SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09683  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012955
Annotation
hypothetical_protein_KGM_09254_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 4.606
 

Sequence

CDS
ATGCCGTACCGCAGGCGCTTTCCGGTTAAGATGCAGGATTACGAGGACGACGTCACCGTCGTCGATGTGTACGATCTTGCATCGGATATTGGTAAAGAATGTGAGATAATTATTGAAAAATACGGCCCTGACGCCGTTACAGCTTTGCTGCCGAAGGTAATAAACACACTGGAACTCCTGGAAAACTTAGCCGTCAGGAATGAGAAGGAAAATCAAGCGTTACAGGAGCTAACAGCAAAAATTTCGCAGTTGGAAAACGACAAGATTGAAAAGGCTGAATACAGACAACGGTTCGAAAAGGAAATCGAAGCTATAGAAGAGCAATGGCGAACCGAATCGGCCGAGTTAGTAACGGCTGTGGCGAGACTTCAGGACGAGAACAAGCGTCTCCGGCGAACAATAAACGCGCCTGCGGACGGTACAAGCGCGCCGCCGTCTCCGGCACGTGAACACGATCAAGAAGTGCTGTCGCGACTGAGCAGTACCGCGGAGAAACAGCGTGCCACTCTACGTCTCCAAGAAGTGCAACTCCAAGAAAAACAACAGCAGATTGATAGCCTGACAAACCAGCTAGCCCAGGTCAGTCGGGATCTCAGGCGGAAGTACAAGCAGCTACAGAATCAGATGCGGCTCGTGTGCGAGGAGCGTTCGGAGCTGACTGCCATCGTACAATCGCAGCAACGGGACATATCCGCGTTACAGCAAACTAAAGCGCAACAAAAGAAATGCGCAACATGCGGCTCGACGTCCCCCGAAGCTCCGGACGAGGAAGATCAATCGACGAAAGCTTCATACAGCGCGATACTGCACGAGCGGAATGAGCTCCAGCTTAAATTGAACCGCGCCGAAGAACAGATCCGGGCTCTGCAGATCGATCCGCAGCCAGACAGTAGCGGTTCAGACTCGTCGCCGTCGCTGAGCTCGGCGGCGCCCGACGAGGAGCCGCCCGTGCAGGGCCCGCTGCCCGCGGAGCCCGACGACGCCCCATGGAAACGACGCGGCGGCATCAGGAAGTTCCACGGACGCGGAGTTTTCGCAAGTTCCTTGCTGAGTGTGATATCTCCGTGGGATCGTTCCCGCGTCGTTCACTTTCCACGTTCGGTGGCAAGGCTACCTCGACCCCCGGCTCCGCCCCCGCCCCCTCGTAGACACTCGGACCCCAACTCGGCATCCGAGAAAACTGAAAAACACCGAAGGTACTCCGATATAAAACACCCCGCCTCCAGATTAGACTTGCGACAGGAGTTACAGAATCTAAATCCCAACAGCCATGAGTTCGATGGTTGGCTCGGTGCTAAATTCGACGAGAAGGATGAACGTGTTTGCGACAATCGATTTATTTACGATCACGATGTTCCCTTGCAAAGGTCGATATCACTCGACGGGGGCGTTGAGATATTTAATTACCTACAGAGTTTGGGATCAGATTGGTCGGGTAGCAGCGTCGGCTCTGCGTGGACGATCCATTCCGAGGATCGAGACAAACTAACGATGGAACAGTACAGGAGTTTCGAGGATATCCCGGCTTCTCCGATTAAAGGGAAAAGCAGGCGTGCATCCTCTGACGTGGATAATGCGTTTTTTGGAAGGAATTTAGCTCTGTCTGTATTAAGGGACAGTTTTAAAGGCGTGGAAACGAACAACAGTAGTTTCTCGCCGCAGATAAAGAAATTACAGAGGTGTTACACTACATCTGGTTCATTCGAGGACTTCGGACTACGAGTTTCATCTCGGAATTCATTCGATAGTATGGCACGTGATGTCTCTCAACATGTAAGAAGAATATCTAGCACTTCTGTTCTGGATTGTACTAAAGATGGATACTCAAAAGAAAGAAGCTCCCAAGTAACTTTTTCGCATTCCTATAGTGACAGGCGTTTGGGATTGAACGAGTATGAGGATGAGGATTACATTGAAATGCGTGTTCCTTATTACAGAAGTATATCTGTTGCTTCGAGCAGTGATGGTAATGGGGCGGGGGGTGTTCGTCGGAGGCGGGTAGGCGTGTTCGATTCTTCGTTCCCGGGAATCGTTAGAGAAAGGAATTTGAGGATGGAGGTCATGAAAAAGGGTTTTGAATCCAAGAGCTGCGACAATCTACCGACTCGAAGAGTTGACGGGTCCGGCTGTAGAACAACAGATCCGGCTGGTACAAAAATGTTTAATGGAACGCATAAATGTAAATACAGTGACCTGAGAATGTCCGCTAATGAGATCTTGGATTCGATCGGAGCAAAGGAAACGTGTGTCAATTTAGAAGCGGCGGATAAAGTCGTGCCCGCGATCGTGGTTACAGACGCCGACTGTACCGATGGCGGTGTTGCCAAAGCAGAGAATATGAAATCTTCCACTTCCAATTTAGTAAGTAGAAACTGTGACTGTCGAATTTGTACCGAAGCTGAGGACGTAGAAGGTAGATGTTTCCTGCGTAAAATGCTAAGTAAATTATTTGTTAAGATGGTACTGTGTAGCGATTACGGTAGGAAATTGACGTATTGGGACGAGAATAACAACATGAATGAAAATGAAATGTACACTTGTTTCACTAATATATTGAAGTTAATGCTGGGTTTGTGGTTGCGGCATTTAGATCATAATTGA
Protein
MPYRRRFPVKMQDYEDDVTVVDVYDLASDIGKECEIIIEKYGPDAVTALLPKVINTLELLENLAVRNEKENQALQELTAKISQLENDKIEKAEYRQRFEKEIEAIEEQWRTESAELVTAVARLQDENKRLRRTINAPADGTSAPPSPAREHDQEVLSRLSSTAEKQRATLRLQEVQLQEKQQQIDSLTNQLAQVSRDLRRKYKQLQNQMRLVCEERSELTAIVQSQQRDISALQQTKAQQKKCATCGSTSPEAPDEEDQSTKASYSAILHERNELQLKLNRAEEQIRALQIDPQPDSSGSDSSPSLSSAAPDEEPPVQGPLPAEPDDAPWKRRGGIRKFHGRGVFASSLLSVISPWDRSRVVHFPRSVARLPRPPAPPPPPRRHSDPNSASEKTEKHRRYSDIKHPASRLDLRQELQNLNPNSHEFDGWLGAKFDEKDERVCDNRFIYDHDVPLQRSISLDGGVEIFNYLQSLGSDWSGSSVGSAWTIHSEDRDKLTMEQYRSFEDIPASPIKGKSRRASSDVDNAFFGRNLALSVLRDSFKGVETNNSSFSPQIKKLQRCYTTSGSFEDFGLRVSSRNSFDSMARDVSQHVRRISSTSVLDCTKDGYSKERSSQVTFSHSYSDRRLGLNEYEDEDYIEMRVPYYRSISVASSSDGNGAGGVRRRRVGVFDSSFPGIVRERNLRMEVMKKGFESKSCDNLPTRRVDGSGCRTTDPAGTKMFNGTHKCKYSDLRMSANEILDSIGAKETCVNLEAADKVVPAIVVTDADCTDGGVAKAENMKSSTSNLVSRNCDCRICTEAEDVEGRCFLRKMLSKLFVKMVLCSDYGRKLTYWDENNNMNENEMYTCFTNILKLMLGLWLRHLDHN

Summary

Pfam
PF09744   Jnk-SapK_ap_N        + More
PF11461   RILP
Interpro
IPR019143   JNK/Rab-associated_protein-1_N        + More
IPR021563   RILP_dimer       
IPR034743   RH1       
IPR034744   RH2       
PDB
6F1U     E-value=0.00323806,     Score=99

Ontologies

Topology

Length:
866
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02701
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00048
outside
1  -  866
 
 

Population Genetic Test Statistics

Pi
233.511908
Theta
164.499431
Tajima's D
0.992794
CLR
0.584929
CSRT
0.652767361631918
Interpretation
Uncertain
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