTTGCGCATTGAAATCATTGTTGCCTACTTTCTTTGATGGCTACAAGTCCCGAAGCGATTTGCTGGAAACGAAAAAATACCTTTTACAAGCCTGGTTGCCGAGAATGACAGAGGAAAATCACAGGGTCTACGTAGTTAGAGTTAGTAATGGCGCAACGACGAAGTGTATTCTAAACGTCTACAAATTTGGCATTCTGCTAAACGAGTATTTACGAGCTCACGATTACAATGACGGTGTAATAGTGTTTATCGACTTCAGGAATGTAAACGTCATGGAGTTCGCTAGTAATTTGAATTTAGCGGATCTACGCAATATCATGACAATAGCGATGGAAGGATACGATGTGAGGGTTAAAGGTATACATTTCTTCACTTCATCGAAAACAATTGATGTGATTGTCAATATCATGAAACAGGTTGTTAGTGCCAAACTAGGGAGTCGCATCCACACGCACCTTACTTTAGATAGCCTTTACAAGTACATAACACCGAATGATATATTACCAGCTGAGTATGGCGGGAACGAAGAATCATTGGACGATTTAAGCGATAAATTAATTAACACCTTTACGAATGAAGATAATGTTAAATTCTTTGCTGAGATGGCCGAGGCTGGTGTTCATGAAGCTTTGAGGCCAAAGGATGGGGTGGCCTGTTTCGATGAACAATCTCTTGGTATAGCTGGAAGTTTTAGGACATTAAGTGTAGATTAA

Protein

MARAYLENTIIVNKGSIERAKAQISRLCALKSLLPTFFDGYKSRSDLLETKKYLLQAWLPRMTEENHRVYVVRVSNGATTKCILNVYKFGILLNEYLRAHDYNDGVIVFIDFRNVNVMEFASNLNLADLRNIMTIAMEGYDVRVKGIHFFTSSKTIDVIVNIMKQVVSAKLGSRIHTHLTLDSLYKYITPNDILPAEYGGNEESLDDLSDKLINTFTNEDNVKFFAEMAEAGVHEALRPKDGVACFDEQSLGIAGSFRTLSVD

Uniprot

A0A0S2Z393   A0A2W1BF53   A0A2H1VU69   A0A2A4J6B5   A0A0S2Z354   A0A212FN16   + More
A0A212FN73   A0A194Q0M6   A0A2H4RMR5   A0A0S2Z340   A0A194PZV7   A0A2A4J610   A0A2H4RMR6   A0A194R1M2   A0A2W1BJJ9   A0A2H4RMR8   A0A2H4RMP8   A0A2H4RMR2   A0A194PZV1   A0A0S2Z358   A0A2A4JNW0   A0A194R247   A0A2H4RMS3   A0A2H4RMS9   A0A2H4RMT2   A0A2H4RMU5   A0A2H1UZW6   A0A3S2L7M8   A0A2H4RMT7   A0A2H1W0Z0   A0A3S2LZD4   A0A2A4JNK7   A0A212FN55   A0A2W1BI70   A0A2A4J4G2   A0A2H4RMU0   A0A437BAW6   A0A2H1W264   A0A2H4RMT4   A0A2H1WD56   A0A2W1BCD2   A0A2A4IUI0   A0A2H1W3J3   A0A2W1BML1   A0A2A4IW24   A0A2H1VXT5   A0A2H1V3H4   H9JKR5   A0A1E1WBH5   A0A0S2Z362   H9JKR6   A0A212FN46   A0A2H1VYX3   A0A0S2Z343   A0A2W1BCA0   A0A3S2NSP3   A0A2H1V516   A0A194R1B9   A0A2W1BGX0   A0A3S2PCJ5   A0A3S2NCI1   A0A1E1WFQ9   A0A2A4J2F6   A0A2W1BJA3   A0A2H1WDV2   A0A2A4J0W3   A0A2H1VM17   A0A0S2Z2V1   A0A2H4RMS8   A0A1E1VYT1   A0A2A4JMX0   A0A2W1BGS3   A0A2H4RMP7   A0A1Y1NHE0   D2A5R3   I4DIV6   A0A194Q6G5   A0A232EQE5   A0A194R1R7   A0A0S2Z3C6   I4DMP5   A0A3S2NT85   A0A2H1WHW8   A0A2H4RMS7   A0A2J7Q1W1   A0A2A4JN64   A0A2W1BQL9   A0A2H4RMV1   A0A195ECA1   V5I956  

Pubmed

25684408    28756777    22118469    26354079    29136137    19121390    + More
28004739    18362917    19820115    22651552    28648823   

