Gene

KWMTBOMO09620  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012985

Annotation

PREDICTED:_synaptosomal-associated_protein_29_[Papilio_polytes]

Location

Bomo_Chr16(-):5672580-5673513      View in EpiBrowser

Full name

Metalloendopeptidase      

Location in the cell

Nuclear   Reliability : 3.989

CDS

ATGTCTGGGCATAAATATTTCACAAATCCGAACAACCTATTCGAAAATGACGACGTCGATGATAACGAATTTGTAGATCGCTTCCGGTCAAGAATACCTCAAACACAGCAAGCAAATAAGCCTTATGGAGGTCATATTGCAGAACTGGAACGTCAACGCCAAGCTATGATCCAAACACAAAGAGAAATCGAACAACGGACAATAGATTCATCAACGAGAAGTATCGGATTGCTTCGTGATTCTGAACAAATTGGTATTGCAACGGCCGAAGAGCTTTCCCGACAACGTGAACAGCTACAGAACACAGACAGGCGACTTGATGAGATTAACACCAATTTAAACTATAGTCAAAAACATTTAAATGGTATAAAGTCTGTATTTTATGGTCTGAAGAATTATATTTCCGGAAAAAGTGATCAAACACCATCTAAAAGTCCAGCGACCTCGAATGTACGTAATGCTGGTACAAGTAGTAGCAGGCTTGATGAAACCCTAGATAATATGTCTAGGAACGTTGAAGATCGCTTTGAGAGTCATCCCTCAGCACGCCTACATGGTTTGTCTCAAGAAAGCGCTAAGAGTCCTGAAACAGAAAACGAGAGAGTAAATAATATACTTGATTCGAACTTGGATGAAATGGTGCATGCTATATCCCGGCTCAAACATCTAGGAGTTGCACTTGGTGAAGAGATAGAACAGCAAAACAACCTCGTGGATACTATTCAAGACAAAGTTGAGATTGCAGATATCAAGATTGGTAAACAAAATAAACAAATGAATAAACTACTTGGGAAATAG

Protein

MSGHKYFTNPNNLFENDDVDDNEFVDRFRSRIPQTQQANKPYGGHIAELERQRQAMIQTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQREQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTPSKSPATSNVRNAGTSSSRLDETLDNMSRNVEDRFESHPSARLHGLSQESAKSPETENERVNNILDSNLDEMVHAISRLKHLGVALGEEIEQQNNLVDTIQDKVEIADIKIGKQNKQMNKLLGK

Cofactor

Zn(2+)

Uniprot

H9JTX3   A0A0N1IQC3   A0A0N0PDJ7   A0A0L7LS78   A0A437BIM7   A0A2A4K173   + More
A0A2H1V678   S4NT90   A0A212FMQ4   K7ITY9   A0A1L8DVG4   A0A1W4XC39   A0A2S2Q4S5   A0A067QZZ5   A0A0C9RI77   A0A139WGW0   A0A1B0DF30   A0A0L7QUS6   A0A0T6AU05   A0A158NIC9   A0A154P0L9   A0A0J7KNG6   F4W4X1   A0A151JTN5   A0A026VZM5   A0A1Y1L1E9   U5EUL8   A0A087ZPR7   A0A195ECY7   A0A0A1X8H4   A0A2A3EJ97   A0A0C9RR38   W8ASH7   A0A336LW88   A0A034WM11   A0A0K8UCI6   A0A310SH07   E2ADB4   A0A1B6FDK2   E2A8Q7   A0A1B6IWK0   Q5TVZ1   B4JVT4   A0A2H8TRX7   Q293G1   A0A1B6DEK8   B4GBK3   A0A1B6BXY5   A0A0M4EFD1   U4U1Z9   N6U936   A0A3R7LWE7   A0A3B0JTD2   B3ME87   A0A2R7VWG0   V5H2E0   B4KUD4   A0A1B6LSX0   C4WVS3   A0A151IDJ6   J3JWB3   A0A0L0CT18   A0A1A9Y0N0   B4MRC4   A0A1J1IA96   A0A1A9V8D2   A0A1B0BNK0   A0A151WN71   B4LIY7   A0A226E6A9   Q9W1I8   A0A1I8P4H6   B4I8U1   B4QB03   B4PA76   A0A1A9ZWC2   A0A1S4FM18   Q16WB7   A0A2J7Q775   B3NPT2   A0A1D2MYX0   A0A1W4UZD8   D3TQT2   A0A1Q3F6F4   A0A0A9WSU7   A0A146LGG4   A0A182GRW9   A0A0V0GEM8   A0A023F1X9   A0A0A9WQ46   A0A1B0G7Q3   A0A023EPS6   A0A1I8MK38   T1ID73   T1IR56   T1PGG2   A0A2P6KA79   A0A087UNQ6   A0A0N0U6B5   E0W3P7  

