Gene

KWMTBOMO09632

Pre Gene Modal

BGIBMGA012979

Annotation

PREDICTED:_alpha-tocopherol_transfer_protein-like_[Bombyx_mori]

Location

Bomo_Chr16(-):5799956-5819473      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.744

CDS

ATGGCGTTTTTGCAAGGGCCATCGCTAAAGCAGGCGGAAGTAATAAAGCAGGAGTTAGGGGAAGGACCAGGAGACTTAGAACGAGGAGTCAGGGACCTGCAGAATATGCTGGCAGCCACTCCTTACCTACCAGAACCAGAAACTGTTGACAAACATCTATTGGAGCTATTCGTCCGAGGATGTCGAATGGACTTGGATCGGGCTAGATCAAAACTGGAAGCATTTTGTATAGCTCGCAAACGTCATAGGGACCTCTACGAATACATATCTTTGAACGAACCTCCTCTCAACGATGTTTGTAAATTTTGTGACATCGCAACTCTTCCAAAACTGACCGATGAAGGTTTGAGAATAACTGTATTCATAATAAAGCCCGGATACCCCGAGAGTTCTGCTGATGTGACGGCAGCAGTTCGCGCCACATTACTCTTGAGCGACGCTCGTATGAAGGACGAAACACTTATAACCGGGGACGTGTTTATTTATGAGGTTTCAAAAGTTAGAGGATCACTAGTGGCTCGGGTCGCTGCCGCTGCCGGTGCAATCAGACGAGGCATCCAACTCGCACAGGCGGCTTACCCTCAGAGGCTCAAAAGGATCCACGTCGTTGGAGCACCGACGTTTCTGGCATCGTCTTTACAGCTCATGAGGAATTGCGTGAACGAGAAAATCAAGAGACGGTATTACTTACACGCAAAAGTAGAAGAATTGTTTGAGCACTTCCCTGCACGTGTGATCCCTGAAGAATGGGGCGGAGAGGAAGAATCAGTAGAAGCACTCGTCAAGAAATGGAGATGTCGCATTGATGAAAGTCGGGACTTCCTACGCAACCTCAACGAGATGGGGGCCAGTACTGCAAATGCATCGGTTCCTGATACCGACATTTATGGCACGGTCGGGGCATTTAGAAAATTAGAAATTGATTAA

Protein

MAFLQGPSLKQAEVIKQELGEGPGDLERGVRDLQNMLAATPYLPEPETVDKHLLELFVRGCRMDLDRARSKLEAFCIARKRHRDLYEYISLNEPPLNDVCKFCDIATLPKLTDEGLRITVFIIKPGYPESSADVTAAVRATLLLSDARMKDETLITGDVFIYEVSKVRGSLVARVAAAAGAIRRGIQLAQAAYPQRLKRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLHAKVEELFEHFPARVIPEEWGGEEESVEALVKKWRCRIDESRDFLRNLNEMGASTANASVPDTDIYGTVGAFRKLEID

Similarity

Belongs to the EMP24/GP25L family.

