Gene

KWMTBOMO09652

Pre Gene Modal

BGIBMGA012867

Annotation

PREDICTED:_peptidoglycan-recognition_protein_LB-like_[Bombyx_mori]

Location

Bomo_Chr16(+):6230748-6237758      View in EpiBrowser

Full name

Peptidoglycan-recognition protein      

Location in the cell

Extracellular   Reliability : 1.071

CDS

ATGATCGCATTATTAATTTTATTTGGCATTATAAGTTCCTCTATCGGATACCCTTCAGTTGATAAAGCGGATCCATCGACAAACGACGTCACCACTTACGATTTTCGTTATGTGACGAGGGCAGAGTGGCAAGCAAAAACGCCAGTCCAGACGACACCTTTAAAAACTCCCGTGCCGTATGTCGTGATCCACCACACGTACATCCCGGGCGCCTGTCACACTAGAGAACAGTGCAGTAGCGCCATGAGGGGCATGCAGAATTATAGTATGATAGATAATAACTGGTGGGACATCGGGTACAATTTCGCAGTGGGAGGCGACGGTGTATATGAAGGCCGAGGATGGACCGATCGAGGGGCACATTCGCTACATTTCAATAATATCAGTATTGGAATATCTTTTATTGGAGACTACCGATTCACAGTTCCATCGGTGGAACAAATCGCAGCTGCTAAATCGCTGATTGCGACCGGAGTGGAACTCGGCTTCGTGAAACCGGCCCACAAGATTATCGGACACAGGCAGGTCAGGAGGACCGCCTGCCCCGGAGACGCTTTGTATGAGCTCATCAAAACTTGGGACAAGTATTCACCTTTCCCGGGTTCCATTGACGATCTAGATAACGTAGAGGAACTGAAGAAATACTGA

Protein

MIALLILFGIISSSIGYPSVDKADPSTNDVTTYDFRYVTRAEWQAKTPVQTTPLKTPVPYVVIHHTYIPGACHTREQCSSAMRGMQNYSMIDNNWWDIGYNFAVGGDGVYEGRGWTDRGAHSLHFNNISIGISFIGDYRFTVPSVEQIAAAKSLIATGVELGFVKPAHKIIGHRQVRRTACPGDALYELIKTWDKYSPFPGSIDDLDNVEELKKY

Similarity

Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family.

Feature

chain  Peptidoglycan-recognition protein

Uniprot

A7BIV1   W8R8R8   A0A2A4K1V5   A0A346RAC8   A0A2H1VU37   E7DN59   + More
A0A437BAM8   A0A194R163   A0A212FMI9   A0A194Q0S5   E7DN58   A0A194R2Q4   E7DN57   A0A0N1PHT4   A0A2A4K1S1   A0A0N1I4J1   A0A194PRQ4   A0A194Q679   I7FE39   A0A1E1WD69   A0A0K8TH54   A0A194Q1P4   A0A0N0PA57   A0A437BAT0   A0A194R6P0   A0A125S9Y3   V5GVK1   A0A2P8YB58   A0A1B6GU90   A0A346RAD1   A0A2H1VA87   A0A0A7DVU2   A0A2J7Q6X9   Q0KKW7   A0A2S1GUY3   B6RQQ1   A0A411IZR2   A0A411J001   A0A411IZU6   A0A1Y1LEP6   A0A346RAC9   D1KRK9   A0A1J0M178   A0A1Y1LES5   A0A212FMH5   A0A2P8YB57   A0A1Y1JSG0   A0A1I8QBA4   D2A6F2   A0A3S2L7J3   U4UXK7   A0A067QGE8   A0A1W4XVT8   A0A1W4XWP1   A0A1W4XLB6   A0A2S1UFA9   J3JTK0   A0A1V1G5N1   G8GBC2   A0A2A4K187   A0A0G3BE90   T1PIP5   A0A1I8NHG6   A0A0L0BUT1   A0A1E1W0W1   N6U014   A0A1J1HM36   A0A067QQY1   A0A0K0TN30   I7EUB7   A0A0A1WR50   A0A125S9Y4   A0A0M4EHG6   A0A0A1WUF7   A0A1B6JT27   A8D1K9   A0A1B6IUS5   Q0KKW6   A0A034WFW2   E5D601   A0A034WEC3   B4NAW7   Q9BLL2   A0A023EI58   F4MI27   A0A0Q9X525   U3Q0G7   A0A182GJG8   A0A336LPL3   A0A1W7R8P4   A0A182VW14   A0A1A9WJ21   M1FW43   A0A1A9UWD7   E1ZXY8   B4M5D1   A0A023ELI4   A0A0Q9WBE3   A0A1B6KAD9   A0A1A9YHU9  

