SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09665
Pre Gene Modal
BGIBMGA012962
Annotation
PREDICTED:_uncharacterized_protein_LOC105842047_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.123
 

Sequence

CDS
ATGACAGTAGTTCTAGAAGCATATTTCAGGGTAACGGACTATGCATCTGGCATTGTCGGTGTCAGTGCTATAGGTTGTCAAGTGTTGTCAAGCAAAGTATCGCAAAACTTCAATGGTATTGGGAGGGATTTCGCAGAAGAAAACAAGCCCGTTATTAAAGTTACTGTAATACCCAAACACGACAGACAAAGACCAAACAAACAAAGGCTCAAATCAAAGACAATAAAGAATACGTCTTCTGACCATGAATATTCTGTACACGCGAACAATTTATATTTTATTGTAACCGGAAATAACAGTAAAGAAAAAATCTACAACGTGAAAACAACAGAGAGCGCGGATTTTTCTTCTGAATATTCAAAAAAGCATCATGATATCGAAGAGATTTCTATTAAAGAATTATCGAACATCACTAGTCTGCTGAAATCACTGGATATGGAGAAAAATAAGAAGAAAGTAAAGAAAAATGTGAAAGATCACAAACCTCTGATGAACGTTACTATACATCCGAATTACAAACAGTGTAATTGCGTCAGCAAGGATTGCAGCAACATAACTGATGATTTGAACAAAGTAGCCAGCAGAGTCCGAATATTTGGACGCCTAGGTCTAAATAATAACGATGAGTTCGTTATGAATTGCGCTGCCACAGTAAATGATAGTCTAATTCCGACAAATTATCCTACAAATGAAAGTATATCCTCACCAGTTCATTACACGGACAGCACAAGACCACAGTCACCGATAGTTTTGAACAAAATCGCCTGCATCAATCCGGAATGTAGTAAAAATTGCGATCTCTGGTCACAAGACAGTCATGCTTATGGTCGGGACTTCAGGTAA
Protein
MTVVLEAYFRVTDYASGIVGVSAIGCQVLSSKVSQNFNGIGRDFAEENKPVIKVTVIPKHDRQRPNKQRLKSKTIKNTSSDHEYSVHANNLYFIVTGNNSKEKIYNVKTTESADFSSEYSKKHHDIEEISIKELSNITSLLKSLDMEKNKKKVKKNVKDHKPLMNVTIHPNYKQCNCVSKDCSNITDDLNKVASRVRIFGRLGLNNNDEFVMNCAATVNDSLIPTNYPTNESISSPVHYTDSTRPQSPIVLNKIACINPECSKNCDLWSQDSHAYGRDFR

Summary

Interpro
IPR036389   RNase_III_sf        + More
IPR000999   RNase_III_dom       
SUPFAM
SSF69065   SSF69065       
Gene 3D

Ontologies

Topology

Length:
280
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.34467
Exp number, first 60 AAs:
0.34454
Total prob of N-in:
0.04913
outside
1  -  280
 
 

Population Genetic Test Statistics

Pi
178.050515
Theta
140.673071
Tajima's D
0.911611
CLR
0
CSRT
0.633968301584921
Interpretation
Uncertain
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