SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09664
Pre Gene Modal
BGIBMGA012962
Annotation
PREDICTED:_uncharacterized_protein_LOC101738488_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.809
 

Sequence

CDS
ATGGATAAACAGAAAATGAATCCTACTAACAGACTATCAAATGTCAAAATCAATATTGATAACAATAATGAGTTTTACGATGTAACGCTGCAACAAGATAAAAGAACAACTGATTTGAAAATTAGAAAAAAAATCAAAGATGATTCCGCAAAGAACGTGTTAACTGATGTATCTGTTAAGGAGCCTAAGAGAAAATCTCGTGACTTTTGTTGTAGGACTCGAACTGATACAGGGAGGCGTTCTGAAAAGCCAAATATAAATATTCGAGATAGTTTGGAAATTTCTCACAGGCGTGAAACCAATCAAGGCTTAAAAAATATGCAAATAAAAAACAGCAAAACAAAAAACGACGATTTAGTAAACAGAGCTCATATCAAACATTTTGTTGGAGATAGCTGCAAGCTTCCTGATCCCCTTGAGAGAGATAAACAAATTAGGGAACTACTTGGATTGAATTGGATACATCAAAGTGTGGGTACTACGTCAAAGATAACAAAAATGCAGTCTAATTCCTTTGGAAACATTAAAGAAGACATTCATTTAAGAAAAAAGGTCTCTACAAAACACCGCGATAACAACTCCCAAACTGAAGAAACAGAAATCATACACGAAATTGGAAAAAATATATTTAAAACTGCGGAATTTGCCACCCAGTGTGACCGAGAAATAAATAGAACCATATACCAAGAGCTCGTTCTTCACCGAAACATCGAAGTGTTCTTACAATTTGATCGTTTCACAAAACAAAAGCCAGTCGTATTATCTCGAAGACAGTACGTAACAATCAAGAGAACTTTACAGAAAAGCATGTCAAAAAGAGCCAATTTAGACAAAAGGAAGAATTGCATTTGCAAACGAAGCTTAGTTTCCGTTGGTGACGTCAAAAAGAAAATACGAAAATTAAAATTATTCAATAACGGCTGTGATAAGATAACTCAGACCGAAACACAGACACAGATCCCGCTGTCTAGCAATAATAGAAGACTACTAACAAATAATTCGAACGGTCGTATTGAGAGTTGTTGCGATGAAACCGAACAATTACAGACTATTGTTCTGTTCAATTCTAAAGATGTACAAAACAAGATGCCTGAAGAGTTGTCGGTTCCCACAAGACAAGCGGTTTCGTCCGTAGAAGTTAATTATAGCGTTTCTTGTAAGCAAAATGTATCGTTTTCTTCGACTAAAATTAATTCATTGCACTCGTCGAACTTTATAGTTAAAAAGGATTCAATTCAAACTCTATTCAGAGGTTGGAGAAAATCTCCCACTCCAAATCTAGGAACATCAGCTTATTCATTAGATTCCGAAGCGATCGAACCGCTCACGACATCAGTTAGAAATTTGATGGAACCGTTCAAAATTGAGAAGGAGGAAAATAGGCGACCATTTTTCAAGAGATTAATGTCTTGTCTGGTGATGCGATCGAAAATTTCGCAAATTAAAATACCGACGAATCCGTCTCCGTTGCCAATGGAAACATCTATGGATTCTTATCACATTAGTACGTCGCTCGGTGCAATGGAAATGACTTCGTCCATGTATGACACGTCGATTTCGTTCTACACCGACCACAACGTGTTCGAAACTAGCAGTAAAACAAAACGAAGCTTCTTTAATTCCGTGAGAGGCTTTCTAACAAATCGTAAGAGTTAA
Protein
MDKQKMNPTNRLSNVKINIDNNNEFYDVTLQQDKRTTDLKIRKKIKDDSAKNVLTDVSVKEPKRKSRDFCCRTRTDTGRRSEKPNINIRDSLEISHRRETNQGLKNMQIKNSKTKNDDLVNRAHIKHFVGDSCKLPDPLERDKQIRELLGLNWIHQSVGTTSKITKMQSNSFGNIKEDIHLRKKVSTKHRDNNSQTEETEIIHEIGKNIFKTAEFATQCDREINRTIYQELVLHRNIEVFLQFDRFTKQKPVVLSRRQYVTIKRTLQKSMSKRANLDKRKNCICKRSLVSVGDVKKKIRKLKLFNNGCDKITQTETQTQIPLSSNNRRLLTNNSNGRIESCCDETEQLQTIVLFNSKDVQNKMPEELSVPTRQAVSSVEVNYSVSCKQNVSFSSTKINSLHSSNFIVKKDSIQTLFRGWRKSPTPNLGTSAYSLDSEAIEPLTTSVRNLMEPFKIEKEENRRPFFKRLMSCLVMRSKISQIKIPTNPSPLPMETSMDSYHISTSLGAMEMTSSMYDTSISFYTDHNVFETSSKTKRSFFNSVRGFLTNRKS

Summary

Interpro
IPR036389   RNase_III_sf        + More
IPR000999   RNase_III_dom       
SUPFAM
SSF69065   SSF69065       
Gene 3D
ProteinModelPortal

Ontologies

Topology

Length:
551
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00101
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00884
outside
1  -  551
 
 

Population Genetic Test Statistics

Pi
221.200427
Theta
169.863566
Tajima's D
0.950636
CLR
0.399697
CSRT
0.63796810159492
Interpretation
Uncertain
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