Gene

KWMTBOMO09622  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012852

Annotation

ubiquitin-conjugating_enzyme_E2L_[Bombyx_mori]

Location

Bomo_Chr16(+):5685774-5687144      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.8

CDS

ATGGCTGCAACGAGAAGACTACAAAAAGAACTTAATGACATCAGACAGTCTGGCCTGAAGTCTTTCAGAGACATACAGGTTGATGAGTCCAACATCTTAACATGGCAAGGTCTAATTGTTCCAGACAACCCACCTTACAACAAAGGTGCTTTCCGCATTGAGATTAACTTTCCAGCAGAATACCCATTCAAACCCCCGAAAATTAGTTTCAAAACAAAGATTTACCACCCTAACATTGATGAAAAGGGTCAGGTGTGCCTGCCCATCATTAGTGCAGAAAATTGGAAGCCTGCTACCAAGACTGATCAAGGTAAAGTAGTGATATGTTAG

Protein

MAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQGKVVIC

Similarity

Belongs to the ubiquitin-conjugating enzyme family.

Uniprot

A0A2A4K0G9   A0A0N0PDG7   A0A2H1V4K3   A0A0N1PID5   Q2Q469   A0A3S2M3U7   + More
A0A1E1WTW1   A0A222AJ94   A0A212FML9   S4PB26   A0A0L7LFX2   T1JMF0   A0A0N7ZC36   A0A2J7R8B3   A0A067RH55   D2A4Q0   A0A0P4W446   A0A0T6ASY8   A0A1W4W486   A0A1W7R9A8   E0VJA1   Q006M9   A0A1W4W464   A0A0S1SFM7   E0VJA2   A0A1Y1MP34   A0A1B6EFD1   A0A2P8Y1I1   A0A2H8TWD3   A0A2S2NVS3   C4WU23   A0A2R5LJP3   E9GYI0   A0A1B6GBN5   A0A1B6IHP8   E2A0N3   A0A293N272   A0A0P5GDP5   A0A1L8DSR8   A0A0P4VT13   R4G536   J3JWA9   A0A023F9V1   A0A0P5NSL6   A0A0P4YAD2   A0A0N0U783   A0A023GF43   A0A2A3ELL7   V9IHY4   A0A088A1Z8   A0A087SVQ4   A0A182K613   A0A023GEL9   G3MNN9   A0A232F9A4   A0A1E1X2E1   N6T237   A0A182I4V3   Q7QDD7   A0A023FGU4   A0A023FUK9   A0A3N0ZAP3   Q6IQK2   A0A182QR04   A0A2R8QI56   A0A182MNV2   A0A182W7Y8   T1K1E9   A0A182N8C8   A0A0J7K9N9   E2BU33   A0A026W746   A0A338P702   A0A182RS89   A0A411G755   A0A0P6DDW3   K7ITF6   A0A182FLX8   A0A2M3Z735   A0A2M4APJ1   W5JG93   Q4QR35   A0A443SVQ8   W5M253   A0A0P5VV70   A0A0N8CXE1   A0A2D0SQW3   A0A060XC88   A0A3P8ZDV6   E3TDH6   A0A3B1IER8   A0A3B4C5H1   A0A0P6I8V8   A0A023FEG4   A0A2R8MXP9   A0A3B3SSU9   A2BIR3   A0A3B4EBB3   C1C418   A0A182YDX1  

Pubmed

26354079    19121390    22118469    23622113    26227816    24845553    + More
18362917    19820115    20566863    15994770    28004739    29403074    21292972    20798317    27129103    22516182    25474469    22216098    28648823    28503490    23537049    12364791    14747013    17210077    23594743    24508170    30249741    19468303    21183079    20075255    20920257    23761445    27762356    24755649    25069045    20634964    25329095    29240929    25244985   

