Gene

KWMTBOMO09631  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012981

Annotation

PREDICTED:_transmembrane_emp24_domain-containing_protein_2_[Plutella_xylostella]

Location

Bomo_Chr16(-):5789950-5791833      View in EpiBrowser

Location in the cell

Golgi   Reliability : 0.999

CDS

ATGAAGTACTTAAGAATATCACAATGGCTGGTAGTAACTTTGTTAAACCTAGTTAGCAATGCGTACAGCTACACAGTCACAGTTGATGCACATGCCGAAGAGTGCTTTTACGAAAATGTAGAAGCCGATACCAAATTGGGATTATCGTTTGAAATAGCAGAAGGTGGTTTCTTAGATATTGATGTAATAATACTAGGCCCTGATGGCAACGTCATTCATAAAGCAGAGAGGGAGTCATCTGGTATTTATACATTTTCTGCTCCAACTGCAGGGAAGTATACTTATTGCTTCAGTAATAAAATGTCATCCATGACACCCAAGGTGGTAATGTTCAATCTTGAAATCGGAGAACCACAAACTAAATCTGGTAATGAAAATGAAGCTGACCATAATAAACTTGAGGACATGATCAAAGAACTTGCTACTACATTAAGAACTATCAAACACGATCAAGAGTATATGCAGGTGCGTGATCGTATCCATCGTTCAATAAATGAAAGTACAAATTCACGTGTGGTGATGTGGTCTATATTTGAGGCTTCAGTACTGCTTGTCATGACTATCGGACAAGTCTACTATCTCAAGAGGTTTTTTGAAGTGCAGCGTGTTGTGTAA

Protein

MKYLRISQWLVVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIAEGGFLDIDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSGNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEASVLLVMTIGQVYYLKRFFEVQRVV

Similarity

Belongs to the EMP24/GP25L family.

Uniprot

H9JTW9   A0A3S2PFZ2   A0A1E1WFV7   A0A2A4JCD8   I4DQB9   A0A2H1VM07   + More
S4PF60   A0A212FMJ3   A0A1E1W4S5   A0A2P8ZJP6   A0A1W7RAL9   A0A1B6F6W5   A0A1B6GNB0   A0A067R986   A0A0U2KD88   A0A0U2TJY2   A0A0N1IB37   A0A023EJL9   A0A182H3D7   A0A0L7LT44   A0A194Q5W7   A0A1B6ITM0   A0A1B6IGN3   D2A620   R4G3L5   A0A2P6KG86   A0A224XKY8   A0A1Y1LN93   R4WD76   A0A0T6AV60   E0VMZ0   A0A084VZT3   V5H1B3   Q17PZ5   A0A087TZQ6   A0A2I9LNU4   A0A2L2XYU8   A0A182J0L2   A0A310SSV9   U5EN48   A0A1Q3FH02   B0W0R2   V5GJ16   B7P454   A0A2R7WJV3   T1DH14   A0A182R2R3   E2J7F2   A0A1W4XF97   A0A3L8DPC1   A0A336KJ29   T1DGH9   A0A0P4WQR9   A0A1D2NGM5   A0A443S184   A0A182V8E3   A0A182WZW2   A0A182LI80   Q7Q2P1   A0A0A9X8W7   A0A2C9JWM8   A0A1S4EM42   A0A182QA57   A0A2A3EIF8   V9IJV4   A0A182NNB1   A0A293LZV1   A0A088ANQ5   A0A182YI32   A0A2R5LH39   A0A2M4DMU3   A0A2M4BZP4   A0A0J7KIQ0   A0A2M4A6K9   A0A2M3Z1U5   A0A2M4A6Q1   A0A3Q0JBT5   A0A0M8ZUZ0   A0A0P4VUB0   A0A182M1S0   A0A443QU55   H2L4A1   A0A182WAR2   A0A131YDH6   T1DSH8   A0A0K8RKV8   B4Q052   A0A224YJ85   A0A2M4A6R0   A0A023FU70   A0A2M4A6N0   A0A023FLT5   L7M3R3   A0A3B3CUN0   A0A3B4EAF4   A0A3B5AQB8   A0A1Z5L7L7   C3XVK2   A0A3B4CUJ6   A0A3Q2FKM5  

