SGID The Silkworm Genome Information Database
Gene
KWMTBOMO09690
Annotation
PREDICTED:_trypsin?_alkaline_C-like_[Amyelois_transitella]
Full name
Trypsin, alkaline A       + More
Trypsin CFT-1      
Trypsin, alkaline C      
Location in the cell
Extracellular   Reliability : 2.623
 

Sequence

CDS
ATGTTTTTTAAATGTTTAAATTCTGTAGTTGCGGTTTTTTTAACTTTTGAAATTTGTCAAGTAAATACACAGTATCAACTGCGAGTGATCGAAGGAAAGCCCACCTCTATAGACAGATACCCGATAGTTGCACAGCTGTTGCTAGATACGTGGGGCGACAGAAACTTTATACAGCACTGTGCAGGTGTTATCCTAACATCTAGGCATGTCGTATCCACTGCACACTGTTTTCAATACAACGAAAGTACCGGAAGAAACTACAGTCTACCTAAATACTGGAGGGTTCGCGTAGGTTCCTCTTACAGGTCCCGAGGAGGTTTCATCCATGGGTTGAAAACAATCATAACTCATCGCGGCTTCGATCAGCTTTATTACACCAATGATATCGCAATGGTCGTTGTGACTAAAACATTTATATTTAGTCCAAAAGTAAGACAAGGAACTATTGTGAAGTATGGAACCGAAATAAGTCCGAATTCTATTTGTACCCTTATCGGATGGGGAGTTAAAGAGCCTGACGGAGCTCAACCGGAACAATTGCAAAGCACAGCACTATTTACAATAGATCAAGATGTGTGTAGAAATCGTTACGCCACAATCCGGGCACTGATTTCTGATTCAATGTTATGTGCTGGACGCGTTGAAGCTGGCGGTCCTGATGGTTGCTATGGAGACTCTGGTGGGCCAATAATATACAAAGGCCTTGTAGTAGGCCTCGTATCTTTCGGTTACTCTTGCGGTCATCGATACTACCCTGGTGTCTACACTAAAATCTCTCATTATACAGATTGGATAGTAAAAACAGTTTTGACTAATAAATAA
Protein
MFFKCLNSVVAVFLTFEICQVNTQYQLRVIEGKPTSIDRYPIVAQLLLDTWGDRNFIQHCAGVILTSRHVVSTAHCFQYNESTGRNYSLPKYWRVRVGSSYRSRGGFIHGLKTIITHRGFDQLYYTNDIAMVVVTKTFIFSPKVRQGTIVKYGTEISPNSICTLIGWGVKEPDGAQPEQLQSTALFTIDQDVCRNRYATIRALISDSMLCAGRVEAGGPDGCYGDSGGPIIYKGLVVGLVSFGYSCGHRYYPGVYTKISHYTDWIVKTVLTNK