Uniprot

A0A0S2Z379   A0A2H1VN25   A0A0N0PDH0   A0A3B0EPX4   A0A194PZQ2   A0A2H4RMS5   + More
A0A212FML0   A0A2H4RMV5   A0A2H1VHD6   A0A2A4JBE5   A0A0L7LT44   A0A1B6FXQ2   A0A1W4WK00   A0A1B6LYR8   A0A1B6MTH0   A0A2P8YT90   A0A1B6J6Z5   A0A1L8DZ37   Q178U4   A0A182FNW7   A0A1B0DII6   Q178U5   A0A1B0CFJ4   F5HKV7   A0A1D6TJS6   A0A182HSP7   A0A182G0T6   A0A182UXR4   A0A182LER6   A0A182XAU9   Q7QCC6   A0A182HSP6   A0A182P062   A0A023EQY2   A0A182TL25   E2BJ28   W5JP64   A0A182YQJ3   A0A182JE45   A0A182VWX1   B0WR71   A0A336MFQ7   A0A182M982   A0A182RS71   A0A182JUT9   A0A182Q192   A0A1B6CMW7   B3P2D1   A0A212FBP0   A0A182NRL3   A0A1A9WST7   B4QWV4   B4I3Z9   A0A3L8E2J1   B4NF55   A0A1W4UK04   B4PV95   Q8I099   A0A0M4F3U1   B4KDP0   B3LZI5   B4M5F6   Q7JRE6   A0A232ELM6   K7ITZ4   B4JSM0   A0A0K8ULV3   A0A1I8PDS7   A0A1B0FPF0   A0A1A9Y8C9   A0A1A9VG35   A0A1B0BMS5   A0A1B0A681   A0A232FEM8   A0A0L0CDT5   E2A8W6   T1PM53   I4DIV6   A0A0N0BHJ4   A0A2A3EKL1   A0A3B0JQ82   I4DMP5   A0A026W000   A0A0A1WYR9   W8C4K4   K7IUB2   B4GF98   Q296E7   A0A087ZQ01   A0A0L7QV98   A0A2H4RMR9   A0A2J7Q755   A0A194PRZ7   A0A0C9QW57   D2A5R3   A0A2W1BQL9  

Pubmed

25684408    26354079    29136137    22118469    26227816    29403074    + More
17510324    12364791    26483478    20966253    14747013    17210077    24945155    20798317    20920257    23761445    25244985    17994087    30249741    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28648823    20075255    26108605    25315136    22651552    24508170    25830018    24495485    15632085    23185243    18362917    19820115    28756777   

EMBL

KT943546    ALQ33304.1    ODYU01003294    SOQ41862.1    KQ460208    KPJ16620.1    + More
RBVL01000287    RKO09695.1    KQ459582    KPI98801.1    MG434620    ATY51926.1    AGBW02007651    OWR54967.1    MG434658    ATY51964.1    ODYU01002390    SOQ39822.1    NWSH01002014    PCG69427.1    JTDY01000139    KOB78635.1    GECZ01014799    JAS54970.1    GEBQ01011182    JAT28795.1    GEBQ01000774    JAT39203.1    PYGN01000374    PSN47463.1    GECU01012767    JAS94939.1    GFDF01002388    JAV11696.1    CH477359    EAT42708.1    AJVK01062615    EAT42707.1    AJWK01010115    AAAB01008859    EGK96859.1    APCN01000318    JXUM01037643    KQ561136    KXJ79606.1    EAA08040.3    GAPW01002564    JAC11034.1    GL448558    EFN84178.1    ADMH02000502    ETN66182.1    DS232052    EDS33245.1    UFQT01000848    SSX27633.1    AXCM01007540    AXCN02000004    GEDC01022563    JAS14735.1    CH954181    EDV47881.1    AGBW02009293    OWR51150.1    CM000364    EDX11716.1    CH480821    EDW54942.1    QOIP01000001    RLU26595.1    CH964251    EDW83430.2    CM000160    EDW95764.1    AE014297    AAF52032.1    AAN13281.2    CP012526    ALC45945.1    CH933806    EDW13874.1    CH902617    EDV41927.1    CH940652    EDW59867.2    BT001686    AAN71441.1    NNAY01003544    OXU19231.1    CH916373    EDV94760.1    GDHF01024836    JAI27478.1    CCAG010002514    JXJN01017044    NNAY01000357    OXU28928.1    JRES01000531    KNC30401.1    GL437663    EFN70195.1    KA648973    AFP63602.1    AK401224    BAM17846.1    KQ435750    KOX76354.1    KZ288227    PBC31792.1    OUUW01000008    SPP84357.1    AK402563    BAM19185.1    KK107522    EZA49342.1    GBXI01010627    JAD03665.1    GAMC01005454    JAC01102.1    AAZX01010653    CH479182    EDW34283.1    CM000070    EAL28511.1    KRT00781.1    KQ414731    KOC62381.1    MG434623    ATY51929.1    NEVH01017447    PNF24414.1    KQ459601    KPI93910.1    GBYB01004902    JAG74669.1    KQ971345    EFA05407.1    KZ150073    PZC74013.1   

