SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09645  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012861
Annotation
cuticular_protein_hypothetical_30_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.489 Nuclear   Reliability : 1.34
 

Sequence

CDS
ATGCAGTCTTTGGTTATCCTCGCAGCCACCCTCTGCCTCGCCCAGGCGTCCTACTACCTAGGCGCCCCGGCCCCCATCCAACTCAGCCCGGATGGTAAATACGTCCTCGACACCCCGGAAGTAGCCCACGCTAAGGCCGCCCATCTGGCCGCACACGCACAAGCCTCTACTTCTCATGGCGCATGGAGTCCCGGATACGGCGGATACGCATCTGACGCACACTACGGCGCTCCTGCTGCCGGTCTTTACAAGTACGGTCCCGCTCCCCTTGCTCATGACGGTCGTGTGATCGACACCCCCGAGGTAGCCCACCTGAAGGCGGCCCACAACGCTGCCCACGCGGCCGCCCACGCTAACGCTGCCCACGGCGCGCTCGCCCACGCCGGATCCTACGCACCCCTCGCGTACGCCTCAGCTCCCCTCGCCCACGGTGCCGGTTACGCTGCTGGTTACGGCAAATGGACTGGTCCCCAGGCTCACATTCAACTGACCCACGACGGCCAATACGTAGTCGACACCCCTGAGGTACAACACGCAAGAGCATCCCACTTGGCTCAATACCACGCTGCCGCCCACGCCGCCGCCGCTGCCCCCGAAGAGTCCTGGGCACCCCACGGCCACGGCTGGCACTGA
Protein
MQSLVILAATLCLAQASYYLGAPAPIQLSPDGKYVLDTPEVAHAKAAHLAAHAQASTSHGAWSPGYGGYASDAHYGAPAAGLYKYGPAPLAHDGRVIDTPEVAHLKAAHNAAHAAAHANAAHGALAHAGSYAPLAYASAPLAHGAGYAAGYGKWTGPQAHIQLTHDGQYVVDTPEVQHARASHLAQYHAAAHAAAAAPEESWAPHGHGWH

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.984330
 
 
Length:
210
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.43237
Exp number, first 60 AAs:
3.24912
Total prob of N-in:
0.16636
outside
1  -  210
 
 

Population Genetic Test Statistics

Pi
199.554824
Theta
187.268403
Tajima's D
0.168256
CLR
1.131564
CSRT
0.415829208539573
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 AAHIAAHAQAAHSAPAHAPQQHW 96.55 1e-12
28467696 WTESQWAQK 96.00 2e-11
28467696 ASHEIVVPGAR 100.00 0.002
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