Pubmed

19121390    22651552    23622113    22118469    29403074    24845553    + More
26621068    26354079    24945155    26483478    26227816    18362917    19820115    28004739    23691247    20566863    24438588    17510324    29248469    26561354    25765539    24330624    30249741    27289101    20966253    12364791    14747013    17210077    25401762    26823975    15562597    25244985    27129103    17554307    26830274    17994087    17550304    28797301    25576852    29451363    28528879    18563158   

EMBL

BABH01003706    RSAL01000051    RVE50297.1    GDQN01005303    JAT85751.1    NWSH01002014    + More
PCG69426.1    AK404033    BAM20109.1    ODYU01003294    SOQ41861.1    GAIX01004197    JAA88363.1    AGBW02007651    OWR54968.1    GDQN01009090    JAT81964.1    PYGN01000035    PSN56727.1    GFAH01000206    JAV48183.1    GECZ01030778    GECZ01029835    GECZ01027371    GECZ01023829    JAS38991.1    JAS39934.1    JAS42398.1    JAS45940.1    GECZ01005847    JAS63922.1    KK852619    KDR20117.1    KT754656    ALS04490.1    KT754655    ALS04489.1    KQ460208    KPJ16619.1    GAPW01004408    JAC09190.1    JXUM01107202    KQ565122    KXJ71315.1    JTDY01000139    KOB78635.1    KQ459582    KPI98800.1    GECU01017473    JAS90233.1    GECU01021637    JAS86069.1    KQ971346    EFA05452.1    ACPB03016783    GAHY01001571    JAA75939.1    MWRG01012803    PRD25338.1    GFTR01003299    JAW13127.1    GEZM01054794    JAV73395.1    AK417289    BAN20504.1    LJIG01022739    KRT78968.1    DS235331    EEB14746.1    ATLV01018955    KE525256    KFB43477.1    GALX01000459    JAB68007.1    CH477188    EAT48799.1    KK117483    KFM70595.1    GFWZ01000069    MBW20059.1    IAAA01002445    IAAA01002446    IAAA01002447    IAAA01002448    LAA01139.1    KQ759767    OAD62970.1    GANO01000736    JAB59135.1    GFDL01008233    JAV26812.1    DS231818    EDS41364.1    GANP01014203    JAB70265.1    ABJB010117407    ABJB010202210    ABJB010443841    ABJB010759580    DS633434    EEC01376.1    KK854955    PTY19926.1    GALA01001451    JAA93401.1    HP429370    ADN29870.1    QOIP01000006    RLU21729.1    UFQS01000429    UFQT01000429    SSX03868.1    SSX24233.1    GALA01000182    JAA94670.1    GDRN01047481    JAI66721.1    LJIJ01000045    ODN04397.1    NCKV01013088    RWS21243.1    AAAB01008968    EAA13243.3    GBHO01028346    GBRD01008353    GDHC01002739    JAG15258.1    JAG57468.1    JAQ15890.1    AXCN02001904    KZ288254    PBC30781.1    JR048037    AEY60564.1    GFWV01008569    MAA33298.1    GGLE01004714    MBY08840.1    GGFL01014699    MBW78877.1    GGFJ01009394    MBW58535.1    LBMM01007061    KMQ90076.1    GGFK01003115    MBW36436.1    GGFM01001720    MBW22471.1    GGFK01003114    MBW36435.1    KQ435833    KOX71665.1    GDKW01002181    JAI54414.1    AXCM01000075    NCKU01004043    RWS06531.1    GEDV01012047    JAP76510.1    GAMD01000175    JAB01416.1    GADI01002081    JAA71727.1    CM000162    EDX01204.1    GFPF01006561    MAA17707.1    GGFK01003124    MBW36445.1    GBBL01001954    JAC25366.1    GGFK01003123    MBW36444.1    GBBK01001920    JAC22562.1    GACK01006068    JAA58966.1    GFJQ02003710    JAW03260.1    GG666468    EEN68128.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000007151    UP000245037    UP000027135    + More
UP000053240    UP000069940    UP000249989    UP000037510    UP000053268    UP000007266    UP000015103    UP000009046    UP000030765    UP000008820    UP000054359    UP000075880    UP000002320    UP000001555    UP000075900    UP000192223    UP000279307    UP000094527    UP000288716    UP000075903    UP000076407    UP000075882    UP000007062    UP000076420    UP000079169    UP000075886    UP000242457    UP000075884    UP000005203    UP000076408    UP000036403    UP000053105    UP000075883    UP000285301    UP000001038    UP000075920    UP000002282    UP000261560    UP000261440    UP000261400    UP000001554    UP000265020   

