SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09685
Pre Gene Modal
BGIBMGA012878
Annotation
K3_protein_[Bombyx_mori]
Full name
SH3 domain-containing protein Dlish      
Alternative Name
Dachs ligand with SH3 domains
Location in the cell
Nuclear   Reliability : 3.155
 

Sequence

CDS
ATGGCATTTCTATGTCCAGTCAGGATCAGAAGGGGAAAGAAGAAGAAATCAAGTTCTGGAGACTCTGACAAAGACCTCTCCAGGCCCAGTTCAGGACTGAGTCCTGGGATGGGCCGCATCACAGGATCAGCAAGCATAGAAACATTAGTGAGAGTTGGCATTGAGAAGGAACATGGCCTCAGTCCTGATTCGAAGATGGTGGTGCTCCATGATTTCACACCATGTGTGGATGACGAGTTAGAGGTAAAACGTGGACAAATTGTTAATGTTCTATATAGAGAAAATGATTGGGTTTATGTCATAGTAGCAGAATCTCGAAGAGAAGGCTTCATACCGCATTCATATTGTGCACCATGTGAACATCATGATTTAAAGAAAAAACTCCCGAGAAGTAGATCCCCTGCCGATTTAGCCCATCGAGATGTTTCACAATTATCTGTATCTGATGGAGTAACAAATGATGGGCATTCAGAGCTTGGTAGTGAAGGTGAAGCATGTCCCTTTAGCAAAGATCCTTCAGGAAGATACGTAGTGCTATACACATTCACTGCAAGAGATGAAAATGATGTTGACGTAGAACGAGGAGAATTTGTTACAGTACTAAACAGAGAAGACCCAGATTGGTATTGGATAGTAAGGAGTGATGGTCAAGAAGGGTTTATACCATCTGGTTTTGTGTATCCTGCTGTCGTTCAAGCCACCACACAAGAGAACACACAGACCTTGCATCCTACGCCGCCAACAAATACAAATAACAGTATAATATCAACAAATAACAACAGTAGTATAAACAACACAACACAGCAGGACAACGACGGGAGGTATCACGGAACGGAACTAGTCATGCTTTATGATTACAAGGCTCAAGCACCTGACGATCTGACAGTGAAGCGAGGAGAGTGGGTTTATGCAGATCTGACCCAGCAAACTGTAGAGGGATGGTTGTGGGCACACGCACCCAAGTCACGACGATCCGGTTTCATACCTACAGCTTACGCTCGTGCACCTCACACTACATCACTTTGA
Protein
MAFLCPVRIRRGKKKKSSSGDSDKDLSRPSSGLSPGMGRITGSASIETLVRVGIEKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSYCAPCEHHDLKKKLPRSRSPADLAHRDVSQLSVSDGVTNDGHSELGSEGEACPFSKDPSGRYVVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEGFIPSGFVYPAVVQATTQENTQTLHPTPPTNTNNSIISTNNNSSINNTTQQDNDGRYHGTELVMLYDYKAQAPDDLTVKRGEWVYADLTQQTVEGWLWAHAPKSRRSGFIPTAYARAPHTTSL

