Gene

KWMTBOMO09704

Pre Gene Modal

BGIBMGA012887

Annotation

PREDICTED:_alpha-tocopherol_transfer_protein-like_[Amyelois_transitella]

Location

Bomo_Chr16(+):7678223-7689212      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.74 Nuclear   Reliability : 2.091

CDS

ATGCCTTCCGTACAAGAGCAGCATCCCTTACTGATTTGCACTGAAGAGGACAAAGAAGAAATAAAAAGGCTACTAGAAATCAAAGATGCAAGACTACACGAAGACATTGAAGCGATCTTGGACTGGTTCAACAAGCAGCCCCATTTAGTCGAAGCTGGCATCGACCGTGATATTGTCGAGAGGATGCTGATCATATCAAAAGGCTCAATCGAGAAGACCAAACATAGAATCGACAATTTCTACAAGTACAGAGCTTTGGCGCCCGAGCTTATTCAGAACAGGGAAAATGTTCTTTCAGATCCAAGCGATCTGTGGTCTGTTTACACCCAAATCTCGATACCCAGAATGTACAATGGAAGCAGAATATCGGTGTTCGCAGTTCACGATCCGGACCCTAGCAATTTCTCTTCTGAAGCGCTGTTTAGAAACACATTTATGCTGGTCGATCTACGTTTGAAGTATGACTATTTCCTGAACGACATATGGTTGTTGGACATGAAAAACACAAGTTTTAGTCATGTACTCCGTTTGAACCCGGTTGTGTTGCAAAAGACCGCTCAAATATTCCACGATGGTACGGGATTACGAGTAAGCGCCATTCACGTTATAAACGCGACGAACGTATTCCAACATTTAGTTAGCTTCATGAAACAATTCTTCAATCCAAAATTAATGGAAAGGCTACACGTCCACGATAGCTTAGAAGAATTACATAAATATATTCCCAAGAAGTATCTACCCAAAGACTACGGCGGCGAGGAAATTTCTCTTTCAGAATTCAGAAACATATACGAGAAGGAAATAAGAAGCACAAATACCAAGCGTGTCGTGATAGAAGCCAGTAAAATGATTTCCAATGAAAACAGACGACCGGCATCAAACATAAATGAAGATTACCTGGCGGGTTCGTTTAGGAAATTGGATTTCGATTAA

Protein

MPSVQEQHPLLICTEEDKEEIKRLLEIKDARLHEDIEAILDWFNKQPHLVEAGIDRDIVERMLIISKGSIEKTKHRIDNFYKYRALAPELIQNRENVLSDPSDLWSVYTQISIPRMYNGSRISVFAVHDPDPSNFSSEALFRNTFMLVDLRLKYDYFLNDIWLLDMKNTSFSHVLRLNPVVLQKTAQIFHDGTGLRVSAIHVINATNVFQHLVSFMKQFFNPKLMERLHVHDSLEELHKYIPKKYLPKDYGGEEISLSEFRNIYEKEIRSTNTKRVVIEASKMISNENRRPASNINEDYLAGSFRKLDFD

