Gene

KWMTBOMO09657  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012967

Annotation

hypothetical_protein_KGM_15573_[Danaus_plexippus]

Location

Bomo_Chr16(-):6377295-6392016      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.174

CDS

ATGGCGATAGTAGAAGACGAAATTCAGAACGGTTCTGAAGGGGAAAATGAAATTGAAGTTGTGGTTGAAGAAGATGATGGCGACCAGGATCCAGATTCTGATGATGAAATATTGGAGATGGGAGATTGGCAGAGGAAAGTGGCCGAATATGAACACAAAATCACATTACATCCTTTTAATTATGATGATCACATTGAATTGATCCAGACTTTGTGGCGTCTATCGGAACTGGGGCAATGGCGAACGGCGTTTGAAAGATTATGGGAGATGTCAGTTATAAAAGTTGATCATTGGCTCTTGTGGCTCCGAACAGAAGAGAATATTTCACAGTCTGAAGAACTAATTGCCAATTTATTCTATAAGGCAACCTGTGATTGCTACTCTATGTCTATACTGTCAAGATGGAGTTCGTGGGCCCTTTCATTAGATGAAATACCTAAAATTCGAGCGCAACTTGACGAAGTTTTGCGTCGTGGAGGCTCCGATCCGTATTCAGGAAAAGTGTTGTGGGATCTAAAAATTGACTTTGAAAAATCACAATTAAATGAGACATGCAAAGAAGATTCGGGTTATAAAGAACAAGAAGACCGTGTGTTGAGGTGTTTAGAGGTAGTGGCATCGCTTCCTATAAGCAGAAATCAGGAGGCATGGGATCTATTTGAAGATTTTGCTAAAGATATCCGTGAACAGGAGTACATAGAGAAGGTGGAACAGCAACATAAGGCAGCTGTGGATTACTTAAAGAAAATTATGCCATATGAAATCAGAACAAAGACCACTCAATGTTATATGGCCAATTACAAGGTATACCTTGAGTATATTGATCTTGTGAAGCAGTTGTCTGTAGAAGAGAAGTATGCTGAATGTGATAGCGACGGTCTGCTCAGGCTCCTGTACGACCGGGCGACGTACGAATGTCTGCTCAATCCGGCCGTGTTCGAGTTGCTGGTCGAGTTCGCGAAGCACACCCAGGTGACGTCATCACGCGCGACGTACTGGCGCGTCCTCGAGCTGTGCACGCGGCGCTGTCCGCAGAAGCACACCTTTTGGACCCTCAAGATGCAGCAGGCTGAACACGAGGAGAAAGACTTCGACGAGGTGAAGTCGATCTTCGAGACTGCCTTATCGAAAGGTCTGGAATCTTACAAGGAGGCTGAAATGCTATGGCTGAACTATCTCGAGTACGTGCGCCGCAACACGAAGTTCAGTGACGACGATCAGATTGAGCGGTTGAGGCGCACATTCAGGCTGGCCTGGGACTCGCTTGCTGAGGCATGGGGCGATGAAGCGAATGATTGTGAGATACCATTGTATTGGGCAAGAATTGAATACAAATTCTTGAATTCACCAAAACGAGGGAAAGAGATCTTTGAAGAATTATTCAAATATGGCTTCAATAAAACCATGTCCAAGTATTGGGAAGCTTTGATACAATTAGAAAGTAGCCGGTCTCCTCCGCTGTCCGAGTTCAAGTTCCGGGATCTGCTGAGACGCGCGTTGAGGTCGGTCACCGACTACCCCCCGGCCATAGCGCGCCTCTGGACTGATTACGAACGAGACTACGGGAAGCTGGACACCAGTAAGGAGTGTCAAGAAACTTGTGAGTTAAAAATACGGGAGTGGAGGAAGAATTATCAAGCCTTGAAGGAAAATATGACAAACAAAAACGATACTGATAAAACAAATGATAATAAGAAAGGAAAATCAGCCAACAAAAACAAAAAACTCGAAAACAAACAGAAAGGTAAAAGGAAATTGAATGGCGGTAGTGATGAAGCTAGTGACGTAAAGAGAAAAAGAGACGGAGATCAAGAATTGCCCGTGAAAGAAAAGGACGGAGGTAGCTCTGGAGTCAAGCGGGCACATACTGAAGAAGAGACTGAATTAACTGAGAATAAAAAACAGCGCGTAGAGGCGGCCGGTACAGCGCAGTCTGCGAGCACAGAGGCCTGCACATTGTTCGTCAGTAATCTAGACTTTAAAGTCGATGAAGATAAATTACGACAGGAATTATCGAAGTACGGTGACATCGTCGAAATGCGGCTCAGATCAGGAGTGAAATCGTTCGGCGGCTCTATTTGCTACTGTCAATACAAGACAGCGGACTCAGTGGAGGAGGCTCTGAAGCACGATCGAACTCCTTTAGACGGCAGACCGATGTTCTTGTCTCGATACTCGGCCGATAAATCTAAGGCGACCTTCAAATACGCTACCACGATGGAGAAGAACAAGTTGTTCGTGACGGGCCTGCCTTACTCGCGCTGCAATAAGGAGTGTTTGACCGAAATATTCGAGAAGTACGGCAAACTGAAAGACATCCGGGTGGTCACTTTCAAAGACGGGAAACCGAAAGGTTTGGCGTACGTCGATTACGAGGACGAAGATTCCGCGGCCAGAGCCATAGCGGCGACGAACGGCACGACGGTGGGGGACAGGAAAATAGAGGTCGCGATCAGCCAGCCCCCGCCCCGCGCCGCCCGCCCGACCCCCGCCAGCCGCCCGCCCGCCGCCGGCATGCGGCGGACGCAGCTAAGCTTCCTTCCTCGAGTTTTGCAGCAAGCCTCAACGAGCAAGGAGTCTTCGACAAACAGCCACGCCAACGGCACCGAGAAGCGACCTCTCTCTAATAGTGACTTTAAAAAAATGATTGCGTCATCTTCTTCTTCTCACGACAATTGA

