Gene

KWMTBOMO09695

Pre Gene Modal

BGIBMGA012882

Annotation

PREDICTED:_TWiK_family_of_potassium_channels_protein_9-like_[Bombyx_mori]

Location

Bomo_Chr16(+):7421827-7432786      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.579

CDS

ATGGATATAGATCATGTGGTGCTGGATAAAGAAGCAATCAATCGTTTCGAACAGTATACGTTGGCAAAGCCATCGCTAAACGGGGGGATCCCTTTGGACAGATGCCAAGACGCCGACTCCATGCTCTCTAATAGCAGGAAGAGAGCACAAATATCACGCCAAAAAGTTGTTTGCTGCTTTTGTTTCAAAACTACGAAATACAGGAGAAAACAATTCATTATAGGATCGCTTACAAATGTCGTTATATTCGCTATTTTGTTGGCGTATACTTTCCTCGGCTCTTTTGTATTCTTAGCTATAGAGGGAGGTGTGGAAATACCGGTCAGACCTCGCCTGTTACCGGACAGACAAAAAATAAACAACAAAAGCGAGAATGCCACAAGAAAGAAATACCCGGACGACGATTACGACTACGGTAACTTGACATTATCAGCGAATTATTTCTGGGACGCGAGAAGCAGAGCAGTCGAAAACATTTGGGAGATAACCGTCTCACTAAATATATTGTACAGAGAGAATTGGACGCGGTTGGCTGCACAGGAGATACTGAAATTTCAAAACGAGCTGGTGCAGAGGGTGACTACTGAAATGGCGTCACAATATGGCGTTAGTTACAGAGAAATGGCTCTTGGAGAATTTGGCGGGAACGAAGCCAGTAACCATTATGAGGAGCATGAGTGGAATTTAGCCTTAGCATTTTTCTACTCGCTCACTGTTTTGACTACTATAGGCTATGGAAATATTGCTCCACGAACGATACTTGGCAAAGGAGTTACAATTTTATACGCTTTAATCGGGATACCACTAACATTGGTCTACTTATCCAGTGTGGGATCTCTACTATCTAAAATGGCTAGAAGTGTCTTCAGTAAAGCCCTTTGCTGTTGCCTTTGTTCTAAATGTGGCTACTGCTGTTATGATGAGAGGAGAATGGCGGAGAAGGAAAGACGCATGAAACTTAAGAGGCAGCAAGAGGAGATGCTCAACAGTCAAAACACCAGCAAAACGCCCACTGAAGAGTGCTACGTTTTAAAGCCAGACAGTCAGAAAGACTCGTCTCTATCAGAAAGGCCGACGACGAGCACTGCCAAAGATGATATCATAAGTTGGCCTGACACAGATTCGAAGCTATCTATGCACGGTTTAAGTATATTAGCCCCAGTTTTCCTGTGTCTCGTCGCCATATTCATTTACATAGTCGCAGGGGCCGTTGTTCTTTTTAAATTGGACGATTTAAGTATTATCGACGGTTTTTATTTTTGTTTCATGGCATTAAGTACGATTGGCTTTGGTAACATCGTTCCCGGGATGAGCTACACGACAATCCACGGAGTTAGATACTATACGATTAATTCGACAACGCTTTGGTTTTGTTCGGCCTATACACTGACCGGTCTCGCTTTGACCGCGATGTGTTTCGGTGTTATCCACGACGAGATAATATATAGAATTAAGCACCAGCAAAAGGAATGGTCTCAGAAGGGAAACACTGTTAATGATGAGAGCAAATCGGAGAACTTGTACAGTATAATGGAGGATAGCTCCGTAGAACGTAGTAGAATCGAAATCGACAATAGGGAGGTAGTTATTAGTGTAGATGATGTGTCAGGAGCAATGGATTCGAGTGCCGAGTTCCCCCCACCACCCCCCGAAGAAGAAATTATAGCTATTGTAACGAAAAAAGAACCTAAAGGTTTCGGCAATATGGTTGCATATAACGCTCTACCAGAAATGCTCGAGCATGTGAACACGTAA

Protein

MDIDHVVLDKEAINRFEQYTLAKPSLNGGIPLDRCQDADSMLSNSRKRAQISRQKVVCCFCFKTTKYRRKQFIIGSLTNVVIFAILLAYTFLGSFVFLAIEGGVEIPVRPRLLPDRQKINNKSENATRKKYPDDDYDYGNLTLSANYFWDARSRAVENIWEITVSLNILYRENWTRLAAQEILKFQNELVQRVTTEMASQYGVSYREMALGEFGGNEASNHYEEHEWNLALAFFYSLTVLTTIGYGNIAPRTILGKGVTILYALIGIPLTLVYLSSVGSLLSKMARSVFSKALCCCLCSKCGYCCYDERRMAEKERRMKLKRQQEEMLNSQNTSKTPTEECYVLKPDSQKDSSLSERPTTSTAKDDIISWPDTDSKLSMHGLSILAPVFLCLVAIFIYIVAGAVVLFKLDDLSIIDGFYFCFMALSTIGFGNIVPGMSYTTIHGVRYYTINSTTLWFCSAYTLTGLALTAMCFGVIHDEIIYRIKHQQKEWSQKGNTVNDESKSENLYSIMEDSSVERSRIEIDNREVVISVDDVSGAMDSSAEFPPPPPEEEIIAIVTKKEPKGFGNMVAYNALPEMLEHVNT

Similarity

Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.