Pubmed

17689997    29910977    21167833    26354079    22118469    23295246    + More
29403074    18925938    28004739    19909380    18362917    19820115    23537049    24845553    29715482    22516182    28410430    25218236    25315136    26108605    26168790    25830018    18194529    25348373    17994087    24945155    21569254    26483478    20798317   

EMBL

AB291943    BAF74637.1    KF985962    AHL58837.1    NWSH01000252    PCG78006.1    + More
MH200918    AXS59128.1    ODYU01004458    SOQ44347.1    HQ260966    ADU33187.1    RSAL01000102    RVE47454.1    KQ460878    KPJ11533.1    AGBW02007651    OWR54947.1    KQ459582    KPI98913.1    HQ260965    ADU33186.1    KPJ11530.1    HQ260964    ADU33185.1    KQ458412    KPJ05906.1    PCG78009.1    KPJ05907.1    KQ459595    KPI95992.1    KPI98915.1    JX082166    AFP23116.1    GDQN01006138    JAT84916.1    GBRD01001336    JAG64485.1    KPI98914.1    KQ458843    KPJ04889.1    RVE47453.1    KPJ11531.1    KT725232    AME17979.1    GALX01002754    JAB65712.1    PYGN01000736    PSN41492.1    GECZ01003856    JAS65913.1    MH200921    AXS59131.1    ODYU01001490    SOQ37763.1    KF986378    AIY24628.1    NEVH01017450    PNF24335.1    AB232693    BAF03520.1    MH078491    AWE05152.1    EU282122    ABZ80672.1    MH423627    QBC16601.1    MH423626    QBC16600.1    MH423628    QBC16602.1    GEZM01057719    JAV72122.1    MH200919    AXS59129.1    GQ293365    ACX49764.1    KX342009    APD13821.1    GEZM01057718    JAV72123.1    OWR54948.1    PSN41495.1    GEZM01102141    JAV51943.1    KQ971347    EFA05744.1    RVE47452.1    KB632404    ERL95020.1    KK853478    KDR07311.1    MG457266    AWI97805.1    BT126557    AEE61521.1    FX985469    BAX07476.1    JN120254    AER70118.1    PCG78007.1    KP455732    AKJ26282.1    KA647970    AFP62599.1    JRES01001304    KNC23748.1    GDQN01010451    JAT80603.1    APGK01054672    APGK01054673    KB741251    ENN71867.1    CVRI01000010    CRK88995.1    KDR07310.1    KR534884    AKR52932.1    JX082167    AFP23117.1    GBXI01013394    JAD00898.1    KT725233    AME17980.2    CP012526    ALC45808.1    GBXI01011810    JAD02482.1    GECU01005328    JAT02379.1    AJVK01004217    EU130784    ABV60369.1    GECU01017017    GECU01014564    JAS90689.1    JAS93142.1    AB232694    BAF03521.1    GAKP01006299    JAC52653.1    GU182906    ADR51144.1    GAKP01006300    JAC52652.1    CH964232    EDW80931.1    AB017519    BAB33294.1    GAPW01004525    JAC09073.1    EZ617708    ADH94601.1    KRF99362.1    KF282764    AGW80663.1    JXUM01068194    KQ562487    KXJ75805.1    UFQT01000042    SSX18731.1    GEHC01000124    JAV47521.1    JQ687224    AFV15800.1    GL435155    EFN73970.1    CH940652    EDW59842.1    GAPW01004489    JAC09109.1    KRF79105.1    GEBQ01031566    JAT08411.1   

