Gene

KWMTBOMO09653

Pre Gene Modal

BGIBMGA012971

Annotation

PREDICTED:_small_G_protein_signaling_modulator_2-like_isoform_X4_[Papilio_polytes]

Location

Bomo_Chr16(-):6247363-6309987      View in EpiBrowser

Full name

ATP-dependent DNA helicase      

Location in the cell

Nuclear   Reliability : 2.464

CDS

ATGCCGGCAGCTAATGCCCCCACGGACCCTGAAACAGAGCAGAAAGAACGACTTATAGCGGCTGTGAAGAAGGAAGTCAAGCAGCTGATGGAAGAGGCTGTTACGAGGAAATTTGTCCATGAAGATAGTGGTGGAGTGACAACGTTGTGTGGCGCCGTTGAAGCGTGCCTGGGTCAAGGGTTGCGACGAAGAGCTCTCGGTCTATTTAAGACCAGTTCAACGACAGCTTTGCTGCACAAAATTGCAAAGCATTGCCCCGAAGCTGCATTAGTATCAGCCCGGGTGCTTGCTGCCGAAGGAACGCCGGCAACAAGGTCCGCTTCCGGAGTGGAGAGGCGTCCATCAGCGCCACGACCTCCTCTTTGTAAGAGAGGAAGCGGTTCTCTACTCGCGCAATCTCCGCCACAGTCTAAATACCTCTGGATTCGTATAGCTCTATTCGAGAAGCAGCTGGCAAAAATCATTGAGCATTTAGTGACGAATGCTACTCGTTATTATGAACGTGATGCTCTAGTGGCCGACCCTGACTACGGCAGTATTCTTAGTTCACTGCTAGTAGGGCCATGCGCGCTAGAATATTCAAAGGCTAAACCACCGGTTACATTCTGGACCGATCCACCAGCTGATGAATTGGTTCAAAGACATCGTATGTCAGCGGGTACAACGACACCGCCTTCAGTTCGAAGACCGATTTTGAACTTTAAAAGGAGTCTAAATGCCTCGTCTGACGATAGTTCGTCAGTCAACACAGTTACGGGCAAGGGAACGACAAGTGCCAAAGATTACGTAGAAAGTTTACATCAGAATTCAACGGCTACGCTTCTATACGGAAAGAACAATGTTCGCGTACAGCCTAAAGACGCAGAGGAACCCATGGCAGGATATTTGAGCCTTCACCAGACGGCGGTTGGATTGGTGATTAAATGGACACCAAATCAGCTCATGAATGGTTACGCCGAAAGCGAGAGTGTTGACAAAAGTGTGTACTGGGCGATGTCACTGCAAGTGCAAGTGTGGGAGGTGGTATACGTGCACGTGCATCGGTCTCAAGGCAGCGACGCGCTCATACTTGTCGGCCAGGACGGAGTGCAGAGACCACCCATACACTTCCCGAAAGGAGGTCACTTGCTGTCTTTTTTGAGCAATCTAGAGACAGGTTTATTACCTCATGGTCAGCTAGATCCACCCCTATGGTCACAGAGAGGGGCTGGAAAAGTATTCGGTAGAGGAAAAAACCGGAGACGTCCTATGCCAAGTCTCTCCGAATGTGGCGAAAGTGACGAAGTGGACCAAGACGAGGCTGCCGGCGATTACGTGTTCCGTATTGTCAACAACGCTATAGCCGACAGAGAAGCAATGCGTCATTCTCTTCTAGAACGAGCAGTTCAGTCGCCTCCGCGCACTCCACGCCGGCCTCTAGCATCAACGTCTACTACTTCCTCTGATTCGTCAACAATGTCAGTCGATTGTCCACCTTCGGCTGGATTTAGTGGGCTTCCTCCGATAACACCAGCTCCACACCAGCCTGTTGAACAGACTGCGTCCATTGAACTGGTATGCAGTACGATGCGTAGACAGATAATATCGAGGGCGTTCTACGGTTGGCTCGCGTATTGCCGACACTTGTCCACTGTCAGAACCCATCTAAGCGGTCTCGTGCATCCCAATATAATTACGAAAGAAGGAGCAGACTCTGGTCTTACAGAAGAAATATGGCGTTCAATGACCGACGACAGTGGTACTGTAAATGACAAAAACGAAGTATACAGGCTGGTTTACTACGGTGGTGTTCAGCATGACATCAGAAAGGAAGTTTGGCCATATCTCCTTGGATATTATGAATTCGGTTCAACAACAGAACAAAGAATAGAACAGGATGCGTCTTGCCGTCGTCAGTACGAGACCACAATGTCGGAGTGGCTCTGTGTTGAAGCCATAGTGCGGCAGAAGGACAGAGAAGCCACGGCCGCTTCAATAGCGAGGCTCAGTGAAGCCTTGGGAAAACTGCCACCCGTGGAGAGTAATGGAGATTCTGGAGAGGTTTTCGAAGACGATTGCAGCGTCATATCAGACAACCCTCCAATTGTAACTCCAGAGCCTAGCGATAACGAACAAAGACGACCGGACAACAAACCTGTTCTGTCTCGAGCACCCAGCGTAGATGAGATTGACAATATCGATTTAGACTCGGAAGAGAAAGAGAAAGATGTTAAAGTTAACGGAGAGACTGACACGAGTGATACTAGAGAAATAGATAGTCTTAAAGACTTAGATGATGAAGATGACGATGTTCATTTAAAAAGCGTTGTGGAGAACCCGGATATGAGGCGAGAAAGTATAGCTGAAATAAAAAGACTGGCTGAAGGTATCGTTCAGAAAAGCGACGGAAGAGGATTACTTTGTAGCGTTGATAGTGCGAATGTGAACCTTAACGGCGTTGACCAAAGATCCTCTGTAGAGGAAAACGGTCCGAGTCCACAACAGCATACTAGCGTTATAGTTACTAATCCGTCTGTTGATCTAGTACCGTCGGGATCACCGGCTTCCGGTGGAACAACTGCTAATGTGAGCCCGTCTCGTAGTCCATTAGGAGTGGTACGAGAAGAATCTCAATCTGCTGGTGCATCATTTGACACTCTGGAACCAACGAGTGATCAACGTCCAGAGACCAGATCCAATTGCGTTTCACCTGCTAGTTCTAATGGTGGAGTTTATTCTAACGAGTTGGTTGAAAGCTTCGCTCTGAATCTCCATCGGATCGAGAAAGACGTTCAAAGATGTGACAGGAATTATCCGTTCTTTACTGATGAAAATCTTGATAAACTAAGAAATATTATGTGCACATACGTTTGGGAACACCTCGAAACTGGTTATATGCAGGGAATGTGTGACCTCGCTGCTCCGCTGCTGGTGATGATGAAGGAGGAAGCTTCAGCCCACGCACTGTTCACAAGGCTCATGGACCGAGCCAGGGATAATTTCCCTTCAGGGCAAGCCATGGACGCTCATTTTGCTGACATGAGGTCGTTAATCCAAATCTTGGACTGCGAGCTGTACGAACTGATGCACGCTCACGGGGATTACACACACTTCTACTTCTGCTATCGCTGGTTCCTATTAGACTTCAAAAGGGAAATGCTATATCAAGACGTGTTTGCGGCGTGGGAAATGATATGGGCTGCTCGTCACGTCGCCTCCGAGCATATGGTGCTGTTCATAGCGCTCGCTCTGCTCGAGACGTATCGCGATGTGATACTCGCGAACACAATGGATTTTACGGATATCATCAAATTCTTCAATGAGATGGCCGAACGTCACGACGCTTCCGCTGTTCTATCTCTAGCCAGAGACCTAGTCCTGCAAGTTCAGACTCTAATCGAGAACAAATAG

