Gene

KWMTBOMO09697

Pre Gene Modal

BGIBMGA012883

Annotation

PREDICTED:_alpha-tocopherol_transfer_protein-like_[Bombyx_mori]

Location

Bomo_Chr16(+):7492077-7502686      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.3

CDS

ATGGAGAAGTTACCTTACCACCCCCTGGTAATAGTGACGCAAGAGGACTTGCAGAAAGCACGAGAACTGTACGGGGTTCAAGATGTCAATTCACTGAGAGAAAGTTTAGACATTTTAGAAAAATGGCTTCAAAAACAACCACATCTCGCTGAAGGAAGCAAATATTTGAGTCCAGCAAACTTGGAACGTGCTTTTATAACAGCAAAAGGTTCAGTAGAAGAAACTAAAAGGAGACTCGAGAGGATGTTTACATCTCGCGGTATGATGCCCGAATTGTGTTTGAATAGAACCGTTGAAGAATTCAAAGACGAATGGGAGGTTGTAAACTACGTGCCCCTTCCAAAGATATGTCCAAGCGACCGTTCGAGAGTTATGGTAACGCAATTCCTAACAGAGAAACTAGAAAAGTTCAGCATATTAGCATACTTCAGACTTTGCTTCATGGTGGGCGAATACAGACTGAATTTTGATTACACTCCAGCGGAGAGATTTATAATTGATTTTAAAAATATACACATCGGTCTATTGATTAAAATCAATCCTGTAGTAGTTAAGAAAGCTGAAGTACTGTGCACTGAAGGAATAGGCACAAAGATAAAGGGTATACACATTCTGAACGCACCAACGTTCGTGGACAAAATCATACATTTACTAAAGCAGGCGCTCAGAGAAAAACTCGCAAATAGGATCCATGTTCATAGCACCTATGAAGATCTCCACAAATATATACCAAAGGAAATATTGCCTAAAGACTATGGCGGTGATGAAGAATCATGCTCTAAATTGAGTGAAAAATGGAAAAAGCTTCTCAGGCAAGAGGAAGCACGAAAAATTATACAGGACACCGAAAAACTAGTCAGCGATGAAACAAAGAGGCATGAATCTAAATTTAATGAAGAATATATGGGGATGCCTGGGTCTTTCAGACGTTTAGCTGTCGATTGA

Protein

MEKLPYHPLVIVTQEDLQKARELYGVQDVNSLRESLDILEKWLQKQPHLAEGSKYLSPANLERAFITAKGSVEETKRRLERMFTSRGMMPELCLNRTVEEFKDEWEVVNYVPLPKICPSDRSRVMVTQFLTEKLEKFSILAYFRLCFMVGEYRLNFDYTPAERFIIDFKNIHIGLLIKINPVVVKKAEVLCTEGIGTKIKGIHILNAPTFVDKIIHLLKQALREKLANRIHVHSTYEDLHKYIPKEILPKDYGGDEESCSKLSEKWKKLLRQEEARKIIQDTEKLVSDETKRHESKFNEEYMGMPGSFRRLAVD

Uniprot

A0A0S2Z2V1   A0A2H1WHW8   A0A2W1BGS3   A0A2A4JMX0   A0A1E1VYT1   A0A194R2X0   + More
A0A194Q621   A0A2H4RMS8   A0A212FN46   A0A2H4RMV1   A0A0N7EI05   A0A2H4RMP7   A0A3S2PCJ5   A0A2H4RMS7   A0A212FN73   A0A2W1BGX0   A0A2A4J0W3   A0A2W1BF53   A0A2A4J4G2   A0A2A4J2F6   A0A0S2Z362   H9JTM5   A0A2W1BGT2   A0A2H1W264   A0A2H1VQN7   A0A3S2NHA5   A0A437BAW6   A0A2H4RMT7   A0A0S2Z393   A0A2H1VM17   A0A2A4J6B5   I4DNG2   A0A194Q1J1   A0A2W1BJJ9   A0A194R1M2   A0A2H1WD56   A0A194R6U8   A0A2A4IUI0   A0A194Q0M6   A0A2H4RMP8   A0A2H1UZW6   A0A2A4J610   A0A2W1BCD2   A0A0S2Z340   A0A2H1WDB5   A0A194PZV1   A0A2J7Q1W1   A0A2H4RMT4   A0A2H1WDV2   A0A2H1VU69   A0A0S2Z343   A0A2H4RMT2   A0A067R9Z3   A0A0S2Z358   A0A212FN21   A0A067RJF7   A0A194PZV7   A0A2H1V3H4   A0A232EQE5   A0A212FN55   A0A2J7Q1U6   A0A3S2L7M8   A0A067R7W2   A0A2A4JNW0   A0A023F5G9   D2A5R3   A0A2A4IW24   H9JKR5   A0A2W1BI70   A0A2W1BML1   A0A2J7Q1U4   A0A2J7Q1T9   A0A067RGV3   I4DN93   A0A2R7WAD2   A0A2H1VXT5   A0A194R247   H9JKR6   A0A2A4JNK7   A0A2H1W0Z0   A0A2H4RMR8   A0A2J7Q1T0   A0A2H4RMS4   V5I956   A0A194R1B4   A0A2J7Q755   A0A2H4RMS3   A0A2H4RMU0   A0A2H4RMR5   A0A2J7Q1T7   A0A182G0T6   A0A212FN16   A0A2S2R1Y2  

Pubmed

25684408    28756777    26354079    29136137    22118469    26371082    + More
19121390    22651552    24845553    28648823    25474469    18362917    19820115    26483478   