Summary

Catalytic Activity
Preferential cleavage: Arg-|-Xaa, Lys-|-Xaa.
Similarity
Belongs to the peptidase S1 family.
Keywords
Disulfide bond   Hydrolase   Protease   Secreted   Serine protease   Signal   Zymogen   Direct protein sequencing  
Feature
propeptide  Activation peptide
chain  Trypsin, alkaline A
EC Number
3.4.21.4
EMBL
ODYU01002820    SOQ40778.1    KQ459582    KPI98851.1    KQ460878    KPJ11594.1    + More
AGBW02007649    OWR55124.1    NWSH01002011    PCG69442.1    RSAL01000115    RVE46900.1    JTDY01003417    KOB69586.1    RSAL01000038    RVE51123.1    KQ459597    KPI95066.1    KPI95074.1    KPI95070.1    AGBW02007905    OWR54439.1    KR024672    ALE15214.1    KPI95071.1    JN033751    JN315765    AEW46904.1    AFK64829.1    NWSH01000106    PCG79484.1    KPI95067.1    KQ460226    KPJ16474.1    RVE51121.1    KPI95068.1    KZ149992    PZC75528.1    EF531631    EF531633    ABR88242.1    ABR88244.1    PCG79485.1    PZC75529.1    PCG79488.1    JX866720    AGB93875.1    JX195651    AFQ37934.1    JN315762    AFK64826.1    JN793539    AFO68319.1    KPJ16473.1    JTDY01001906    KOB72570.1    EF531632    ABR88243.1    KM083778    AIR09759.1    AF261970    AAF74732.1    HM209426    Y12283    KZ150104    ADI32887.1    CAA72962.1    PZC73444.1    AY587164    AAT95356.1    PCG79493.1    JTDY01004416    KOB68185.1    KU302250    AOQ30448.1    NWSH01002022    PCG69396.1    KPI95069.1    PCG79486.1    FJ205402    ACR15970.1    EF531637    ABR88248.1    EF635223    ABU96714.1    KP730443    AKR06191.1    GDQN01010607    GDQN01006137    JAT80447.1    JAT84917.1    AY953061    AAX62034.1    JQ429438    AFW03963.1    FJ205428    ACR15995.1    PCG79472.1    FJ940726    ODYU01006287    ACR25157.1    SOQ47996.1    JQ340915    AFP74111.1    AY953063    AAX62036.1    AY513649    AAR98918.1    RVE51124.1    EF104916    Y12271    ABP96918.1    CAA72950.1    PZC75527.1    AF064525    AF064526    AAC36247.1    AAC36248.1    AY953062    AAX62035.1    KZ150747    PZC70338.1    KM360188    AKH49604.1    Y12269    CAA72948.1    PZC73449.1    L16805    PZC73446.1    MF407317    AWL83213.1    GDQN01002626    JAT88428.1    ODYU01000133    SOQ34395.1    AY953060    AAX62033.1    PZC73450.1    EF531636    ABR88247.1    PCG79483.1    AJ007706    CAA07611.1    MH201548    QAR48641.1    DQ356009    ABC87051.1    JN793545    AFO68325.1    AY587159    AAT95351.1    KQ459167    KPJ03460.1    L04749    U12917    AAA84423.1    L16807    KPJ03463.1    JX195649    AFQ37932.1    Y12270    CAA72949.1    AY953059    AAX62032.1    AY040819    AAK81696.1    ODYU01002655    SOQ40442.1    KPJ03458.1    JX195652    AFQ37935.1    PZC73443.1    PCG79487.1    Y12276    CAA72955.1    PZC70339.1    RSAL01000013    RVE53439.1    NWSH01000830    PCG73960.1    AY587145    AAT95360.1    EF531634    ABR88245.1    EF531635    ABR88246.1    PCG79498.1    KM083777    AIR09758.1    GBRD01013231    JAG52595.1    EF104917    ABP96919.1   
Pfam
PF00089   Trypsin        + More
PF00226   DnaJ
PF07743   HSCB_C
Interpro
IPR001314   Peptidase_S1A        + More
IPR004640   HscB       
IPR009003   Peptidase_S1_PA       
IPR018114   TRYPSIN_HIS       
IPR036386   HscB_C_sf       
IPR001254   Trypsin_dom       
IPR001623   DnaJ_domain       
IPR033116   TRYPSIN_SER       
IPR036869   J_dom_sf       
IPR009073   HscB_oligo_C       
SUPFAM
SSF50494   SSF50494        + More
SSF46565   SSF46565       
SSF47144   SSF47144       
Gene 3D
PDB
5CE1     E-value=2.96922e-15,     Score=198

Ontologies

Topology

Subcellular location
  
SignalP
Position:   1 - 23,         Likelihood:  0.739984
 
 
Length:
273
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.76587
Exp number, first 60 AAs:
0.15257
Total prob of N-in:
0.02967
outside
1  -  273
 
 

Population Genetic Test Statistics

Pi
283.209746
Theta
171.294921
Tajima's D
1.870229
CLR
0.270498
CSRT
0.861806909654517
Interpretation
Uncertain
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