EC Number

3.4.24.-

Pubmed

19121390    26354079    26227816    23622113    22118469    20075255    + More
24845553    18362917    19820115    21347285    21719571    24508170    30249741    28004739    25830018    24495485    25348373    20798317    12364791    17994087    15632085    23537049    22516182    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17550304    17510324    27289101    20353571    25401762    26823975    26483478    25474469    24945155    25315136    20566863   

EMBL

BABH01003717    LADI01006439    KPJ20640.1    KQ460208    KPJ16607.1    JTDY01000205    + More
KOB78302.1    RSAL01000051    RVE50286.1    NWSH01000320    PCG77503.1    ODYU01000646    SOQ35774.1    GAIX01012281    JAA80279.1    AGBW02007651    OWR54979.1    GFDF01003667    JAV10417.1    GGMS01002989    MBY72192.1    KK853054    KDR12010.1    GBYB01006631    JAG76398.1    KQ971344    KYB27129.1    AJVK01058488    KQ414731    KOC62365.1    LJIG01022884    KRT78231.1    ADTU01016497    KQ434791    KZC05372.1    LBMM01005052    KMQ91857.1    GL887575    EGI70757.1    KQ981875    KYN33999.1    KK107536    QOIP01000008    EZA49207.1    RLU19393.1    GEZM01072729    JAV65426.1    GANO01001413    JAB58458.1    KQ979074    KYN23068.1    GBXI01007252    JAD07040.1    KZ288227    PBC31780.1    GBYB01011010    JAG80777.1    GAMC01014742    GAMC01014741    GAMC01014740    JAB91815.1    UFQS01000150    UFQT01000150    SSX00543.1    SSX20923.1    GAKP01002341    JAC56611.1    GDHF01027937    GDHF01010255    JAI24377.1    JAI42059.1    KQ769958    OAD52712.1    GL438737    EFN68575.1    GECZ01021499    JAS48270.1    GL437663    EFN70136.1    GECU01016401    JAS91305.1    AAAB01008816    EAL41600.3    CH916375    EDV98072.1    GFXV01004826    MBW16631.1    CM000071    EAL24650.1    GEDC01013218    JAS24080.1    CH479181    EDW31298.1    GEDC01031180    JAS06118.1    CP012524    ALC40885.1    KB632003    ERL87864.1    APGK01044225    KB741021    ENN75087.1    QCYY01003162    ROT64960.1    OUUW01000001    SPP75951.1    CH902619    EDV35482.1    KK854112    PTY11488.1    GALX01001473    JAB66993.1    CH933808    EDW10721.1    GEBQ01013240    JAT26737.1    ABLF02021375    AK341647    BAH71993.1    KQ977939    KYM98536.1    BT127531    AEE62493.1    JRES01000049    KNC34564.1    CH963850    EDW74663.1    CVRI01000047    CRK97205.1    JXJN01017416    KQ982934    KYQ49135.1    CH940648    EDW60437.1    LNIX01000006    OXA52979.1    AE013599    AY061069    AAF47071.1    AAL28617.1    CH480824    EDW57016.1    CM000362    CM002911    EDX08440.1    KMY96127.1    CM000158    EDW92402.1    CH477571    EAT38868.1    NEVH01017447    PNF24437.1    CH954179    EDV56873.1    LJIJ01000374    ODM98202.1    EZ423784    ADD20060.1    GFDL01011936    JAV23109.1    GBHO01034066    JAG09538.1    GDHC01012164    JAQ06465.1    JXUM01083455    KQ563378    KXJ73947.1    GECL01000333    JAP05791.1    GBBI01003666    JAC15046.1    GBHO01034063    JAG09541.1    CCAG010016890    GAPW01002066    JAC11532.1    ACPB03002836    AFFK01018464    KA647861    AFP62490.1    MWRG01018515    PRD23226.1    KK120763    KFM78995.1    KQ435746    KOX76544.1    DS235882    EEB20253.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000037510    UP000283053    UP000218220    + More
UP000007151    UP000002358    UP000192223    UP000027135    UP000007266    UP000092462    UP000053825    UP000005205    UP000076502    UP000036403    UP000007755    UP000078541    UP000053097    UP000279307    UP000005203    UP000078492    UP000242457    UP000000311    UP000007062    UP000001070    UP000001819    UP000008744    UP000092553    UP000030742    UP000019118    UP000283509    UP000268350    UP000007801    UP000009192    UP000007819    UP000078542    UP000037069    UP000092443    UP000007798    UP000183832    UP000078200    UP000092460    UP000075809    UP000008792    UP000198287    UP000000803    UP000095300    UP000001292    UP000000304    UP000002282    UP000092445    UP000008820    UP000235965    UP000008711    UP000094527    UP000192221    UP000069940    UP000249989    UP000092444    UP000095301    UP000015103    UP000054359    UP000053105    UP000009046   