Proteomes

UP000053240    UP000276569    UP000053268    UP000007151    UP000218220    UP000037510    + More
UP000192223    UP000245037    UP000008820    UP000069272    UP000092462    UP000092461    UP000007062    UP000076407    UP000075840    UP000069940    UP000249989    UP000075903    UP000075882    UP000075885    UP000075902    UP000008237    UP000000673    UP000076408    UP000075880    UP000075920    UP000002320    UP000075883    UP000075900    UP000075881    UP000075886    UP000008711    UP000075884    UP000091820    UP000000304    UP000001292    UP000279307    UP000007798    UP000192221    UP000002282    UP000000803    UP000092553    UP000009192    UP000007801    UP000008792    UP000215335    UP000002358    UP000001070    UP000095300    UP000092444    UP000092443    UP000078200    UP000092460    UP000092445    UP000037069    UP000000311    UP000095301    UP000053105    UP000242457    UP000268350    UP000053097    UP000008744    UP000001819    UP000005203    UP000053825    UP000235965    UP000007266   

PRIDE

Q8I099   

Pfam

PF00650   CRAL_TRIO        + More
PF01105   EMP24_GP25L

Interpro

IPR036273   CRAL/TRIO_N_dom_sf        + More
IPR036865   CRAL-TRIO_dom_sf       
IPR001251   CRAL-TRIO_dom       
IPR036598   GOLD_dom_sf       
IPR015720   TMP21-related       
IPR009038   GOLD_dom       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       
SSF101576   SSF101576       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

A0A0S2Z379   A0A2H1VN25   A0A0N0PDH0   A0A3B0EPX4   A0A194PZQ2   A0A2H4RMS5   + More
A0A212FML0   A0A2H4RMV5   A0A2H1VHD6   A0A2A4JBE5   A0A0L7LT44   A0A1B6FXQ2   A0A1W4WK00   A0A1B6LYR8   A0A1B6MTH0   A0A2P8YT90   A0A1B6J6Z5   A0A1L8DZ37   Q178U4   A0A182FNW7   A0A1B0DII6   Q178U5   A0A1B0CFJ4   F5HKV7   A0A1D6TJS6   A0A182HSP7   A0A182G0T6   A0A182UXR4   A0A182LER6   A0A182XAU9   Q7QCC6   A0A182HSP6   A0A182P062   A0A023EQY2   A0A182TL25   E2BJ28   W5JP64   A0A182YQJ3   A0A182JE45   A0A182VWX1   B0WR71   A0A336MFQ7   A0A182M982   A0A182RS71   A0A182JUT9   A0A182Q192   A0A1B6CMW7   B3P2D1   A0A212FBP0   A0A182NRL3   A0A1A9WST7   B4QWV4   B4I3Z9   A0A3L8E2J1   B4NF55   A0A1W4UK04   B4PV95   Q8I099   A0A0M4F3U1   B4KDP0   B3LZI5   B4M5F6   Q7JRE6   A0A232ELM6   K7ITZ4   B4JSM0   A0A0K8ULV3   A0A1I8PDS7   A0A1B0FPF0   A0A1A9Y8C9   A0A1A9VG35   A0A1B0BMS5   A0A1B0A681   A0A232FEM8   A0A0L0CDT5   E2A8W6   T1PM53   I4DIV6   A0A0N0BHJ4   A0A2A3EKL1   A0A3B0JQ82   I4DMP5   A0A026W000   A0A0A1WYR9   W8C4K4   K7IUB2   B4GF98   Q296E7   A0A087ZQ01   A0A0L7QV98   A0A2H4RMR9   A0A2J7Q755   A0A194PRZ7   A0A0C9QW57   D2A5R3   A0A2W1BQL9  

PDB

5MUG     E-value=0.000173898,     Score=105

KEGG

101737212    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0016021   GO:0005215   GO:0005622   GO:0006810   GO:0006413   GO:0031369   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR22811  

Length:

308

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0749199999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00448

outside

1  -  308

 

 

Pi

211.979055

Theta

164.123905

Tajima's D

1.044718

CLR

0.20601

CSRT

0.668516574171291

Interpretation

Uncertain