Gene

KWMTBOMO09651

Pre Gene Modal

BGIBMGA012866

Annotation

peptidoglycan_recognition_protein_S6_precursor_[Bombyx_mori]

Location

Bomo_Chr16(+):6218138-6222852      View in EpiBrowser

Full name

Peptidoglycan-recognition protein      

Location in the cell

Cytoplasmic   Reliability : 1.541 Mitochondrial   Reliability : 1.113

CDS

ATGCAGAAATACCACAATTCCTTAGGCTGGGGTGACATTGGATACCATTTCTGCGTAGGCGGCGATGGGGTGGCGTACGAAGGCCGCGGGTGGAACGTCATAGGTATTCATGCTGGACCAGCCAATAAATTGAGCATCGGCATTTGCCTGATTGGAGATTGGAGAGTCGAGACACCTTCAGCTGAGCAGTTGGCTACGACAAAAAAGCTTCTGTCCACGGGAGTGGAAATGGGAGCTATTAGCTCCGATTACAAGCTAATAGGACACAATCAGGCTATGACGACAGAATGTCCGGGAGGAGCGCTGCTGGAAGAGGTTTCAACCTGGGATAATTATCATCCTGGACACGTTAATTTTAGAGAACTAAATAAACAGACAAAATTTTGA

Protein

MQKYHNSLGWGDIGYHFCVGGDGVAYEGRGWNVIGIHAGPANKLSIGICLIGDWRVETPSAEQLATTKKLLSTGVEMGAISSDYKLIGHNQAMTTECPGGALLEEVSTWDNYHPGHVNFRELNKQTKF

Similarity

Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family.

Feature

chain  Peptidoglycan-recognition protein

Uniprot

H9JTK4   Q9BLL2   A0A125S9Y4   Q0KKW6   I7EUB7   U3Q0G7   + More
A0A2A4K187   E5D601   A0A346RAC9   M1FW43   A0A194R1F7   A0A1E1WV23   Q0P6N3   A0A437BAT0   A0A194Q0S5   A0A0K8T929   A0A194R2Q4   W8R8R8   A0A2H1VU40   A0A212FMI9   A0A2A4K1V5   A0A194Q679   A0A437BAM8   A0A1I8NHG6   A0A2H1VU37   T1PIP5   A0A2J7Q6X9   A0A0N1PHT4   A0A1V1G5N1   E7DN58   A0A067QGE8   A0A0N1I4J1   A0A194PRQ4   A7BIV1   A0A1E1WN95   A0A2P8YB58   D2A6F2   A0A1E1W0W1   A0A2H1VA87   I7FE39   A0A2S1GUY3   A0A0K8TH54   A0A346RAC8   A0A1Y1LEP6   A0A3S2L7J3   E7DN59   E7DN57   A0A0L0BUT1   A0A1Y1LES5   A0A1Q3FPS8   A0A1Q3FPI9   B0WK57   A0A1Q3FR98   A0A1I8QBA4   A0A2M4C0C5   A0A2M4C085   A0A2M4BZP0   W8C339   A0A2A4K1S1   A0A182PRW2   A0A1Y1JSG0   A0A034VAP3   A0A0K8VL70   A0A0K8UF23   A0A2M3ZF75   A0A194R163   A0A0A1WR50   A8D1K9   W8BGX0   A0A125S9Y3   A0A336LPL3   A0A0A1WUF7   A0A182YHW5   A0A2M3YYC2   Q0KKW7   A0A2M3ZEZ7   A0A1A9WJ21   A8CWC6   A0A182K6B2   A0A182VM64   H2BNX3   F4MI27   A0A182FS37   A0A182GJG8   A0A0N0PA57   D1KRK9   A0A194Q1P4   T1E305   A0A3F2YX68   A0A182J427   A0A182U826   A0A182HKA8   A0A0Q9WBE3   A0A1J1HM36   A0A1S4FPG4   T1DIR6   A0A0N1PHM4   H2BNX2   A0A0P8XZ34   T1E2D8  

Pubmed

19121390    17689997    23295246    29910977    26354079    17074843    + More
22118469    25315136    28410430    21167833    24845553    29403074    18362917    19820115    28004739    26108605    24495485    25348373    25830018    18194529    25244985    22679875    21569254    26483478    19909380    24330624    17994087   