PRIDE

H9JTW9   

Pfam

PF01105   EMP24_GP25L        + More
PF00650   CRAL_TRIO

Interpro

IPR009038   GOLD_dom        + More
IPR015720   TMP21-related       
IPR036598   GOLD_dom_sf       
IPR001251   CRAL-TRIO_dom       
IPR036865   CRAL-TRIO_dom_sf       

SUPFAM

SSF101576   SSF101576        + More
SSF52087   SSF52087       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9JTW9   A0A3S2PFZ2   A0A1E1WFV7   A0A2A4JCD8   I4DQB9   A0A2H1VM07   + More
S4PF60   A0A212FMJ3   A0A1E1W4S5   A0A2P8ZJP6   A0A1W7RAL9   A0A1B6F6W5   A0A1B6GNB0   A0A067R986   A0A0U2KD88   A0A0U2TJY2   A0A0N1IB37   A0A023EJL9   A0A182H3D7   A0A0L7LT44   A0A194Q5W7   A0A1B6ITM0   A0A1B6IGN3   D2A620   R4G3L5   A0A2P6KG86   A0A224XKY8   A0A1Y1LN93   R4WD76   A0A0T6AV60   E0VMZ0   A0A084VZT3   V5H1B3   Q17PZ5   A0A087TZQ6   A0A2I9LNU4   A0A2L2XYU8   A0A182J0L2   A0A310SSV9   U5EN48   A0A1Q3FH02   B0W0R2   V5GJ16   B7P454   A0A2R7WJV3   T1DH14   A0A182R2R3   E2J7F2   A0A1W4XF97   A0A3L8DPC1   A0A336KJ29   T1DGH9   A0A0P4WQR9   A0A1D2NGM5   A0A443S184   A0A182V8E3   A0A182WZW2   A0A182LI80   Q7Q2P1   A0A0A9X8W7   A0A2C9JWM8   A0A1S4EM42   A0A182QA57   A0A2A3EIF8   V9IJV4   A0A182NNB1   A0A293LZV1   A0A088ANQ5   A0A182YI32   A0A2R5LH39   A0A2M4DMU3   A0A2M4BZP4   A0A0J7KIQ0   A0A2M4A6K9   A0A2M3Z1U5   A0A2M4A6Q1   A0A3Q0JBT5   A0A0M8ZUZ0   A0A0P4VUB0   A0A182M1S0   A0A443QU55   H2L4A1   A0A182WAR2   A0A131YDH6   T1DSH8   A0A0K8RKV8   B4Q052   A0A224YJ85   A0A2M4A6R0   A0A023FU70   A0A2M4A6N0   A0A023FLT5   L7M3R3   A0A3B3CUN0   A0A3B4EAF4   A0A3B5AQB8   A0A1Z5L7L7   C3XVK2   A0A3B4CUJ6   A0A3Q2FKM5  

PDB

5AZW     E-value=4.47408e-32,     Score=341

KEGG

101737070    K20347 p24 family protein beta-1 | (RefSeq) transmembrane emp24 domain-containing protein 2

GO

GO:0016021   GO:0007030   GO:0030134   GO:0005794   GO:0006888   GO:0005783   GO:0005793   GO:0006886   GO:0005737   GO:0048042   GO:0008565   GO:0035220   GO:0061355   GO:0006810   GO:0005524   GO:0006413   GO:0031369   GO:0003723   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR22811  

Subcellular location

Membrane  

SignalP

Position:   1 - 23,         Likelihood:  0.993835

 

 

Length:

204

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.87443

Exp number, first 60 AAs:

1.8979

Total prob of N-in:

0.66649

inside

1  -  171

TMhelix

172  -  194

outside

195  -  204

 

 

Pi

250.85373

Theta

221.642311

Tajima's D

0.332812

CLR

0.750596

CSRT

0.461376931153442

Interpretation

Uncertain