Proteomes

UP000218220    UP000283053    UP000053240    UP000007151    UP000053268    UP000245037    + More
UP000235965    UP000095300    UP000007266    UP000030742    UP000027135    UP000192223    UP000095301    UP000037069    UP000019118    UP000183832    UP000092553    UP000092462    UP000007798    UP000069940    UP000249989    UP000075920    UP000091820    UP000078200    UP000000311    UP000008792    UP000092443   

PRIDE

G8GBC2    Q9BLL2   

Pfam

PF01510   Amidase_2        + More
PF02205   WH2

Interpro

IPR002502   Amidase_domain        + More
IPR006619   PGRP_domain_met/bac       
IPR015510   PGRP       
IPR036505   Amidase/PGRP_sf       
IPR017331   Peptidoglycan_recognition       
IPR003124   WH2_dom       

SUPFAM

SSF55846   SSF55846       

Gene 3D

3.40.80.10    

CDD

cd06583  PGRP

ProteinModelPortal

A7BIV1   W8R8R8   A0A2A4K1V5   A0A346RAC8   A0A2H1VU37   E7DN59   + More
A0A437BAM8   A0A194R163   A0A212FMI9   A0A194Q0S5   E7DN58   A0A194R2Q4   E7DN57   A0A0N1PHT4   A0A2A4K1S1   A0A0N1I4J1   A0A194PRQ4   A0A194Q679   I7FE39   A0A1E1WD69   A0A0K8TH54   A0A194Q1P4   A0A0N0PA57   A0A437BAT0   A0A194R6P0   A0A125S9Y3   V5GVK1   A0A2P8YB58   A0A1B6GU90   A0A346RAD1   A0A2H1VA87   A0A0A7DVU2   A0A2J7Q6X9   Q0KKW7   A0A2S1GUY3   B6RQQ1   A0A411IZR2   A0A411J001   A0A411IZU6   A0A1Y1LEP6   A0A346RAC9   D1KRK9   A0A1J0M178   A0A1Y1LES5   A0A212FMH5   A0A2P8YB57   A0A1Y1JSG0   A0A1I8QBA4   D2A6F2   A0A3S2L7J3   U4UXK7   A0A067QGE8   A0A1W4XVT8   A0A1W4XWP1   A0A1W4XLB6   A0A2S1UFA9   J3JTK0   A0A1V1G5N1   G8GBC2   A0A2A4K187   A0A0G3BE90   T1PIP5   A0A1I8NHG6   A0A0L0BUT1   A0A1E1W0W1   N6U014   A0A1J1HM36   A0A067QQY1   A0A0K0TN30   I7EUB7   A0A0A1WR50   A0A125S9Y4   A0A0M4EHG6   A0A0A1WUF7   A0A1B6JT27   A8D1K9   A0A1B6IUS5   Q0KKW6   A0A034WFW2   E5D601   A0A034WEC3   B4NAW7   Q9BLL2   A0A023EI58   F4MI27   A0A0Q9X525   U3Q0G7   A0A182GJG8   A0A336LPL3   A0A1W7R8P4   A0A182VW14   A0A1A9WJ21   M1FW43   A0A1A9UWD7   E1ZXY8   B4M5D1   A0A023ELI4   A0A0Q9WBE3   A0A1B6KAD9   A0A1A9YHU9  

PDB

1OHT     E-value=7.45699e-40,     Score=408

KEGG

101739182    K01446 peptidoglycan recognition protein | (RefSeq) peptidoglycan-recognition protein LB-like

GO

GO:0009253   GO:0008745   GO:0008270   GO:0042834   GO:0045087   GO:0016021   GO:0050830   GO:0032827   GO:0019730   GO:0016019   GO:0005615   GO:0003779   GO:0006413   GO:0031369   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR11022  

SignalP

Position:   1 - 16,         Likelihood:  0.971553

 

 

Length:

215

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10846

Exp number, first 60 AAs:

0.09418

Total prob of N-in:

0.01048

outside

1  -  215

 

 

Pi

161.304976

Theta

16.187048

Tajima's D

0.148144

CLR

1.432631

CSRT

0.409779511024449

Interpretation

Uncertain