PRIDE

H9JTX3    Q9W1I8   

Pfam

PF01400   Astacin        + More
PF07406   NICE-3
PF00106   adh_short
PF02036   SCP2

Interpro

IPR000727   T_SNARE_dom        + More
IPR010876   NICE-3_prd       
IPR001506   Peptidase_M12A       
IPR024079   MetalloPept_cat_dom_sf       
IPR006026   Peptidase_Metallo       
IPR034035   Astacin-like_dom       
IPR036527   SCP2_sterol-bd_dom_sf       
IPR002347   SDR_fam       
IPR036291   NAD(P)-bd_dom_sf       
IPR003033   SCP2_sterol-bd_dom       

SUPFAM

SSF51735   SSF51735        + More
SSF55718   SSF55718       

Gene 3D

3.40.390.10     3.30.1050.10    

CDD

cd04280  ZnMc_astacin_like

ProteinModelPortal

H9JTX3   A0A0N1IQC3   A0A0N0PDJ7   A0A0L7LS78   A0A437BIM7   A0A2A4K173   + More
A0A2H1V678   S4NT90   A0A212FMQ4   K7ITY9   A0A1L8DVG4   A0A1W4XC39   A0A2S2Q4S5   A0A067QZZ5   A0A0C9RI77   A0A139WGW0   A0A1B0DF30   A0A0L7QUS6   A0A0T6AU05   A0A158NIC9   A0A154P0L9   A0A0J7KNG6   F4W4X1   A0A151JTN5   A0A026VZM5   A0A1Y1L1E9   U5EUL8   A0A087ZPR7   A0A195ECY7   A0A0A1X8H4   A0A2A3EJ97   A0A0C9RR38   W8ASH7   A0A336LW88   A0A034WM11   A0A0K8UCI6   A0A310SH07   E2ADB4   A0A1B6FDK2   E2A8Q7   A0A1B6IWK0   Q5TVZ1   B4JVT4   A0A2H8TRX7   Q293G1   A0A1B6DEK8   B4GBK3   A0A1B6BXY5   A0A0M4EFD1   U4U1Z9   N6U936   A0A3R7LWE7   A0A3B0JTD2   B3ME87   A0A2R7VWG0   V5H2E0   B4KUD4   A0A1B6LSX0   C4WVS3   A0A151IDJ6   J3JWB3   A0A0L0CT18   A0A1A9Y0N0   B4MRC4   A0A1J1IA96   A0A1A9V8D2   A0A1B0BNK0   A0A151WN71   B4LIY7   A0A226E6A9   Q9W1I8   A0A1I8P4H6   B4I8U1   B4QB03   B4PA76   A0A1A9ZWC2   A0A1S4FM18   Q16WB7   A0A2J7Q775   B3NPT2   A0A1D2MYX0   A0A1W4UZD8   D3TQT2   A0A1Q3F6F4   A0A0A9WSU7   A0A146LGG4   A0A182GRW9   A0A0V0GEM8   A0A023F1X9   A0A0A9WQ46   A0A1B0G7Q3   A0A023EPS6   A0A1I8MK38   T1ID73   T1IR56   T1PGG2   A0A2P6KA79   A0A087UNQ6   A0A0N0U6B5   E0W3P7  

PDB

4WY4     E-value=8.07506e-08,     Score=133

KEGG

101738668    K08509 synaptosomal-associated protein 29 | (RefSeq) soluble NSF attachment protein 29

PATHWAY

04130    SNARE interactions in vesicular transport - Bombyx mori (domestic silkworm)
04140    Autophagy - animal - Bombyx mori (domestic silkworm)

GO

GO:0019905   GO:0031201   GO:0006906   GO:0098793   GO:0005886   GO:0005484   GO:0016082   GO:0031629   GO:0006887   GO:0097352   GO:0000149   GO:0007030   GO:1903531   GO:0030100   GO:0016021   GO:0004222   GO:0008270   GO:0016192   GO:0005515   GO:0005634   GO:0003676   GO:0016742   GO:0005737   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

Length:

265

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05048

outside

1  -  265

 

 

Pi

311.784685

Theta

240.415704

Tajima's D

0.933034

CLR

0.011804

CSRT

0.641317934103295

Interpretation

Possibly Positive selection