Uniprot

H9JTM5   A0A2W1BGT2   A0A2H1VQN7   A0A3S2NHA5   A0A2H1WDB5   A0A212FN21   + More
I4DNG2   A0A194Q1J1   A0A2H4RMS4   A0A194R6U8   A0A2A4JMX0   A0A2W1BGS3   A0A0S2Z2V1   A0A1E1VYT1   A0A194Q621   A0A194R2X0   A0A2H1WHW8   A0A2H4RMV1   A0A2H4RMS8   A0A2H4RMP7   A0A2H4RMS7   A0A0N7EI05   A0A212FN46   A0A2A4J2F6   A0A2A4J4G2   V5I956   D6X3G0   A0A1Y1MVW2   A0A2A4J0W3   A0A067R7W2   A0A2H1VM17   A0A3S2PCJ5   A0A2J7Q1U6   W5JX38   V5G488   A0A067RGV3   D7EIP5   A0A182IQP8   Q16ZA0   A0A1Q3G2T7   A0A0S2Z393   A0A2W1BJJ9   A0A067RJF7   A0A2W1BGX0   A0A2J7Q1W1   A0A084WB40   A0A0S2Z362   A0A194R1B4   A0A194PZV1   A0A2J7Q1U4   A0A232EQE5   A0A444TQC1   A0A182QP18   A0A0J9R8Z1   A0A2J7Q1T9   A0A2H1UZW6   Q5TMY7   A0A084WB39   A0A182PGB9   A0A0S2Z343   A0A2A4J610   A0A1B6IGF9   A0A182UHL4   A0A182KD53   A0A1I8N7T4   B4HT21   A0A1I8NMU1   I4DN93   A0A182YQ85   A0A182WD92   A0A182LZL5   A0A2M4CYG7   A0A182UMQ1   A0A453Z126   A0A182KT08   A0A1S3D7C8   A0A3Q0J1Z7   A0A1B6GGG4   A0A182MLC5   A0A182MXC3   A0A182U0Q4   A0A0A1WLH5   A0A067R9Z3   A0A453Z130   A0A182KT05   A0A2H4RMT7   A0A1S4FJA2   A0A2J7Q1T7   A0A444TT87   B4QHB7   A0A2H4RMR8   Q16ZA3   A0A182M982   A0A2J7Q750   A0A182JUT9   A0A2H1W264   A0A1I8M1T5  

Pubmed

19121390    28756777    22118469    22651552    26354079    29136137    + More
25684408    26371082    18362917    19820115    28004739    24845553    20920257    23761445    17510324    24438588    28648823    22936249    12364791    25315136    17994087    25244985    20966253    25830018   

EMBL

BABH01003529    KZ150143    PZC72925.1    ODYU01003866    SOQ43163.1    RSAL01000100    + More
RVE47540.1    ODYU01007894    SOQ51075.1    AGBW02007648    OWR55141.1    AK402893    BAM19452.1    KQ459582    KPI98859.1    MG434622    ATY51928.1    KQ460878    KPJ11586.1    NWSH01000951    PCG73397.1    PZC72915.1    KT943555    ALQ33313.1    GDQN01011167    JAT79887.1    KPI98855.1    KPJ11590.1    ODYU01008754    SOQ52627.1    MG434656    ATY51962.1    MG434632    ATY51938.1    MG434603    ATY51909.1    MG434633    ATY51939.1    KT781079    MG434657    ALF12134.1    ATY51963.1    OWR55143.1    NWSH01003956    PCG65620.1    NWSH01003092    PCG66965.1    GALX01003520    JAB64946.1    KQ971374    EEZ97415.1    GEZM01023906    GEZM01023905    GEZM01023904    GEZM01023902    GEZM01023901    JAV88146.1    PCG65621.1    KK852648    KDR19510.1    ODYU01003303    SOQ41879.1    RVE47533.1    NEVH01019379    PNF22556.1    ADMH02000039    ETN68020.1    GALX01003616    JAB64850.1    KDR19513.1    KQ971409    EFA12203.2    CH477495    EAT39960.1    GFDL01000931    JAV34114.1    KT943562    ALQ33320.1    PZC72920.1    KDR19512.1    PZC72924.1    PNF22549.1    ATLV01022312    KE525331    KFB47434.1    KT943537    ALQ33295.1    KPJ11583.1    KPI98857.1    PNF22550.1    NNAY01002773    OXU20585.1    SAUD01001073    RXG72188.1    AXCN02001683    CM002911    KMY92548.1    PNF22555.1    ODYU01000041    SOQ34143.1    AAAB01008986    EAA43295.4    KFB47433.1    KT943542    ALQ33300.1    PCG66964.1    GECU01021702    JAS86004.1    CH480816    EDW47131.1    AK402781    BAM19383.1    AXCM01009708    GGFL01006202    MBW70380.1    GECZ01008258    JAS61511.1    AXCM01009709    GBXI01014408    JAC99883.1    KDR19511.1    MG434643    ATY51949.1    PNF22547.1    SAUD01000481    RXG73198.1    CM000362    EDX06371.1    MG434628    ATY51934.1    EAT39957.1    AXCM01007540    NEVH01017447    PNF24412.1    ODYU01005865    SOQ47185.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000053240    UP000218220    + More
UP000007266    UP000027135    UP000235965    UP000000673    UP000075880    UP000008820    UP000030765    UP000215335    UP000288706    UP000075886    UP000007062    UP000075885    UP000075902    UP000075881    UP000095301    UP000001292    UP000095300    UP000076408    UP000075920    UP000075883    UP000075903    UP000075882    UP000079169    UP000075884    UP000000304   

