Gene

KWMTBOMO09649

Pre Gene Modal

BGIBMGA012864

Annotation

peptidoglycan_recognition_protein_precursor_[Bombyx_mori]

Location

Bomo_Chr16(+):6185568-6192367      View in EpiBrowser

Full name

Peptidoglycan-recognition protein      

Location in the cell

PlasmaMembrane   Reliability : 1.012

CDS

ATGGCTGTTCGACTTTTATTTATTACAATTAGCTTAATCTCGGCAGTGACTGCATTGCCTAGTCCAATAAAATTAGTTAGTGACTATTCCTTCCCCTTCGTAAGCCGAGAGGAATGGGGTGCAAGGCCACCAACAATGACATCACCACTCAAAGTCAGTCCAGTGCCCATAGTAGTGATTCACCACAGCTACATTCCCAAAATATGCTTAGTTCGAGCAGACTGTGAGAGAGATTTGCGTAATATGCAAAGAGTGCACCAAGTGACTAATGGCTGGGAAGATATTGGATATAGTTTCGCAGTCGGCGGTGAAGGAACTGTGTTCGAGGGCCGTGGCTGGAGTTCAATTGGTGCTCACGCGTTCGGCGTCAACACCCGAAGCATCGGAATCTTGTTGATTGGAGATTTTATTACTAATCAACCGCCCCAGGCGCAGCTACAATCTGTCAAGGACCTGATCGAGGCTGGTGTGAGGCTCGGTCACATCCGATCCGATTACAAACTCATCGGACACAGACAAGTCACTCCCACTGAATGCCCTGGACAGAGACTGTTTGATGAAATCTCAAAATGGGATCACTTTTCACTGAATTGGGATGATTAA

Protein

MAVRLLFITISLISAVTALPSPIKLVSDYSFPFVSREEWGARPPTMTSPLKVSPVPIVVIHHSYIPKICLVRADCERDLRNMQRVHQVTNGWEDIGYSFAVGGEGTVFEGRGWSSIGAHAFGVNTRSIGILLIGDFITNQPPQAQLQSVKDLIEAGVRLGHIRSDYKLIGHRQVTPTECPGQRLFDEISKWDHFSLNWDD

Similarity

Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family.

Feature

chain  Peptidoglycan-recognition protein

Uniprot

G8GBC2   I7FE39   A0A0K8TH54   Q0KKW7   A0A125S9Y3   A0A2S1GUY3   + More
D1KRK9   A0A2A4K1S1   A0A2H1VA87   E7DN57   A0A194Q1P4   A0A0N0PA57   A0A194R6P0   A0A194R2Q4   A0A194Q679   A0A2A4K1V5   A0A194PRQ4   A0A437BAM8   W8R8R8   A0A0N1PHT4   A0A0N1I4J1   E7DN58   E7DN59   A7BIV1   A0A346RAD1   D2A6F2   T1PIP5   A0A1I8NHG6   A0A212FMH5   A0A2H1VU37   A0A346RAC8   A0A3S2L7J3   A0A212FMI9   A0A194R163   A0A437BAT0   A0A1E1W0W1   A0A1J1HM36   I7EUB7   A0A1Y1JSG0   A0A0K0TN30   A0A0L0BUT1   A0A034VAP3   A0A2A4K187   A0A0K8UF23   A0A0K8VL70   A0A1E1WD69   A0A1L8E3Q3   A0A2S1UFA9   A0A1Q3FPI9   A0A194Q0S5   A0A1I8QBA4   A0A1Y1LEP6   A0A1Q3FPS8   B4NAW7   A8D1K9   A0A1Y1LES5   B6RQQ1   A0A411IZU6   A0A411J001   A0A1Q3FR98   A0A0Q9X525   A0A411IZR2   A0A0M4EHG6   A0A0A1WR50   A0A1W4XVT8   A0A1W4XLB6   A0A1W4XWP1   A0A0A1WUF7   B4KDZ3   A0A0Q9XDH5   W8C339   A0A182GJG8   A0A1J0M178   A0A3F2YX68   M1FW43   U4UXK7   U3Q0G7   A0A1W7R8P4   A0A023ELI4   W8BGX0   F4MI27   J3JTK0   Q0KKW6   A0A1S4FPG4   A0A023EI58   E5D601   A0A1A9UWD7   T1E303   A0A182YHW5   Q1HRH3   B4M5D1   A0A0Q9WBE3   A0A1A9YHU9   A0A182SIN9   A0A1W4W1D6   A0A0Q9WFB2   A0A2M3YYC2   A8CWC6   B3NZE4   A0A1W4WC29  