Uniprot

H9JTM0   A0A3S2LIQ5   A0A0L7L7U6   A0A2H1X3T4   A0A2A4JM27   A0A2W1BAR8   + More
A0A194Q1I5   A0A194R1M7   A0A212FN32   A0A194R6U4   H9JTT7   A0A0L7KMZ7   A0A3S2NY61   A0A194Q0N1   A0A212FN26   A0A2W1BHB4   A0A2H1VRM0   D2A6I4   A0A1J1ID08   A0A182MLI1   A0A182W079   A0A182N624   A0A182RNP6   A0A1S4HDT8   A0A182LFS8   A0A182Y4C5   A0A182PAA6   W5JF99   A0A3L8DE05   A0A182F7F2   A0A154PFT0   A0A182U5S3   A0A158NJU8   A0A182K1R4   B4M3H8   B4L462   A0A3B0K933   A0A2H8TI30   A0A2S2NWI9   J9JQB1   A0A2R7WRI0   A0A182GEM1   A0A182FLS6  

Pubmed

19121390    26227816    28756777    26354079    22118469    18362917    + More
19820115    12364791    20966253    25244985    20920257    23761445    30249741    21347285    17994087    26483478   

EMBL

BABH01003557    RSAL01000100    RVE47532.1    JTDY01002366    KOB71567.1    ODYU01013224    + More
SOQ59918.1    NWSH01001064    PCG72836.1    KZ150267    PZC71701.1    KQ459582    KPI98854.1    KQ460878    KPJ11592.1    AGBW02007648    OWR55145.1    KPJ11581.1    BABH01003515    JTDY01008277    KOB64648.1    RVE47542.1    KPI98863.1    OWR55137.1    KZ150128    PZC73084.1    ODYU01004008    SOQ43447.1    KQ971348    EFA04915.1    CVRI01000047    CRK98167.1    AXCM01001083    AAAB01008859    ADMH02001371    ETN62761.1    QOIP01000009    RLU18665.1    KQ434893    KZC10672.1    ADTU01001990    ADTU01001991    ADTU01001992    ADTU01001993    ADTU01001994    ADTU01001995    CH940651    EDW65353.2    CH933810    EDW07340.2    OUUW01000036    SPP89863.1    GFXV01001982    MBW13787.1    GGMR01008467    MBY21086.1    ABLF02035901    ABLF02035904    ABLF02035907    ABLF02035909    ABLF02035910    KK855358    PTY22164.1    JXUM01058168    JXUM01058169    JXUM01058170    JXUM01058171    JXUM01058172    JXUM01058173    KQ561990    KXJ76972.1   

Proteomes

UP000005204    UP000283053    UP000037510    UP000218220    UP000053268    UP000053240    + More
UP000007151    UP000007266    UP000183832    UP000075883    UP000075920    UP000075884    UP000075900    UP000075882    UP000076408    UP000075885    UP000000673    UP000279307    UP000069272    UP000076502    UP000075902    UP000005205    UP000075881    UP000008792    UP000009192    UP000268350    UP000007819    UP000069940    UP000249989   

PRIDE

H9JTM0    H9JTT7   

Pfam

PF07885   Ion_trans_2

Interpro

IPR003280   2pore_dom_K_chnl        + More
IPR013099   K_chnl_dom       

ProteinModelPortal

H9JTM0   A0A3S2LIQ5   A0A0L7L7U6   A0A2H1X3T4   A0A2A4JM27   A0A2W1BAR8   + More
A0A194Q1I5   A0A194R1M7   A0A212FN32   A0A194R6U4   H9JTT7   A0A0L7KMZ7   A0A3S2NY61   A0A194Q0N1   A0A212FN26   A0A2W1BHB4   A0A2H1VRM0   D2A6I4   A0A1J1ID08   A0A182MLI1   A0A182W079   A0A182N624   A0A182RNP6   A0A1S4HDT8   A0A182LFS8   A0A182Y4C5   A0A182PAA6   W5JF99   A0A3L8DE05   A0A182F7F2   A0A154PFT0   A0A182U5S3   A0A158NJU8   A0A182K1R4   B4M3H8   B4L462   A0A3B0K933   A0A2H8TI30   A0A2S2NWI9   J9JQB1   A0A2R7WRI0   A0A182GEM1   A0A182FLS6  

PDB

4XDL     E-value=1.03779e-08,     Score=145

KEGG

105842037    no KO assigned | (RefSeq) TWiK family of potassium channels protein 9-like

GO

GO:0016021   GO:0005267   GO:0006811   GO:0022841   GO:0071805   GO:0005887   GO:0030322   GO:0016020   GO:0051259   GO:0008449   GO:0030203   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

Length:

584

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

134.65872

Exp number, first 60 AAs:

0.00028

Total prob of N-in:

0.73254

outside

1  -  76

TMhelix

77  -  99

inside

100  -  226

TMhelix

227  -  249

outside

250  -  258

TMhelix

259  -  281

inside

282  -  384

TMhelix

385  -  407

outside

408  -  411

TMhelix

412  -  434

inside

435  -  454

TMhelix

455  -  477

outside

478  -  584

 

 

Pi

265.708581

Theta

180.716881

Tajima's D

1.958153

CLR

0.198356

CSRT

0.874106294685266

Interpretation

Uncertain