Protein

MPAANAPTDPETEQKERLIAAVKKEVKQLMEEAVTRKFVHEDSGGVTTLCGAVEACLGQGLRRRALGLFKTSSTTALLHKIAKHCPEAALVSARVLAAEGTPATRSASGVERRPSAPRPPLCKRGSGSLLAQSPPQSKYLWIRIALFEKQLAKIIEHLVTNATRYYERDALVADPDYGSILSSLLVGPCALEYSKAKPPVTFWTDPPADELVQRHRMSAGTTTPPSVRRPILNFKRSLNASSDDSSSVNTVTGKGTTSAKDYVESLHQNSTATLLYGKNNVRVQPKDAEEPMAGYLSLHQTAVGLVIKWTPNQLMNGYAESESVDKSVYWAMSLQVQVWEVVYVHVHRSQGSDALILVGQDGVQRPPIHFPKGGHLLSFLSNLETGLLPHGQLDPPLWSQRGAGKVFGRGKNRRRPMPSLSECGESDEVDQDEAAGDYVFRIVNNAIADREAMRHSLLERAVQSPPRTPRRPLASTSTTSSDSSTMSVDCPPSAGFSGLPPITPAPHQPVEQTASIELVCSTMRRQIISRAFYGWLAYCRHLSTVRTHLSGLVHPNIITKEGADSGLTEEIWRSMTDDSGTVNDKNEVYRLVYYGGVQHDIRKEVWPYLLGYYEFGSTTEQRIEQDASCRRQYETTMSEWLCVEAIVRQKDREATAASIARLSEALGKLPPVESNGDSGEVFEDDCSVISDNPPIVTPEPSDNEQRRPDNKPVLSRAPSVDEIDNIDLDSEEKEKDVKVNGETDTSDTREIDSLKDLDDEDDDVHLKSVVENPDMRRESIAEIKRLAEGIVQKSDGRGLLCSVDSANVNLNGVDQRSSVEENGPSPQQHTSVIVTNPSVDLVPSGSPASGGTTANVSPSRSPLGVVREESQSAGASFDTLEPTSDQRPETRSNCVSPASSNGGVYSNELVESFALNLHRIEKDVQRCDRNYPFFTDENLDKLRNIMCTYVWEHLETGYMQGMCDLAAPLLVMMKEEASAHALFTRLMDRARDNFPSGQAMDAHFADMRSLIQILDCELYELMHAHGDYTHFYFCYRWFLLDFKREMLYQDVFAAWEMIWAARHVASEHMVLFIALALLETYRDVILANTMDFTDIIKFFNEMAERHDASAVLSLARDLVLQVQTLIENK

Catalytic Activity

ATP + H2O = ADP + H(+) + phosphate

Cofactor

Mg(2+)

Similarity

Belongs to the helicase family.

Uniprot

H9JTV9   A0A437BAS2   A0A194Q005   A0A212FMJ1   A0A194R1Y5   A0A2A4K274   + More
A0A2A4K155   A0A2H1VIM7   A0A2H1VE06   A0A084VAK3   A0A182J5U5   A0A1S4N3C9   A0A182MPI1   E0W3Q7   A0A336LLF9   W8B011   X1WJA9   Q8IQ30   E1NZD0   A0A2S2Q3D9   A0A2H8TFH8   A0A2T7PE07   A0A341B397   A0A341B548   A0A091ER45   A0A093NR01   A0A1U7V1Z2   A0A091MS11   A0A3L8SBN6   K7GCK8   K7GCL5   A0A1S3WE58   A0A3M0JY23   A0A3B3CYA9   U3K1V7   A0A094K648   A0A3Q4B3Z4   A0A3B1KB40   A0A341B371   A0A3Q3ETD1   H0ZAZ2   A0A0P5TN43   A0A0P5X0B9   A0A226E6I6   A0A1D2NBK5  

EC Number

3.6.4.12

Pubmed

19121390    26354079    22118469    24438588    20566863    24495485    + More
10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    30282656    17381049    29451363    25329095    20360741    27289101   