EMBL

KT943562    ALQ33320.1    KZ150143    PZC72921.1    ODYU01004475    SOQ44379.1    + More
NWSH01003092    PCG66963.1    KT943558    ALQ33316.1    AGBW02007648    OWR55142.1    OWR55140.1    KQ459582    KPI98858.1    MG434624    ATY51930.1    KT943544    ALQ33302.1    KPI98856.1    PCG66964.1    MG434626    ATY51932.1    KQ460878    KPJ11587.1    PZC72920.1    MG434628    ATY51934.1    MG434605    ATY51911.1    MG434625    ATY51931.1    KPI98857.1    KT943545    ALQ33303.1    NWSH01000951    PCG73398.1    KPJ11589.1    MG434627    ATY51933.1    MG434629    ATY51935.1    MG434631    ATY51937.1    MG434650    ATY51956.1    ODYU01000041    SOQ34143.1    RSAL01000100    RVE47537.1    MG434643    ATY51949.1    ODYU01005386    SOQ46174.1    RVE47535.1    PCG73399.1    OWR55139.1    PZC72917.1    PCG66965.1    MG434648    ATY51954.1    RVE47538.1    ODYU01005865    SOQ47185.1    MG434630    ATY51936.1    ODYU01007545    SOQ50404.1    PZC72922.1    NWSH01006612    PCG63329.1    ODYU01006075    SOQ47608.1    PZC72923.1    PCG63330.1    ODYU01005115    SOQ45661.1    ODYU01000500    SOQ35381.1    BABH01011652    GDQN01006712    GDQN01000539    JAT84342.1    JAT90515.1    KT943537    ALQ33295.1    BABH01011650    BABH01011651    OWR55143.1    ODYU01005307    SOQ46031.1    KT943542    ALQ33300.1    PZC72919.1    RVE47536.1    ODYU01000690    SOQ35889.1    KPJ11588.1    PZC72924.1    RVE47533.1    RVE47534.1    GDQN01005214    GDQN01001800    JAT85840.1    JAT89254.1    NWSH01003956    PCG65620.1    PZC72916.1    ODYU01008002    SOQ51248.1    PCG65621.1    ODYU01003303    SOQ41879.1    KT943555    ALQ33313.1    MG434632    ATY51938.1    GDQN01011167    JAT79887.1    PCG73397.1    PZC72915.1    MG434603    ATY51909.1    GEZM01002435    JAV97261.1    KQ971345    EFA05407.1    AK401224    BAM17846.1    KPI98995.1    NNAY01002773    OXU20585.1    KPJ11637.1    KT943552    ALQ33310.1    AK402563    BAM19185.1    RSAL01000093    RVE47935.1    ODYU01008754    SOQ52627.1    MG434633    ATY51939.1    NEVH01019379    PNF22549.1    NWSH01001060    PCG72852.1    KZ150073    PZC74013.1    MG434656    ATY51962.1    KQ979074    KYN22850.1    GALX01003520    JAB64946.1   

Proteomes

UP000218220    UP000007151    UP000053268    UP000053240    UP000283053    UP000005204    + More
UP000007266    UP000215335    UP000235965    UP000078492   

PRIDE

H9JKR5    H9JKR6   

Pfam

PF00650   CRAL_TRIO        + More
PF01359   Transposase_1

Interpro

IPR036273   CRAL/TRIO_N_dom_sf        + More
IPR036865   CRAL-TRIO_dom_sf       
IPR001251   CRAL-TRIO_dom       
IPR001888   Transposase_1       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

A0A0S2Z393   A0A2W1BF53   A0A2H1VU69   A0A2A4J6B5   A0A0S2Z354   A0A212FN16   + More
A0A212FN73   A0A194Q0M6   A0A2H4RMR5   A0A0S2Z340   A0A194PZV7   A0A2A4J610   A0A2H4RMR6   A0A194R1M2   A0A2W1BJJ9   A0A2H4RMR8   A0A2H4RMP8   A0A2H4RMR2   A0A194PZV1   A0A0S2Z358   A0A2A4JNW0   A0A194R247   A0A2H4RMS3   A0A2H4RMS9   A0A2H4RMT2   A0A2H4RMU5   A0A2H1UZW6   A0A3S2L7M8   A0A2H4RMT7   A0A2H1W0Z0   A0A3S2LZD4   A0A2A4JNK7   A0A212FN55   A0A2W1BI70   A0A2A4J4G2   A0A2H4RMU0   A0A437BAW6   A0A2H1W264   A0A2H4RMT4   A0A2H1WD56   A0A2W1BCD2   A0A2A4IUI0   A0A2H1W3J3   A0A2W1BML1   A0A2A4IW24   A0A2H1VXT5   A0A2H1V3H4   H9JKR5   A0A1E1WBH5   A0A0S2Z362   H9JKR6   A0A212FN46   A0A2H1VYX3   A0A0S2Z343   A0A2W1BCA0   A0A3S2NSP3   A0A2H1V516   A0A194R1B9   A0A2W1BGX0   A0A3S2PCJ5   A0A3S2NCI1   A0A1E1WFQ9   A0A2A4J2F6   A0A2W1BJA3   A0A2H1WDV2   A0A2A4J0W3   A0A2H1VM17   A0A0S2Z2V1   A0A2H4RMS8   A0A1E1VYT1   A0A2A4JMX0   A0A2W1BGS3   A0A2H4RMP7   A0A1Y1NHE0   D2A5R3   I4DIV6   A0A194Q6G5   A0A232EQE5   A0A194R1R7   A0A0S2Z3C6   I4DMP5   A0A3S2NT85   A0A2H1WHW8   A0A2H4RMS7   A0A2J7Q1W1   A0A2A4JN64   A0A2W1BQL9   A0A2H4RMV1   A0A195ECA1   V5I956  

PDB

1R5L     E-value=1.08636e-05,     Score=115

KEGG

101744328    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0005215   GO:0005622   GO:0006810   GO:0008449   GO:0030203   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

Length:

263

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.09177

Exp number, first 60 AAs:

0.00274

Total prob of N-in:

0.08381

outside

1  -  263

 

 

Pi

302.355235

Theta

174.867844

Tajima's D

3.124302

CLR

0.29098

CSRT

0.984250787460627

Interpretation

Uncertain