Protein

MAIVEDEIQNGSEGENEIEVVVEEDDGDQDPDSDDEILEMGDWQRKVAEYEHKITLHPFNYDDHIELIQTLWRLSELGQWRTAFERLWEMSVIKVDHWLLWLRTEENISQSEELIANLFYKATCDCYSMSILSRWSSWALSLDEIPKIRAQLDEVLRRGGSDPYSGKVLWDLKIDFEKSQLNETCKEDSGYKEQEDRVLRCLEVVASLPISRNQEAWDLFEDFAKDIREQEYIEKVEQQHKAAVDYLKKIMPYEIRTKTTQCYMANYKVYLEYIDLVKQLSVEEKYAECDSDGLLRLLYDRATYECLLNPAVFELLVEFAKHTQVTSSRATYWRVLELCTRRCPQKHTFWTLKMQQAEHEEKDFDEVKSIFETALSKGLESYKEAEMLWLNYLEYVRRNTKFSDDDQIERLRRTFRLAWDSLAEAWGDEANDCEIPLYWARIEYKFLNSPKRGKEIFEELFKYGFNKTMSKYWEALIQLESSRSPPLSEFKFRDLLRRALRSVTDYPPAIARLWTDYERDYGKLDTSKECQETCELKIREWRKNYQALKENMTNKNDTDKTNDNKKGKSANKNKKLENKQKGKRKLNGGSDEASDVKRKRDGDQELPVKEKDGGSSGVKRAHTEEETELTENKKQRVEAAGTAQSASTEACTLFVSNLDFKVDEDKLRQELSKYGDIVEMRLRSGVKSFGGSICYCQYKTADSVEEALKHDRTPLDGRPMFLSRYSADKSKATFKYATTMEKNKLFVTGLPYSRCNKECLTEIFEKYGKLKDIRVVTFKDGKPKGLAYVDYEDEDSAARAIAATNGTTVGDRKIEVAISQPPPRAARPTPASRPPAAGMRRTQLSFLPRVLQQASTSKESSTNSHANGTEKRPLSNSDFKKMIASSSSSHDN

