SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09672  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012960
Annotation
PREDICTED:_phosphatidylinositol_transfer_protein_alpha_isoform_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 4.062
 

Sequence

CDS
ATGATTATCAAAGAATACCGAGTCACACTTCCTCTAACAGTTGAAGAGTATCAAGTGGCCCAGTTATACTGCGTGGCGGAGGTCTCCAAAAATGAAACCGGCGGAGGTGAAGGCATAGAGGTCATAAAGAATGAACCGTTCAAAGATTATCCACTGCTCGGTGGAAAATACTCGTCTGGACAGTACACGTACAAGATCTACCATTTGGCGTCCAAAGTTCCGGCCTTCATCAGGCTACTTGCTCCGAAAGGATCTCTCGAAGTACACGAAGAAGCGTGGAACGCCTACCCGTACTGTAGAACAGTGCTGACGAATCCCGGTTACATGAAAGAAAACTTCGTTATATGTATAGAATCGCTGCATTTACCGGACGCCGGCGACCAATACAATGTCCACGAGCTGCCGCCTGAGAAACTAAAGACCCGCGAGGTGGTCCCCATAGACATTGCGAACGACCCCCTCCCGTCGGCCGACTACAAATCGGAGACCGACCCGACCAAGTTCAAGTCTACGAAGACCGGCCGCGGACCGCTCGTCGGGCCAAACTGGAAGAACGACGTGAAACCGGTCATGACGTGCTACAAGCTCGTCACGGCCGAGTTCAAATGGTTTGGTCTCCAGAATAAGGTAGAGAATGTCATCCAGAAATCGGAGCGACGATTGTTCACAATCTTTCACAGACAAGTGTTCTGTTCGATGGACGACTGGTACGGAATGACGATGGCCGACATCCGAGCTATCGAGGATCGCACCAAGGAGGAGTTGGAGAAGCTGCGGCGCGAGGGAGAGGTGCGCGGCATGCGGGCCGACAACGAGTAG
Protein
MIIKEYRVTLPLTVEEYQVAQLYCVAEVSKNETGGGEGIEVIKNEPFKDYPLLGGKYSSGQYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIESLHLPDAGDQYNVHELPPEKLKTREVVPIDIANDPLPSADYKSETDPTKFKSTKTGRGPLVGPNWKNDVKPVMTCYKLVTAEFKWFGLQNKVENVIQKSERRLFTIFHRQVFCSMDDWYGMTMADIRAIEDRTKEELEKLRREGEVRGMRADNE