PRIDE

H9JTM5   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR036865   CRAL-TRIO_dom_sf        + More
IPR036273   CRAL/TRIO_N_dom_sf       
IPR001251   CRAL-TRIO_dom       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF46938   SSF46938        + More
SSF52087   SSF52087       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9JTM5   A0A2W1BGT2   A0A2H1VQN7   A0A3S2NHA5   A0A2H1WDB5   A0A212FN21   + More
I4DNG2   A0A194Q1J1   A0A2H4RMS4   A0A194R6U8   A0A2A4JMX0   A0A2W1BGS3   A0A0S2Z2V1   A0A1E1VYT1   A0A194Q621   A0A194R2X0   A0A2H1WHW8   A0A2H4RMV1   A0A2H4RMS8   A0A2H4RMP7   A0A2H4RMS7   A0A0N7EI05   A0A212FN46   A0A2A4J2F6   A0A2A4J4G2   V5I956   D6X3G0   A0A1Y1MVW2   A0A2A4J0W3   A0A067R7W2   A0A2H1VM17   A0A3S2PCJ5   A0A2J7Q1U6   W5JX38   V5G488   A0A067RGV3   D7EIP5   A0A182IQP8   Q16ZA0   A0A1Q3G2T7   A0A0S2Z393   A0A2W1BJJ9   A0A067RJF7   A0A2W1BGX0   A0A2J7Q1W1   A0A084WB40   A0A0S2Z362   A0A194R1B4   A0A194PZV1   A0A2J7Q1U4   A0A232EQE5   A0A444TQC1   A0A182QP18   A0A0J9R8Z1   A0A2J7Q1T9   A0A2H1UZW6   Q5TMY7   A0A084WB39   A0A182PGB9   A0A0S2Z343   A0A2A4J610   A0A1B6IGF9   A0A182UHL4   A0A182KD53   A0A1I8N7T4   B4HT21   A0A1I8NMU1   I4DN93   A0A182YQ85   A0A182WD92   A0A182LZL5   A0A2M4CYG7   A0A182UMQ1   A0A453Z126   A0A182KT08   A0A1S3D7C8   A0A3Q0J1Z7   A0A1B6GGG4   A0A182MLC5   A0A182MXC3   A0A182U0Q4   A0A0A1WLH5   A0A067R9Z3   A0A453Z130   A0A182KT05   A0A2H4RMT7   A0A1S4FJA2   A0A2J7Q1T7   A0A444TT87   B4QHB7   A0A2H4RMR8   Q16ZA3   A0A182M982   A0A2J7Q750   A0A182JUT9   A0A2H1W264   A0A1I8M1T5  

PDB

1OIZ     E-value=6.0695e-15,     Score=196

KEGG

101744855    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0005215   GO:0005622   GO:0006810   GO:0008449   GO:0030203   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

Length:

310

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0578

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00905

outside

1  -  310

 

 

Pi

320.721142

Theta

170.731869

Tajima's D

2.989866

CLR

0.240707

CSRT

0.980150992450378

Interpretation

Uncertain