SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09655
Pre Gene Modal
BGIBMGA012969
Annotation
PREDICTED:_exocyst_complex_component_8_[Papilio_machaon]
Full name
Proteasome endopeptidase complex      
Location in the cell
Nuclear   Reliability : 2.976
 

Sequence

CDS
ATGTCCGAGATAGATATGGATAAGTTTGCTGTCCCAGACTTCGTCCCCGAACGTTACGTAAAAGACCTCGCTAGATCCTGCGTCGGAGGGGAGGAGCTACAGCAACAGAAGGAGAAAATACAAAATTTAGCCGAAGAAACCGCAAGTGCCCTAAAGAAAAATGTCTACGAGAATTATATGCAGTTTATCGAGACTGCGACGGAGATATCCCACCTCGAAACAGAAATGTACAAGCTATCGCATTTGTTAAGCGAACAGCGTTCTGTGCTGACTGTGCTCTCCCACGCCTCAATCCTCGGTAACGAGAACGGTTTATCACGCGAGTCTCTTGATAATCACGACGTCGAGGCTGAGAGGGCAGAAGAGGAACGAAAAAATAAATTAAATCTCATTACAGAAAAGGTAGAATCATGCATGAATCTGTTAGATGTCCCAGACCGAACTCTGCTTCATGAAGGTGACTTGCTAGAAATAGATGCAGAAGAAAATACTGCATTACAAAGAATGCATGTATATTTATTTAATGACTGCCTTATGTTAACATCCTGGATTTCTAACAGACGTGGTCCAATGAGATATAAGTTTCAAGTGAGTTACCCAATAAAGAATTTAGCAGTGGTGAATGTAAGAGATTTAGGAACTGTGAAACAAGCATTTAAAGTGTTAGCCTTCCCAGACACCAGAGTATTTCAATGCAATAGTTTTGCGATAAAAAAAGATTGGCTAGACAAATTTGAGATAGCAAAAAAACTGTATATTGAAAAAGAAAATTCTAAACAGAAGAAAAAAGATAGTCAAGAAAAATCAAAATCTGAATCTATTGAATCACCGAGTCTGTCTGTGGAAGAGATGCCATCACCCCAAATTACACCATTGCCTGAGTGGTTGGCTGATGTTACTGAAGAGCTTGATGTTTTGATTGTGGAGAGACATTTTCAAAAGACCTATGAGTTGATGGTTTCAGCTCAAAAAGCTTTAAATACTGAAGATTTTAAAAACCATCCACAAAGGGTTGATATATTGAAAAAAATAGAACAGAAGCAAAAGAGTTTAATTGAAATATTATTGAAAGATTTAGATGTAACACATAATTGGAGTTTGCGAGGAGGTCTCCAATCAACTAGACAACCGGTACTGATACTCAATAAGTTTAATATGACCAGTCAGGCTTGTGACTTGTTTTTGACGATATGCAGTTACACAGTCAAAGTTCATGTGAAAAGGGTGCAACTGGAAGGGTCAATTAACACTTATGTCAAACAAGTGGGTGAAGTGTTTTTTTGCTCATTGAGTGATGCCTTAACAGAGTTTATTTCACTATTTCCTAAAAATAAAATAAGTGCTTTTATAGTCTGGGCTAGTCTGCAACTTAGGATATTGATGAGTCAGATTATAAAACAAGTGTTCACACCTCAGTGTGCATTAGATTCCGTTCAGGATTGTGTTGAGAGTCTAAGGGAACAATGTACATTGTTTTGTCAATTTGGTTTAGATTTAAGATTCCAGTTGAACAGTTGTTTGAGAACACCAATAATAAAAGCTTTGAGAGAATATAAAGAGAAGACTGTTGACTCTATGAAAAATAAAATCACTGAAGACAAATGGACTCCAGTGAATATGCACACCAAAGCAGGTGTCAATAAATTCCTGAAACAAATGGAAACTTTGGGCCTTATATTAGCTAAGTATGTAATTAATGAAACATGGGTAGATTTATCAAGTAGTACCATATGGTTTACAAAGTCTATTGTCACTATACAGAAAATAGGTCTCCAGTTAGTGAACAAAGATATGATGGATAACCTTGATGAATACATTTATACAATATTCAATTCATGGCTTGTCCTCGCATCAGTCAACGATATTAGTTATGCAAAGAAGAATTTCAAATTCATTTTAGAAACAGTGATGCCTTTAATGCTTAGATGTTATAAAGAAGAAGTTGGCTATGATAATGAGAAATTAGTAGCTTTGGCAAAGAACTATGGTGTCAGTATTACACCATCCAAAAACATCACAAAATACACAAGTAATGAATATTTATGA
Protein
MSEIDMDKFAVPDFVPERYVKDLARSCVGGEELQQQKEKIQNLAEETASALKKNVYENYMQFIETATEISHLETEMYKLSHLLSEQRSVLTVLSHASILGNENGLSRESLDNHDVEAERAEEERKNKLNLITEKVESCMNLLDVPDRTLLHEGDLLEIDAEENTALQRMHVYLFNDCLMLTSWISNRRGPMRYKFQVSYPIKNLAVVNVRDLGTVKQAFKVLAFPDTRVFQCNSFAIKKDWLDKFEIAKKLYIEKENSKQKKKDSQEKSKSESIESPSLSVEEMPSPQITPLPEWLADVTEELDVLIVERHFQKTYELMVSAQKALNTEDFKNHPQRVDILKKIEQKQKSLIEILLKDLDVTHNWSLRGGLQSTRQPVLILNKFNMTSQACDLFLTICSYTVKVHVKRVQLEGSINTYVKQVGEVFFCSLSDALTEFISLFPKNKISAFIVWASLQLRILMSQIIKQVFTPQCALDSVQDCVESLREQCTLFCQFGLDLRFQLNSCLRTPIIKALREYKEKTVDSMKNKITEDKWTPVNMHTKAGVNKFLKQMETLGLILAKYVINETWVDLSSSTIWFTKSIVTIQKIGLQLVNKDMMDNLDEYIYTIFNSWLVLASVNDISYAKKNFKFILETVMPLMLRCYKEEVGYDNEKLVALAKNYGVSITPSKNITKYTSNEYL