EMBL

BABH01003671    AB017519    BAB33294.1    KT725233    AME17980.2    AB232694    + More
BAF03521.1    JX082167    AFP23117.1    KF282764    AGW80663.1    NWSH01000252    PCG78007.1    GU182906    ADR51144.1    MH200919    AXS59129.1    JQ687224    AFV15800.1    KQ460878    KPJ11532.1    GDQN01000222    JAT90832.1    AM392402    CAL36191.1    RSAL01000102    RVE47453.1    KQ459582    KPI98913.1    GBRD01003774    JAG62047.1    KPJ11530.1    KF985962    AHL58837.1    ODYU01004458    SOQ44349.1    AGBW02007651    OWR54947.1    PCG78006.1    KPI98915.1    RVE47454.1    SOQ44347.1    KA647970    AFP62599.1    NEVH01017450    PNF24335.1    KQ458412    KPJ05906.1    FX985469    BAX07476.1    HQ260965    ADU33186.1    KK853478    KDR07311.1    KPJ05907.1    KQ459595    KPI95992.1    AB291943    BAF74637.1    GDQN01002723    JAT88331.1    PYGN01000736    PSN41492.1    KQ971347    EFA05744.1    GDQN01010451    JAT80603.1    ODYU01001490    SOQ37763.1    JX082166    AFP23116.1    MH078491    AWE05152.1    GBRD01001336    JAG64485.1    MH200918    AXS59128.1    GEZM01057719    JAV72122.1    RVE47452.1    HQ260966    ADU33187.1    HQ260964    ADU33185.1    JRES01001304    KNC23748.1    GEZM01057718    JAV72123.1    GFDL01005478    JAV29567.1    GFDL01005652    JAV29393.1    DS231968    EDS29631.1    GFDL01005049    JAV29996.1    GGFJ01009625    MBW58766.1    GGFJ01009410    MBW58551.1    GGFJ01009409    MBW58550.1    GAMC01010331    JAB96224.1    PCG78009.1    GEZM01102141    JAV51943.1    GAKP01019368    GAKP01019367    JAC39584.1    GDHF01033343    GDHF01012683    JAI18971.1    JAI39631.1    GDHF01027116    JAI25198.1    GGFM01006463    MBW27214.1    KPJ11533.1    GBXI01013394    JAD00898.1    AJVK01004217    EU130784    ABV60369.1    GAMC01010332    GAMC01010330    GAMC01010329    JAB96223.1    KT725232    AME17979.1    UFQT01000042    SSX18731.1    GBXI01011810    JAD02482.1    GGFM01000499    MBW21250.1    AB232693    BAF03520.1    GGFM01006328    MBW27079.1    AJWK01021784    AJWK01021785    EU124614    ABV60332.1    JF828728    AEX31479.1    EZ617708    ADH94601.1    JXUM01068194    KQ562487    KXJ75805.1    KQ458843    KPJ04889.1    GQ293365    ACX49764.1    KPI98914.1    GALA01000815    JAA94037.1    AXCN02001500    APCN01000824    CH940652    KRF79105.1    CVRI01000010    CRK88995.1    GALA01000816    JAA94036.1    KQ461189    KPJ07297.1    JF828727    AEX31478.1    CH902617    KPU80133.1    GALA01000814    JAA94038.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000283053    UP000053268    UP000007151    + More
UP000095301    UP000235965    UP000027135    UP000245037    UP000007266    UP000037069    UP000002320    UP000095300    UP000075885    UP000092462    UP000076408    UP000091820    UP000092461    UP000075881    UP000075903    UP000069272    UP000069940    UP000249989    UP000075886    UP000075880    UP000075902    UP000075840    UP000008792    UP000183832    UP000007801   

PRIDE

H9JTK4    Q9BLL2   

Pfam

PF01510   Amidase_2

Interpro

IPR002502   Amidase_domain        + More
IPR006619   PGRP_domain_met/bac       
IPR015510   PGRP       
IPR036505   Amidase/PGRP_sf       
IPR017331   Peptidoglycan_recognition       

SUPFAM

SSF55846   SSF55846       

Gene 3D

3.40.80.10    

CDD

cd06583  PGRP

ProteinModelPortal

H9JTK4   Q9BLL2   A0A125S9Y4   Q0KKW6   I7EUB7   U3Q0G7   + More
A0A2A4K187   E5D601   A0A346RAC9   M1FW43   A0A194R1F7   A0A1E1WV23   Q0P6N3   A0A437BAT0   A0A194Q0S5   A0A0K8T929   A0A194R2Q4   W8R8R8   A0A2H1VU40   A0A212FMI9   A0A2A4K1V5   A0A194Q679   A0A437BAM8   A0A1I8NHG6   A0A2H1VU37   T1PIP5   A0A2J7Q6X9   A0A0N1PHT4   A0A1V1G5N1   E7DN58   A0A067QGE8   A0A0N1I4J1   A0A194PRQ4   A7BIV1   A0A1E1WN95   A0A2P8YB58   D2A6F2   A0A1E1W0W1   A0A2H1VA87   I7FE39   A0A2S1GUY3   A0A0K8TH54   A0A346RAC8   A0A1Y1LEP6   A0A3S2L7J3   E7DN59   E7DN57   A0A0L0BUT1   A0A1Y1LES5   A0A1Q3FPS8   A0A1Q3FPI9   B0WK57   A0A1Q3FR98   A0A1I8QBA4   A0A2M4C0C5   A0A2M4C085   A0A2M4BZP0   W8C339   A0A2A4K1S1   A0A182PRW2   A0A1Y1JSG0   A0A034VAP3   A0A0K8VL70   A0A0K8UF23   A0A2M3ZF75   A0A194R163   A0A0A1WR50   A8D1K9   W8BGX0   A0A125S9Y3   A0A336LPL3   A0A0A1WUF7   A0A182YHW5   A0A2M3YYC2   Q0KKW7   A0A2M3ZEZ7   A0A1A9WJ21   A8CWC6   A0A182K6B2   A0A182VM64   H2BNX3   F4MI27   A0A182FS37   A0A182GJG8   A0A0N0PA57   D1KRK9   A0A194Q1P4   T1E305   A0A3F2YX68   A0A182J427   A0A182U826   A0A182HKA8   A0A0Q9WBE3   A0A1J1HM36   A0A1S4FPG4   T1DIR6   A0A0N1PHM4   H2BNX2   A0A0P8XZ34   T1E2D8  

PDB

1OHT     E-value=2.04004e-29,     Score=315

KEGG

692398    K01446 peptidoglycan recognition protein | (RefSeq) PGRP-S5, BmPGRP-S5, Btl-lp1; peptidoglycan recog

GO

GO:0008270   GO:0008745   GO:0009253   GO:0042834   GO:0045087   GO:0016021   GO:0050830   GO:0032827   GO:0019730   GO:0016019   GO:0005615   GO:0006413   GO:0031369   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR11022  

Length:

128

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0969399999999999

Exp number, first 60 AAs:

0.09659

Total prob of N-in:

0.33385

outside

1  -  128

 

 

Pi

130.834443

Theta

159.051096

Tajima's D

-0.632049

CLR

0.510125

CSRT

0.208589570521474

Interpretation

Uncertain