EMBL

NWSH01000320    PCG77506.1    KQ460208    KPJ16610.1    ODYU01000646    SOQ35771.1    + More
LADI01006439    KPJ20643.1    BABH01003715    DQ219874    DQ443271    ABB36655.1    ABF51360.1    RSAL01000051    RVE50289.1    GDQN01000575    JAT90479.1    KY609668    ASO76449.1    AGBW02007651    OWR54976.1    GAIX01006152    JAA86408.1    JTDY01001232    KOB74453.1    JH430359    GDRN01073652    JAI63352.1    NEVH01006723    PNF37074.1    KK852685    KDR18497.1    KQ971344    EFA05194.1    GDRN01073651    JAI63353.1    LJIG01022883    KRT78236.1    GFAH01000657    JAV47732.1    DS235221    EEB13457.1    DQ923722    ABI98678.1    KR908784    ALM09353.1    EEB13458.1    GEZM01028872    GEZM01028871    JAV86215.1    GEDC01000642    JAS36656.1    PYGN01001050    PSN38115.1    GFXV01006751    MBW18556.1    GGMR01008469    MBY21088.1    ABLF02036422    AK340875    BAH71393.1    GGLE01005421    MBY09547.1    GL732575    EFX75477.1    GECZ01009920    JAS59849.1    GECU01035826    GECU01025418    GECU01021258    JAS71880.1    JAS82288.1    JAS86448.1    GL435626    EFN72936.1    GFWV01022445    MAA47172.1    GDIQ01242417    JAK09308.1    GFDF01004572    JAV09512.1    GDKW01000863    JAI55732.1    ACPB03007718    GAHY01000830    JAA76680.1    BT127527    AEE62489.1    GBBI01000537    JAC18175.1    GDIQ01159842    JAK91883.1    GDIP01231253    JAI92148.1    KQ435716    KOX79044.1    GBBM01002921    JAC32497.1    KZ288215    PBC32618.1    JR045944    AEY60091.1    KK112177    KFM56943.1    GBBM01002922    JAC32496.1    JO843490    AEO35107.1    NNAY01000651    OXU27182.1    GFAC01005962    JAT93226.1    APGK01055160    APGK01055161    KB741261    ENN71563.1    APCN01008487    APCN01008488    APCN01008489    AAAB01008852    EAA07410.4    GBBK01004112    JAC20370.1    GBBL01002191    JAC25129.1    RJVU01003789    ROL55018.1    LO018559    BC071403    AAH71403.1    AXCN02002217    CU571089    AXCM01003961    CAEY01001352    LBMM01010965    KMQ87108.1    GL450575    EFN80807.1    KK107436    QOIP01000002    EZA50849.1    RLU25374.1    AC154667    MH365858    QBB01667.1    GDIQ01087920    JAN06817.1    AAZX01006541    GGFM01003592    MBW24343.1    GGFK01009395    MBW42716.1    ADMH02001606    ETN61834.1    BC097603    BC108747    CM004467    CM004466    AAH97603.1    AAI08748.1    OCT98296.1    OCU01903.1    NCKV01000117    RWS31608.1    AHAT01028670    GDIP01094869    JAM08846.1    GDIP01089519    JAM14196.1    FR905012    CDQ74929.1    GU588406    ADO28362.1    GDIQ01008942    JAN85795.1    GBBK01004091    JAC20391.1    BX957246    BT081597    ACO51728.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000005204    UP000283053    UP000007151    + More
UP000037510    UP000235965    UP000027135    UP000007266    UP000192223    UP000009046    UP000245037    UP000007819    UP000000305    UP000000311    UP000015103    UP000053105    UP000242457    UP000005203    UP000054359    UP000075881    UP000215335    UP000019118    UP000075840    UP000007062    UP000000437    UP000075886    UP000075883    UP000075920    UP000015104    UP000075884    UP000036403    UP000008237    UP000053097    UP000279307    UP000000589    UP000075900    UP000002358    UP000069272    UP000000673    UP000186698    UP000288716    UP000018468    UP000221080    UP000193380    UP000265140    UP000018467    UP000261440    UP000008225    UP000261540    UP000076408   

PRIDE

Q2Q469   

Pfam

PF00179   UQ_con        + More
PF01965   DJ-1_PfpI

Interpro

IPR023313   UBQ-conjugating_AS        + More
IPR000608   UBQ-conjugat_E2       
IPR016135   UBQ-conjugating_enzyme/RWD       
IPR029062   Class_I_gatase-like       
IPR002818   DJ-1/PfpI       
IPR006287   DJ-1       

SUPFAM

SSF54495   SSF54495        + More
SSF52317   SSF52317       

Gene 3D

3.10.110.10     3.40.50.880    

CDD

cd00195  UBCc

ProteinModelPortal

A0A2A4K0G9   A0A0N0PDG7   A0A2H1V4K3   A0A0N1PID5   Q2Q469   A0A3S2M3U7   + More
A0A1E1WTW1   A0A222AJ94   A0A212FML9   S4PB26   A0A0L7LFX2   T1JMF0   A0A0N7ZC36   A0A2J7R8B3   A0A067RH55   D2A4Q0   A0A0P4W446   A0A0T6ASY8   A0A1W4W486   A0A1W7R9A8   E0VJA1   Q006M9   A0A1W4W464   A0A0S1SFM7   E0VJA2   A0A1Y1MP34   A0A1B6EFD1   A0A2P8Y1I1   A0A2H8TWD3   A0A2S2NVS3   C4WU23   A0A2R5LJP3   E9GYI0   A0A1B6GBN5   A0A1B6IHP8   E2A0N3   A0A293N272   A0A0P5GDP5   A0A1L8DSR8   A0A0P4VT13   R4G536   J3JWA9   A0A023F9V1   A0A0P5NSL6   A0A0P4YAD2   A0A0N0U783   A0A023GF43   A0A2A3ELL7   V9IHY4   A0A088A1Z8   A0A087SVQ4   A0A182K613   A0A023GEL9   G3MNN9   A0A232F9A4   A0A1E1X2E1   N6T237   A0A182I4V3   Q7QDD7   A0A023FGU4   A0A023FUK9   A0A3N0ZAP3   Q6IQK2   A0A182QR04   A0A2R8QI56   A0A182MNV2   A0A182W7Y8   T1K1E9   A0A182N8C8   A0A0J7K9N9   E2BU33   A0A026W746   A0A338P702   A0A182RS89   A0A411G755   A0A0P6DDW3   K7ITF6   A0A182FLX8   A0A2M3Z735   A0A2M4APJ1   W5JG93   Q4QR35   A0A443SVQ8   W5M253   A0A0P5VV70   A0A0N8CXE1   A0A2D0SQW3   A0A060XC88   A0A3P8ZDV6   E3TDH6   A0A3B1IER8   A0A3B4C5H1   A0A0P6I8V8   A0A023FEG4   A0A2R8MXP9   A0A3B3SSU9   A2BIR3   A0A3B4EBB3   C1C418   A0A182YDX1  

PDB

4Q5H     E-value=1.10951e-47,     Score=472

KEGG

692788    K04552 ubiquitin-conjugating enzyme E2 L3 [EC:2.3.2.23] | (RefSeq) UBE2L; ubiquitin-conjugating enzy

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0005524   GO:0016740   GO:0031625   GO:0061631   GO:0006511   GO:0000151   GO:0016874  

Length:

109

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.59454

inside

1  -  109

 

 

Pi

227.264839

Theta

210.474158

Tajima's D

0.251156

CLR

1.213448

CSRT

0.43992800359982

Interpretation

Uncertain