Summary

EMBL
RSAL01000115    RVE46885.1    NWSH01000261    PCG77911.1    GDQN01004885    JAT86169.1    + More
GDQN01004291    JAT86763.1    GAIX01004272    JAA88288.1    KQ460878    KPJ11552.1    KQ459582    KPI98896.1    AGBW02009293    OWR51157.1    GGFK01002383    MBW35704.1    GDHF01025176    JAI27138.1    GGFM01001659    MBW22410.1    GGFL01004360    MBW68538.1    AAAB01008987    EAA01271.5    AXCN02000031    AXCN02000032    GEZM01084713    JAV60709.1    UFQS01000197    UFQT01000197    SSX01191.1    SSX21571.1    JR042934    AEY59692.1    LBMM01001173    KMQ96783.1    KMQ96784.1    GL452364    EFN77400.1    BT128115    AEE63076.1    ADMH02002026    ETN59908.1    KQ971357    EFA08400.1    GFDF01002394    JAV11690.1    ADTU01011295    GFDF01002374    JAV11710.1    GFDG01000828    JAV17971.1    CH477293    EAT44497.1    GAMC01017331    GAMC01017330    JAB89224.1    GEHC01000257    JAV47388.1    GDAI01001834    JAI15769.1    GANO01000581    JAB59290.1    GL436748    EFN71539.1    GBXI01002291    JAD12001.1    KA646449    AFP61078.1    GBHO01006182    GBRD01007473    GDHC01004718    JAG37422.1    JAG58348.1    JAQ13911.1    GDHF01007887    JAI44427.1    GAKP01009739    GAKP01009738    JAC49213.1    GFDL01012722    JAV22323.1    EZ422840    ADD19116.1    CVRI01000048    CRK98825.1    QOIP01000004    RLU24233.1    GGFK01002360    MBW35681.1    CCAG010010579    CCAG010010580    NNAY01000198    OXU30066.1    GECZ01020556    JAS49213.1    LJIJ01000593    ODM96017.1    GGFL01004361    MBW68539.1    EGK97436.1    GECU01029243    GECU01022656    JAS78463.1    JAS85050.1    CH964272    EDW83800.1    KQ435883    KOX69696.1    CH902617    EDV43403.1    KPU80265.1    CM000364    EDX12360.1    DS232059    EDS33477.1    CM000160    EDW96001.1    KRK02836.1    AE014297    AF246993    BT083455    AAF55650.1    AAF61273.1    ACR16680.1    AHN57401.1    CH933806    EDW13792.1    CH954181    EDV48512.1    KK855626    PTY23327.1    OUUW01000008    SPP83780.1    AY094957    AAM11310.1    CH916374    EDV91297.1    JXJN01017442    JXJN01017443    CH940650    EDW67148.1    KZ288192    PBC34224.1    CM000070    EAL29167.2    CH479185    EDW38509.1    GFTR01004396    JAW12030.1    KK852619    KDR20111.1    KQ434954    KZC12530.1    GBGD01002510    JAC86379.1    GDKW01000664    JAI55931.1    ACPB03014848    GAHY01000610    JAA76900.1    KRG00643.1    KRG00644.1    KQ414934    KOC59262.1    AK340674    BAH71239.1    JXUM01086739    JXUM01086740    JXUM01086741    JXUM01086742    JXUM01086743    KQ563588    KXJ73626.1    KRT01332.1    APCN01002057    IAAA01040882    LAA09888.1    KRK02833.1    KRK02834.1    KRK02835.1    KRF83133.1    AGB96106.1    LNIX01000017    OXA45628.1    GFXV01005929    MBW17734.1   
Pfam
PF02121   IP_trans
Interpro
IPR023393   START-like_dom_sf        + More
IPR001666   PI_transfer       
Gene 3D
PDB
1UW5     E-value=3.53528e-83,     Score=783

Ontologies

Topology

Length:
272
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00133
Exp number, first 60 AAs:
0.0001
Total prob of N-in:
0.07678
outside
1  -  272
 
 

Population Genetic Test Statistics

Pi
273.705645
Theta
174.785726
Tajima's D
1.635087
CLR
0.039697
CSRT
0.814309284535773
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27102218 VTIPITVEEYQVAQIYCVAEVSK 96.30 7e-12
27102218 GPIVGPNWK 96.00 3e-10
28467696 EVVPIDIANDPIPSADYK 96.00 3e-10
27102218 WFGIQNK 100.00 1e-08
28467696 QVEYYFGDVNIHR 100.00 1e-08
28556443 NETGGGEGIEVIK 100.00 5e-07
28556443 EVVPIDIANDPLPSADYK 100.00 8e-06
28556443 YSSGQYTYK 100.00 8e-06
28556443 GVTVPTR 100.00 8e-06
27102218 NEPFKDYPIIGGK 100.00 9e-06
28556443 GPLVGPNWK 100.00 0.005
28556443 GPLVGPNWK 100.00 0.005
26822097 TVITNPGYMK 100.00 0.006
25044914 NESYTIHK 100.00 0.006
27102218 GSIEVHEEAWNAYPYCR 100.00 0.006
28467696 NESSSNTAAHEQVVR 100.00 0.006
28556443 NEPFKDYPLLGGK 100.00 0.006
28556443 EVVPIDIANDPLPSADYK 100.00 0.006
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