Uniprot

H9JTV5   A0A212FMM2   A0A194Q001   A0A194R1Z0   A0A0P6IFE8   A0A0P5SLV3   + More
A0A0P5S9I1   A0A0N8E0S2   A0A0P6BI09   A0A0C9PZL2   A0A0P4ZG75   A0A2P8YHL8   J9JRG0   A0A2S2PB20   A0A2S2QIL8   A0A182WRR3   A0A182LG21   A0ND71   Q16NI5   A0A182HU15   A0A182VKR9   A0A182NDX2   E2AEC8   A0A182P6M7   A0A182M2X6   A0A2H8U214   A0A182TTA7   A0A1S3F293   A0A1Q3EWF4   A0A182JYB4   A0A182QHB1   A0A2M4BCW7   A0A2M4BCW9   A0A2M3Z7K6   A0A2M4BD54   A0A2M3Z7T4   A0A182FPG4   A0A2M4AE49   A0A0A1XP93   A0A2M4AE37   W5JK77   A0A0A1WXT9   A0A2M4AE83   A0A1J1J8R3   A0A3B4ZYW4   A0A3Q1D6P6   A0A2U4CKK2   A0A3B3CZ66   A0A1S4G755   A0A182RNB7   A0A182VYK3   A0A3Q1B9Z2   H0Z981   A0A182XWC3   A0A2Y9FB44   A0A3Q7QHD7   G1PAD3   A0A3B5A219   U3K2N9   A0A3Q7SKI9   H0WHI7   A0A3L8SCC7   A0A2U4CKK3   A0A0P5ST69   Q16NI3   A0A218V5A0   A0A2K6ATC5   A0A2K5WYB8   F7H2Z6   A0A096N4C5   A0A3Q7QGZ4   A0A2K5YX11   A0A2U3X287   A0A2K5NJF5   A0A091ENF2   A0A340WL08   G1MD89   A0A2Y9F9B7   H2Q6T4   A0A2K5H739   A0A1V4JTC8   A0A3Q7RJK1   A0A2R9C8C5   F7C5B3   A0A2I0M8B6   K9IPK9   E2QXZ2   L5LZJ7   G7PI53   A0A0D9S2R8   H9ERJ3   A0A2U3X280   A0A437D099  

Pubmed

19121390    22118469    26354079    29403074    20966253    12364791    + More
14747013    17210077    17510324    20798317    25830018    20920257    23761445    29451363    20360741    25244985    21993624    30282656    17431167    20010809    16136131    22722832    23371554    16341006    22002653    25319552   

EMBL

BABH01003662    AGBW02007651    OWR54940.1    KQ459582    KPI98907.1    KQ460878    + More
KPJ11539.1    GDIQ01005327    JAN89410.1    GDIP01141636    LRGB01000944    JAL62078.1    KZS14538.1    GDIP01142680    JAL61034.1    GDIQ01073092    JAN21645.1    GDIP01014264    JAM89451.1    GBYB01006998    JAG76765.1    GDIP01213229    JAJ10173.1    PYGN01000588    PSN43747.1    ABLF02015069    ABLF02015070    ABLF02015073    GGMR01013965    MBY26584.1    GGMS01008340    MBY77543.1    AAAB01008859    EAU77058.3    CH477823    EAT35909.1    APCN01000599    GL438827    EFN68361.1    AXCM01005292    GFXV01007713    MBW19518.1    GFDL01015410    JAV19635.1    AXCN02001589    GGFJ01001749    MBW50890.1    GGFJ01001748    MBW50889.1    GGFM01003743    MBW24494.1    GGFJ01001750    MBW50891.1    GGFM01003747    MBW24498.1    GGFK01005740    MBW39061.1    GBXI01001108    JAD13184.1    GGFK01005732    MBW39053.1    ADMH02001267    ETN63295.1    GBXI01010423    JAD03869.1    GGFK01005739    MBW39060.1    CVRI01000070    CRL07305.1    ABQF01028936    ABQF01028937    ABQF01028938    AAPE02036205    AGTO01020434    AAQR03070029    AAQR03070030    AAQR03070031    AAQR03070032    AAQR03070033    QUSF01000030    RLV99915.1    GDIP01135628    JAL68086.1    EAT35911.1    MUZQ01000045    OWK61146.1    AQIA01012596    AQIA01012597    AQIA01012598    JSUE03007704    AHZZ02002934    KK718897    KFO59463.1    ACTA01195906    AACZ04070370    LSYS01006629    OPJ74967.1    AJFE02116941    AJFE02116942    AKCR02000030    PKK25915.1    GABZ01004088    JAA49437.1    AAEX03014754    KB106121    ELK31467.1    CM001286    EHH66680.1    AQIB01025165    AQIB01025166    AQIB01025167    JU321246    JV048821    CM001259    AFE65002.1    AFI38892.1    EHH27376.1    CM012445    RVE68294.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000076858    UP000245037    + More
UP000007819    UP000076407    UP000075882    UP000007062    UP000008820    UP000075840    UP000075903    UP000075884    UP000000311    UP000075885    UP000075883    UP000075902    UP000081671    UP000075881    UP000075886    UP000069272    UP000000673    UP000183832    UP000261400    UP000257160    UP000245320    UP000261560    UP000075900    UP000075920    UP000007754    UP000076408    UP000248484    UP000286641    UP000001074    UP000016665    UP000286640    UP000005225    UP000276834    UP000197619    UP000233120    UP000233100    UP000006718    UP000028761    UP000233140    UP000245340    UP000233060    UP000052976    UP000265300    UP000008912    UP000002277    UP000233080    UP000190648    UP000240080    UP000008225    UP000053872    UP000002254    UP000009130    UP000029965   