Summary

Description
Required for the apical cell cortex localization, total cellular level and full activity of dachs.
Subunit
Interacts with dachs (via C-terminus); the interaction is direct. Interacts (via N-terminus including SH3 domain 1) with palmitoyltransferase app; this leads to palmitoylation of Dlish by app. Also interacts with dco, ft, ft-regulated E3 ubiquitin ligase Fbxl7, F-box protein slmb and SCF E3 ubiquitin-protein ligase complex component Cul1.
Keywords
Complete proteome   Cytoplasm   Lipoprotein   Palmitate   Reference proteome   Repeat   SH3 domain  
Feature
chain  SH3 domain-containing protein Dlish
EMBL
AB162719    BAG06921.1    KQ459582    KPI98882.1    RSAL01000115    RVE46895.1    + More
ODYU01004004    SOQ43438.1    GAIX01009190    JAA83370.1    NWSH01000362    PCG76974.1    AGBW02009293    OWR51168.1    BABH01003616    BABH01003617    KQ460878    KPJ11565.1    GEZM01045472    JAV77794.1    KQ971343    EFA04249.1    GEZM01045473    JAV77793.1    CH477213    EAT47651.1    KB632288    ERL91551.1    DS231843    EDS35479.1    GDUN01000898    JAN95021.1    GFDF01006425    JAV07659.1    PYGN01001431    PSN34887.1    CM002911    KMY94661.1    AE013599    BT099964    ACX47665.1    JXUM01001336    JXUM01001337    JXUM01001338    JXUM01001339    BT001682    AAN71437.1    CH954179    EDV54960.1    AJWK01026374    AJWK01026375    AJWK01026376    AJWK01026377    AJWK01026378    CH480816    EDW48344.1    CM000158    EDW91752.1    GBBI01002334    JAC16378.1    NEVH01007841    PNF34961.1    GBHO01028377    GBHO01028374    GBRD01010169    GDHC01011508    GDHC01008950    JAG15227.1    JAG15230.1    JAG55655.1    JAQ07121.1    JAQ09679.1    GECU01020917    JAS86789.1    KK852665    KDR19006.1    CH902619    EDV36988.1    GANO01001700    JAB58171.1    GEDC01011039    JAS26259.1    CH479183    EDW36222.1    CM000071    EDY69167.1    NCKU01001905    NCKU01001883    NCKU01001620    RWS10946.1    RWS11011.1    RWS11645.1    OUUW01000001    SPP74891.1    NCKV01004237    RWS24941.1    CH916367    EDW01799.1    CH917862    EDW04895.1    GFXV01007506    MBW19311.1    ABLF02035819    JRES01000265    KNC32818.1    GFPF01008166    MAA19312.1    GEDV01007009    JAP81548.1    GACK01005885    JAA59149.1    GGLE01006053    MBY10179.1    CH964282    EDW85791.1    CH940648    EDW62244.1    JH431388    GEFM01007005    JAP68791.1    CVRI01000075    CRL08533.1    GEFH01002821    JAP65760.1    CRL08534.1    CCAG010011939    IACF01002704    LAB68349.1    KK114767    KFM63263.1    JXJN01018905    AXCM01000549    NNAY01000120    OXU30784.1    SAUD01009372    RXG61563.1    LJIG01009135    KRT83685.1    LBMM01003433    KMQ93545.1    KQ767320    OAD53401.1    KQ976433    KYM87279.1    GL888207    EGI65025.1    KK108267    EZA46792.1    KQ982944    KYQ48882.1    KQ977720    KYN00460.1    ADTU01004650    ADTU01004651    GL764026    EFZ18861.1    GL451131    EFN79958.1    KZ288254    PBC30860.1    KQ434844    KZC08175.1    GL441846    EFN64152.1    KQ981685    KYN38022.1    AJVK01061554    QOIP01000012    RLU16104.1    CH478467    EAT32926.1    GDAI01000623    JAI16980.1    AAAB01008960    EAA11721.5    GGFM01005174    MBW25925.1    KQ978747    KYN28660.1    GGMR01006731    MBY19350.1    ADMH02001639    ETN61650.1    GGFK01006074    MBW39395.1   
Pfam
PF00018   SH3_1        + More
PF00168   C2
PF14604   SH3_9
PF02437   Ski_Sno
PF08782   c-SKI_SMAD_bind
Interpro
IPR036028   SH3-like_dom_sf        + More
IPR001452   SH3_domain       
IPR000008   C2_dom       
IPR001565   Synaptotagmin       
IPR035892   C2_domain_sf       
IPR014890   c-SKI_SMAD4-bd_dom       
IPR023216   Tscrpt_reg_SKI_SnoN       
IPR037000   Ski_DNA-bd_sf       
IPR003380   SKI/SNO/DAC       
IPR010919   SAND-like_dom_sf       
IPR009061   DNA-bd_dom_put_sf       
SUPFAM
SSF50044   SSF50044        + More
SSF46955   SSF46955       
SSF63763   SSF63763       
Gene 3D
PDB
1GRI     E-value=4.23967e-08,     Score=137

Ontologies

Topology

Subcellular location
Cytoplasm   Low levels are found diffusely in the cytoplasm with high levels concentrated at the subapical cell cortex.   With evidence from 3 publications.
Cell cortex   Low levels are found diffusely in the cytoplasm with high levels concentrated at the subapical cell cortex.   With evidence from 3 publications.
Length:
341
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00013
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01162
outside
1  -  341
 
 

Population Genetic Test Statistics

Pi
336.213716
Theta
228.844802
Tajima's D
1.546034
CLR
0.463797
CSRT
0.79846007699615
Interpretation
Uncertain
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