EMBL

KT943555    ALQ33313.1    ODYU01008754    SOQ52627.1    KZ150143    PZC72915.1    + More
NWSH01000951    PCG73397.1    GDQN01011167    JAT79887.1    KQ460878    KPJ11590.1    KQ459582    KPI98855.1    MG434632    ATY51938.1    AGBW02007648    OWR55143.1    MG434656    ATY51962.1    KT781079    MG434657    ALF12134.1    ATY51963.1    MG434603    ATY51909.1    RSAL01000100    RVE47533.1    MG434633    ATY51939.1    OWR55140.1    PZC72924.1    NWSH01003956    PCG65621.1    PZC72921.1    NWSH01003092    PCG66965.1    PCG65620.1    KT943537    ALQ33295.1    BABH01003529    PZC72925.1    ODYU01005865    SOQ47185.1    ODYU01003866    SOQ43163.1    RVE47540.1    RVE47538.1    MG434643    ATY51949.1    KT943562    ALQ33320.1    ODYU01003303    SOQ41879.1    PCG66963.1    AK402893    BAM19452.1    KPI98859.1    PZC72920.1    KPJ11587.1    ODYU01007545    SOQ50404.1    KPJ11586.1    NWSH01006612    PCG63329.1    KPI98858.1    MG434605    ATY51911.1    ODYU01000041    SOQ34143.1    PCG66964.1    PZC72922.1    KT943544    ALQ33302.1    ODYU01007894    SOQ51075.1    KPI98857.1    NEVH01019379    PNF22549.1    MG434630    ATY51936.1    ODYU01008002    SOQ51248.1    ODYU01004475    SOQ44379.1    KT943542    ALQ33300.1    MG434631    ATY51937.1    KK852648    KDR19511.1    KT943545    ALQ33303.1    OWR55141.1    KDR19512.1    KPI98856.1    ODYU01000500    SOQ35381.1    NNAY01002773    OXU20585.1    OWR55139.1    PNF22556.1    RVE47537.1    KDR19510.1    PCG73398.1    GBBI01002319    JAC16393.1    KQ971345    EFA05407.1    PCG63330.1    BABH01011652    PZC72917.1    PZC72923.1    PNF22550.1    PNF22555.1    KDR19513.1    AK402781    BAM19383.1    KK854375    PTY15215.1    ODYU01005115    SOQ45661.1    KPJ11589.1    BABH01011650    BABH01011651    PCG73399.1    ODYU01005386    SOQ46174.1    MG434628    ATY51934.1    PNF22548.1    MG434622    ATY51928.1    GALX01003520    JAB64946.1    KPJ11583.1    NEVH01017447    PNF24414.1    MG434627    ATY51933.1    MG434648    ATY51954.1    MG434624    ATY51930.1    PNF22547.1    JXUM01037643    KQ561136    KXJ79606.1    OWR55142.1    GGMS01014782    MBY83985.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000283053    UP000005204    + More
UP000235965    UP000027135    UP000215335    UP000007266    UP000069940    UP000249989   

PRIDE

H9JTM5    H9JKR5    H9JKR6   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR001251   CRAL-TRIO_dom        + More
IPR036865   CRAL-TRIO_dom_sf       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

A0A0S2Z2V1   A0A2H1WHW8   A0A2W1BGS3   A0A2A4JMX0   A0A1E1VYT1   A0A194R2X0   + More
A0A194Q621   A0A2H4RMS8   A0A212FN46   A0A2H4RMV1   A0A0N7EI05   A0A2H4RMP7   A0A3S2PCJ5   A0A2H4RMS7   A0A212FN73   A0A2W1BGX0   A0A2A4J0W3   A0A2W1BF53   A0A2A4J4G2   A0A2A4J2F6   A0A0S2Z362   H9JTM5   A0A2W1BGT2   A0A2H1W264   A0A2H1VQN7   A0A3S2NHA5   A0A437BAW6   A0A2H4RMT7   A0A0S2Z393   A0A2H1VM17   A0A2A4J6B5   I4DNG2   A0A194Q1J1   A0A2W1BJJ9   A0A194R1M2   A0A2H1WD56   A0A194R6U8   A0A2A4IUI0   A0A194Q0M6   A0A2H4RMP8   A0A2H1UZW6   A0A2A4J610   A0A2W1BCD2   A0A0S2Z340   A0A2H1WDB5   A0A194PZV1   A0A2J7Q1W1   A0A2H4RMT4   A0A2H1WDV2   A0A2H1VU69   A0A0S2Z343   A0A2H4RMT2   A0A067R9Z3   A0A0S2Z358   A0A212FN21   A0A067RJF7   A0A194PZV7   A0A2H1V3H4   A0A232EQE5   A0A212FN55   A0A2J7Q1U6   A0A3S2L7M8   A0A067R7W2   A0A2A4JNW0   A0A023F5G9   D2A5R3   A0A2A4IW24   H9JKR5   A0A2W1BI70   A0A2W1BML1   A0A2J7Q1U4   A0A2J7Q1T9   A0A067RGV3   I4DN93   A0A2R7WAD2   A0A2H1VXT5   A0A194R247   H9JKR6   A0A2A4JNK7   A0A2H1W0Z0   A0A2H4RMR8   A0A2J7Q1T0   A0A2H4RMS4   V5I956   A0A194R1B4   A0A2J7Q755   A0A2H4RMS3   A0A2H4RMU0   A0A2H4RMR5   A0A2J7Q1T7   A0A182G0T6   A0A212FN16   A0A2S2R1Y2  

PDB

3W68     E-value=8.722e-12,     Score=168

KEGG

101737327    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0005215   GO:0005622   GO:0006810   GO:0008449   GO:0030203   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

Length:

314

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01159

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00578

outside

1  -  314

 

 

Pi

314.496073

Theta

175.613459

Tajima's D

2.566499

CLR

0.015239

CSRT

0.952302384880756

Interpretation

Uncertain