Summary

Catalytic Activity
Cleavage of peptide bonds with very broad specificity.
Similarity
Belongs to the peptidase T1A family.
EC Number
3.4.25.1
EMBL
BABH01003667    NWSH01000463    PCG76236.1    RSAL01000102    RVE47457.1    ODYU01003407    + More
SOQ42137.1    KQ460878    KPJ11536.1    KQ459582    KPI98910.1    JTDY01001675    KOB73188.1    GDQN01001712    JAT89342.1    AGBW02007651    OWR54943.1    KK852902    KDR14056.1    NEVH01013262    PNF29095.1    PNF29096.1    PNF29098.1    GEZM01085213    JAV60113.1    GECZ01022357    JAS47412.1    GEDC01012991    JAS24307.1    KQ971343    EFA04473.2    KQ435090    KZC14612.1    KQ414619    KOC67764.1    APGK01043869    KB741018    KB632152    ENN75228.1    ERL89141.1    GBGD01000722    JAC88167.1    KK107182    EZA55954.1    QOIP01000011    RLU17183.1    ACPB03000880    GECL01001994    JAP04130.1    KQ435784    KOX74557.1    GL762137    EFZ21925.1    ADTU01018781    GL451937    EFN78206.1    KQ761343    OAD57875.1    DS235111    EEB12116.1    GL436457    EFN71915.1    LBMM01003526    KMQ93418.1    GFXV01005727    MBW17532.1    ABLF02008446    KQ978881    KYN27739.1    GECU01033695    JAS74011.1    LJIG01009506    KRT82943.1    GBHO01012997    GBHO01012996    GBRD01004489    JAG30607.1    JAG30608.1    JAG61332.1    KZ288204    PBC33315.1    KQ978323    KYM95116.1    GL732541    EFX81943.1    GDIQ01248376    GDIP01064955    JAK03349.1    JAM38760.1    GDIP01109690    JAL94024.1    GDIP01044798    JAM58917.1    GDIQ01147464    JAL04262.1    GEBQ01027158    GEBQ01000003    JAT12819.1    JAT39974.1    GDIQ01196755    JAK54970.1    GDIQ01077186    JAN17551.1    GDIQ01089634    JAN05103.1    GDIQ01030259    JAN64478.1    GDIQ01089633    JAN05104.1    GDIQ01049366    JAN45371.1    GDIQ01038963    JAN55774.1    GDIQ01092083    JAL59643.1    GDIP01009426    JAM94289.1    GDIP01044797    LRGB01000248    JAM58918.1    KZS20069.1    GDIP01253719    JAI69682.1    GDIQ01023812    JAN70925.1    GDIQ01041860    JAN52877.1    GL887908    EGI69521.1    GDIP01098335    JAM05380.1    KQ976692    KYM77794.1    GDRN01042105    JAI67071.1    KQ981693    KYN37711.1    KQ982762    KYQ51029.1    JH431842    AHAT01008283    AERX01042016    BC134948    AAI34949.1    RJVU01038599    ROL46291.1    CABZ01042340    NEDP02005415    OWF41251.1   
Pfam
PF16528   Exo84_C        + More
PF10584   Proteasome_A_N
PF00227   Proteasome
Interpro
IPR032403   Exo84_C        + More
IPR016159   Cullin_repeat-like_dom_sf       
IPR033961   Exo84       
IPR011993   PH-like_dom_sf       
IPR001849   PH_domain       
IPR029055   Ntn_hydrolases_N       
IPR000426   Proteasome_asu_N       
IPR016050   Proteasome_bsu_CS       
IPR001353   Proteasome_sua/b       
IPR023332   Proteasome_alpha-type       
SUPFAM
SSF74788   SSF74788        + More
SSF56235   SSF56235       
Gene 3D
PDB
1ZC3     E-value=2.40939e-21,     Score=254

Ontologies

Topology

Length:
681
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.28386
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00059
outside
1  -  681
 
 

Population Genetic Test Statistics

Pi
212.128496
Theta
178.700372
Tajima's D
1.116735
CLR
0
CSRT
0.688815559222039
Interpretation
Uncertain
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