Pubmed

25218236    23295246    17689997    19909380    21167833    26354079    + More
29910977    18362917    19820115    25315136    22118469    28004739    26168790    26108605    25348373    29715482    17994087    18194529    18925938    25830018    24495485    26483478    23537049    24945155    21569254    22516182    24330624    25244985    17204158    17510324   

EMBL

JN120254    AER70118.1    JX082166    AFP23116.1    GBRD01001336    JAG64485.1    + More
AB232693    BAF03520.1    KT725232    AME17979.1    MH078491    AWE05152.1    GQ293365    ACX49764.1    NWSH01000252    PCG78009.1    ODYU01001490    SOQ37763.1    HQ260964    ADU33185.1    KQ459582    KPI98914.1    KQ458843    KPJ04889.1    KQ460878    KPJ11531.1    KPJ11530.1    KPI98915.1    PCG78006.1    KQ459595    KPI95992.1    RSAL01000102    RVE47454.1    KF985962    AHL58837.1    KQ458412    KPJ05906.1    KPJ05907.1    HQ260965    ADU33186.1    HQ260966    ADU33187.1    AB291943    BAF74637.1    MH200921    AXS59131.1    KQ971347    EFA05744.1    KA647970    AFP62599.1    AGBW02007651    OWR54948.1    ODYU01004458    SOQ44347.1    MH200918    AXS59128.1    RVE47452.1    OWR54947.1    KPJ11533.1    RVE47453.1    GDQN01010451    JAT80603.1    CVRI01000010    CRK88995.1    JX082167    AFP23117.1    GEZM01102141    JAV51943.1    KR534884    AKR52932.1    JRES01001304    KNC23748.1    GAKP01019368    GAKP01019367    JAC39584.1    PCG78007.1    GDHF01027116    JAI25198.1    GDHF01033343    GDHF01012683    JAI18971.1    JAI39631.1    GDQN01006138    JAT84916.1    GFDF01000959    JAV13125.1    MG457266    AWI97805.1    GFDL01005652    JAV29393.1    KPI98913.1    GEZM01057719    JAV72122.1    GFDL01005478    JAV29567.1    CH964232    EDW80931.1    AJVK01004217    EU130784    ABV60369.1    GEZM01057718    JAV72123.1    EU282122    ABZ80672.1    MH423628    QBC16602.1    MH423626    QBC16600.1    GFDL01005049    JAV29996.1    KRF99362.1    MH423627    QBC16601.1    CP012526    ALC45808.1    GBXI01013394    JAD00898.1    GBXI01011810    JAD02482.1    CH933806    EDW16014.1    KRG01864.1    GAMC01010331    JAB96224.1    JXUM01068194    KQ562487    KXJ75805.1    KX342009    APD13821.1    AXCN02001500    JQ687224    AFV15800.1    KB632404    ERL95020.1    KF282764    AGW80663.1    GEHC01000124    JAV47521.1    GAPW01004489    JAC09109.1    GAMC01010332    GAMC01010330    GAMC01010329    JAB96223.1    EZ617708    ADH94601.1    BT126557    AEE61521.1    AB232694    BAF03521.1    GAPW01004525    JAC09073.1    GU182906    ADR51144.1    GALA01000820    JAA94032.1    DQ440121    CH477643    ABF18154.1    EAT37875.1    CH940652    EDW59842.1    KRF79105.1    KRF79104.1    GGFM01000499    MBW21250.1    AJWK01021784    AJWK01021785    EU124614    ABV60332.1    CH954181    EDV49517.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000283053    UP000007266    UP000095301    + More
UP000007151    UP000183832    UP000037069    UP000095300    UP000007798    UP000092462    UP000092553    UP000192223    UP000009192    UP000069940    UP000249989    UP000075886    UP000030742    UP000078200    UP000076408    UP000008820    UP000008792    UP000092443    UP000075901    UP000192221    UP000092461    UP000008711   