PRIDE

H9JTV5   

Pfam

PF00076   RRM_1        + More
PF05391   Lsm_interact

Interpro

IPR035979   RBD_domain_sf        + More
IPR011990   TPR-like_helical_dom_sf       
IPR003954   RRM_dom_euk       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR000504   RRM_dom       
IPR003107   HAT       
IPR034217   SART3_RRM1       
IPR008669   LSM_interact       
IPR013212   Mad3/Bub1_I       
IPR034218   SART3_RRM2       

SUPFAM

SSF54928   SSF54928        + More
SSF48452   SSF48452       

Gene 3D

1.25.40.10     3.30.70.330    

CDD

cd12391  RRM1_SART3
cd12392  RRM2_SART3

ProteinModelPortal

H9JTV5   A0A212FMM2   A0A194Q001   A0A194R1Z0   A0A0P6IFE8   A0A0P5SLV3   + More
A0A0P5S9I1   A0A0N8E0S2   A0A0P6BI09   A0A0C9PZL2   A0A0P4ZG75   A0A2P8YHL8   J9JRG0   A0A2S2PB20   A0A2S2QIL8   A0A182WRR3   A0A182LG21   A0ND71   Q16NI5   A0A182HU15   A0A182VKR9   A0A182NDX2   E2AEC8   A0A182P6M7   A0A182M2X6   A0A2H8U214   A0A182TTA7   A0A1S3F293   A0A1Q3EWF4   A0A182JYB4   A0A182QHB1   A0A2M4BCW7   A0A2M4BCW9   A0A2M3Z7K6   A0A2M4BD54   A0A2M3Z7T4   A0A182FPG4   A0A2M4AE49   A0A0A1XP93   A0A2M4AE37   W5JK77   A0A0A1WXT9   A0A2M4AE83   A0A1J1J8R3   A0A3B4ZYW4   A0A3Q1D6P6   A0A2U4CKK2   A0A3B3CZ66   A0A1S4G755   A0A182RNB7   A0A182VYK3   A0A3Q1B9Z2   H0Z981   A0A182XWC3   A0A2Y9FB44   A0A3Q7QHD7   G1PAD3   A0A3B5A219   U3K2N9   A0A3Q7SKI9   H0WHI7   A0A3L8SCC7   A0A2U4CKK3   A0A0P5ST69   Q16NI3   A0A218V5A0   A0A2K6ATC5   A0A2K5WYB8   F7H2Z6   A0A096N4C5   A0A3Q7QGZ4   A0A2K5YX11   A0A2U3X287   A0A2K5NJF5   A0A091ENF2   A0A340WL08   G1MD89   A0A2Y9F9B7   H2Q6T4   A0A2K5H739   A0A1V4JTC8   A0A3Q7RJK1   A0A2R9C8C5   F7C5B3   A0A2I0M8B6   K9IPK9   E2QXZ2   L5LZJ7   G7PI53   A0A0D9S2R8   H9ERJ3   A0A2U3X280   A0A437D099  

PDB

5JPZ     E-value=3.74384e-23,     Score=271

KEGG

101735655    K22611 squamous cell carcinoma antigen recognized by T-cells 3 | (RefSeq) squamous cell carcinoma an

GO

GO:0003723   GO:0006396   GO:0016021   GO:0048872   GO:0000902   GO:0015030   GO:0071425   GO:0061574   GO:0000398   GO:0008380   GO:0000381   GO:0005737   GO:0005654   GO:0005515   GO:0000166   GO:0003676   GO:0006413   GO:0031369   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

Length:

892

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0004

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00004

outside

1  -  892

 

 

Pi

171.078048

Theta

164.72258

Tajima's D

0.01467

CLR

340.840075

CSRT

0.371481425928704

Interpretation

Uncertain