SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09686  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012954
Annotation
PREDICTED:_28S_ribosomal_protein_S15?_mitochondrial_[Papilio_xuthus]
Full name
28S ribosomal protein S15, mitochondrial      
Alternative Name
DmMRPS15
Protein bonsai
Location in the cell
Mitochondrial   Reliability : 1.744 Nuclear   Reliability : 2.437
 

Sequence

CDS
ATGTTGCGACGTTTTGCCTGTTCTGCTATTCAAAGCCGTGGCTTAAAACACCAGGTCAACATTAAATGGGTTCGTCCTGAATATGTGCCTGCGTACAAACCTGAAAAATCTGGTGATTTAGAAGGCTTACCACCCATTCCTGAGAATTCTATCGCTGATATCTATGCTTTAAGCGAAGAAATCAAGGATGCTCCAGAATCGGTAAAAAAAATATTTTCTGTGGCACATCTTGGACAAAAAGAATTTCACACATTGGTCAAGAAAGAACTAGTAAACAGAGTGAAGAGGCATCAGTATGATGAAAACTCAGCTGAAAATAAGATTGCAAGATTAACTGCATACATTCGTTGTATACAAAACATAATGGAAAAAAACCCTAGGAACTCAAAAATGAAGCAAACTGTACAAGAAATGATTGATCGAAGGAAGAAACTATTGAAATATTTGCGGCAGTACGATTATAAAAAATTTGAATGGTTATTGGAGAAACTCAATATTGAGTACAAAGGGAATCCTGAGTCATTTCACAAATTATCACGAAGAGAATCACTACGCAAACTGACAGAGCTTCATTGTGATGACATAAGAAACAGTAAATTAGCAGGCTACAAAAATTTACTAGAAAGCCAGCAAGGGCCATTTTTAAAACAAAAGCTGGAAGCTCTCAAGTTTATCCGAAGTGAACAAACAGAATTGCAACTCCCTGTGACAGTTACAGAACAGGCAATAAAAGCAGTTGAGAAACAATTAGAAGAATGGACAATCAAAGACAAAATAAAACAAGAAGCCAAGAAAAAGAAGAGAAATCTATTGGAAGATTAA
Protein
MLRRFACSAIQSRGLKHQVNIKWVRPEYVPAYKPEKSGDLEGLPPIPENSIADIYALSEEIKDAPESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKQTVQEMIDRRKKLLKYLRQYDYKKFEWLLEKLNIEYKGNPESFHKLSRRESLRKLTELHCDDIRNSKLAGYKNLLESQQGPFLKQKLEALKFIRSEQTELQLPVTVTEQAIKAVEKQLEEWTIKDKIKQEAKKKKRNLLED

Summary

Description
Essential for gut mitochondrial activity. Might be involved in tissue specific growth factor production.
Subunit
Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.
Similarity
Belongs to the universal ribosomal protein uS15 family.
Keywords
Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  
Feature
chain  28S ribosomal protein S15, mitochondrial
EMBL
BABH01003616    NWSH01000362    PCG76975.1    ODYU01004448    SOQ44327.1    GDQN01002732    + More
JAT88322.1    KQ460878    KPJ11566.1    KQ459582    KPI98881.1    JTDY01002292    KOB71726.1    AGBW02009293    OWR51169.1    RSAL01000115    RVE46896.1    CH478467    EAT32927.1    GFDL01008967    JAV26078.1    CH477213    EAT47650.1    AAAB01008960    EAA11722.3    DS231843    EDS35478.1    APCN01001544    GAPW01003225    JAC10373.1    AXCM01000549    KQ971343    EFA03294.1    GGFM01004971    MBW25722.1    GGFM01004911    MBW25662.1    GGFK01009020    MBW42341.1    ADMH02001639    ETN61651.1    GGFJ01008198    MBW57339.1    GGFJ01008205    MBW57346.1    GAPW01003174    JAC10424.1    GAMD01002520    JAA99070.1    GGFJ01008197    MBW57338.1    AXCN02000367    PYGN01001431    PSN34888.1    GGFM01004965    MBW25716.1    GAKP01012499    GAKP01012497    JAC46455.1    GAMC01018772    GAMC01018769    GAMC01018765    JAB87790.1    KK852665    KDR19003.1    GEZM01075002    JAV64348.1    GFTR01004474    JAW11952.1    GDHF01007728    JAI44586.1    CM000362    CM002911    EDX08224.1    KMY95819.1    CP012524    ALC41548.1    AF435962    AE013599    AY060712    ATLV01010627    KE524589    KFB35594.1    EZ422926    ADD19202.1    CH933808    EDW08510.1    CH940648    EDW60020.1    CM000158    EDW91810.1    CH480824    EDW56795.1    CH954179    EDV54901.1    OUUW01000001    SPP74339.1    GECL01002500    JAP03624.1    GBYB01003745    GBYB01003746    JAG73512.1    JAG73513.1    GDKW01002525    JAI54070.1    ACPB03016592    GAHY01002208    JAA75302.1    KB632364    ERL93605.1    BT128640    AEE63597.1    APGK01037630    KB740948    ENN77391.1    GBGD01002474    JAC86415.1    CH902619    EDV36531.1    CVRI01000075    CRL08535.1    CH479181    EDW32364.1    CM000071    EAL25389.1    GBRD01001037    JAG64784.1    GBHO01003429    GBHO01003426    JAG40175.1    JAG40178.1    CH916367    EDW01657.1    GEMB01000061    JAS03048.1    JRES01001157    KNC25096.1    ABLF02035743    CH964154    EDW79660.1    UFQT01000007    SSX17473.1    GBHO01003428    JAG40176.1    GBHO01003427    JAG40177.1    KA647665    AFP62294.1    KZ288361    PBC26978.1    AJWK01026376    AJWK01026377    GFDF01001684    JAV12400.1    KQ434781    KZC04484.1    GFDF01001685    JAV12399.1    KQ760184    OAD61620.1    KQ435784    KOX74605.1   
Pfam
PF00312   Ribosomal_S15
Interpro
IPR009068   S15_NS1_RNA-bd        + More
IPR000589   Ribosomal_S15       
IPR005290   Ribosomal_S15_bac-type       
SUPFAM
SSF47060   SSF47060       
PDB
6GAZ     E-value=5.02992e-10,     Score=152

Ontologies

Topology

Subcellular location
Mitochondrion  
Length:
273
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.05149
outside
1  -  273
 
 

Population Genetic Test Statistics

Pi
238.865449
Theta
204.659676
Tajima's D
0.633148
CLR
0
CSRT
0.553372331383431
Interpretation
Uncertain
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