EMBL

BABH01003670    RSAL01000102    RVE47455.1    KQ459582    KPI98912.1    AGBW02007651    + More
OWR54946.1    KQ460878    KPJ11534.1    NWSH01000252    PCG78004.1    PCG78005.1    ODYU01002776    SOQ40689.1    ODYU01002039    SOQ39047.1    ATLV01004128    KE524190    KFB34997.1    AAZO01007430    AXCM01007464    DS235882    EEB20263.1    UFQS01000045    UFQT01000045    SSW98424.1    SSX18810.1    GAMC01014693    JAB91862.1    ABLF02028172    ABLF02028173    ABLF02028174    ABLF02028176    ABLF02028178    ABLF02030878    ABLF02046579    AE014298    AAN09550.3    AHN59964.1    BT125679    ADN95587.1    GGMS01002519    MBY71722.1    GFXV01001024    MBW12829.1    PZQS01000004    PVD31649.1    KK718897    KFO59486.1    KL224689    KFW62572.1    KK836424    KFP80141.1    QUSF01000030    RLV99772.1    AGCU01134446    AGCU01134447    AGCU01134448    AGCU01134449    AGCU01134450    AGCU01134451    AGCU01134452    QRBI01000121    RMC05843.1    AGTO01020432    KL342336    KFZ53663.1    ABQF01029004    ABQF01029005    ABQF01029006    ABQF01029007    GDIP01124366    JAL79348.1    GDIP01079681    JAM24034.1    LNIX01000006    OXA52958.1    LJIJ01000103    ODN02621.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000007151    UP000053240    UP000218220    + More
UP000030765    UP000075880    UP000075883    UP000009046    UP000007819    UP000000803    UP000245119    UP000252040    UP000052976    UP000054081    UP000189704    UP000276834    UP000007267    UP000079721    UP000269221    UP000261560    UP000016665    UP000261620    UP000018467    UP000261660    UP000007754    UP000198287    UP000094527   

PRIDE

H9JTV9    Q8IQ30   

Pfam

PF12068   PH_RBD        + More
PF02759   RUN
PF00566   RabGAP-TBC
PF05970   PIF1

Interpro

IPR037745   SGSM1/2        + More
IPR021935   SGSM1/2_RBD       
IPR000195   Rab-GTPase-TBC_dom       
IPR037213   Run_dom_sf       
IPR035969   Rab-GTPase_TBC_sf       
IPR004012   Run_dom       
IPR010285   DNA_helicase_pif1-like       

SUPFAM

SSF47923   SSF47923        + More
SSF140741   SSF140741       

CDD

cd15784  PH_RUTBC

ProteinModelPortal

H9JTV9   A0A437BAS2   A0A194Q005   A0A212FMJ1   A0A194R1Y5   A0A2A4K274   + More
A0A2A4K155   A0A2H1VIM7   A0A2H1VE06   A0A084VAK3   A0A182J5U5   A0A1S4N3C9   A0A182MPI1   E0W3Q7   A0A336LLF9   W8B011   X1WJA9   Q8IQ30   E1NZD0   A0A2S2Q3D9   A0A2H8TFH8   A0A2T7PE07   A0A341B397   A0A341B548   A0A091ER45   A0A093NR01   A0A1U7V1Z2   A0A091MS11   A0A3L8SBN6   K7GCK8   K7GCL5   A0A1S3WE58   A0A3M0JY23   A0A3B3CYA9   U3K1V7   A0A094K648   A0A3Q4B3Z4   A0A3B1KB40   A0A341B371   A0A3Q3ETD1   H0ZAZ2   A0A0P5TN43   A0A0P5X0B9   A0A226E6I6   A0A1D2NBK5  

PDB

4QXA     E-value=6.77819e-46,     Score=468

KEGG

101739035    K21847 small G protein signaling modulator 1 | (RefSeq) small G protein signaling modulator 1-like

GO

GO:0005096   GO:0043087   GO:0016021   GO:0017137   GO:0005829   GO:0030659  

Length:

1129

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.23775

Exp number, first 60 AAs:

0.00375

Total prob of N-in:

0.00023

outside

1  -  1129

 

 

Pi

183.84666

Theta

167.138829

Tajima's D

0.41315

CLR

0.333005

CSRT

0.489275536223189

Interpretation

Uncertain