PRIDE

G8GBC2   

Pfam

PF01510   Amidase_2

Interpro

IPR036505   Amidase/PGRP_sf        + More
IPR017331   Peptidoglycan_recognition       
IPR015510   PGRP       
IPR002502   Amidase_domain       
IPR006619   PGRP_domain_met/bac       

SUPFAM

SSF55846   SSF55846       

Gene 3D

3.40.80.10    

CDD

cd06583  PGRP

ProteinModelPortal

G8GBC2   I7FE39   A0A0K8TH54   Q0KKW7   A0A125S9Y3   A0A2S1GUY3   + More
D1KRK9   A0A2A4K1S1   A0A2H1VA87   E7DN57   A0A194Q1P4   A0A0N0PA57   A0A194R6P0   A0A194R2Q4   A0A194Q679   A0A2A4K1V5   A0A194PRQ4   A0A437BAM8   W8R8R8   A0A0N1PHT4   A0A0N1I4J1   E7DN58   E7DN59   A7BIV1   A0A346RAD1   D2A6F2   T1PIP5   A0A1I8NHG6   A0A212FMH5   A0A2H1VU37   A0A346RAC8   A0A3S2L7J3   A0A212FMI9   A0A194R163   A0A437BAT0   A0A1E1W0W1   A0A1J1HM36   I7EUB7   A0A1Y1JSG0   A0A0K0TN30   A0A0L0BUT1   A0A034VAP3   A0A2A4K187   A0A0K8UF23   A0A0K8VL70   A0A1E1WD69   A0A1L8E3Q3   A0A2S1UFA9   A0A1Q3FPI9   A0A194Q0S5   A0A1I8QBA4   A0A1Y1LEP6   A0A1Q3FPS8   B4NAW7   A8D1K9   A0A1Y1LES5   B6RQQ1   A0A411IZU6   A0A411J001   A0A1Q3FR98   A0A0Q9X525   A0A411IZR2   A0A0M4EHG6   A0A0A1WR50   A0A1W4XVT8   A0A1W4XLB6   A0A1W4XWP1   A0A0A1WUF7   B4KDZ3   A0A0Q9XDH5   W8C339   A0A182GJG8   A0A1J0M178   A0A3F2YX68   M1FW43   U4UXK7   U3Q0G7   A0A1W7R8P4   A0A023ELI4   W8BGX0   F4MI27   J3JTK0   Q0KKW6   A0A1S4FPG4   A0A023EI58   E5D601   A0A1A9UWD7   T1E303   A0A182YHW5   Q1HRH3   B4M5D1   A0A0Q9WBE3   A0A1A9YHU9   A0A182SIN9   A0A1W4W1D6   A0A0Q9WFB2   A0A2M3YYC2   A8CWC6   B3NZE4   A0A1W4WC29  

PDB

1OHT     E-value=2.32737e-46,     Score=464

KEGG

100862794    K01446 peptidoglycan recognition protein | (RefSeq) PGRP; peptidoglycan recognition protein

GO

GO:0042834   GO:0045087   GO:0008745   GO:0008270   GO:0009253   GO:0050830   GO:0032827   GO:0019730   GO:0016019   GO:0005615   GO:0016021   GO:0006413   GO:0031369   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR11022  

SignalP

Position:   1 - 18,         Likelihood:  0.979249

 

 

Length:

200

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

6.95223

Exp number, first 60 AAs:

6.75295

Total prob of N-in:

0.32108

outside

1  -  200

 

 

Pi

544.669341

Theta

207.018167

Tajima's D

0.627888

CLR

0.577583

CSRT

0.548972551372431

Interpretation

Uncertain