Gene

KWMTBOMO09616

Pre Gene Modal

BGIBMGA012849

Annotation

PREDICTED:_sodium_channel_protein_Nach-like_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr16(+):5651344-5655028      View in EpiBrowser

Full name

Pickpocket protein 28      

Location in the cell

Nuclear   Reliability : 2.306

CDS

ATGGATTTCCTTGGAGACCTAGAGATCCTCCTCCACAACCCTACTGAAACACCAAAATTACGAAATCTAGGCGAAATTTACGGGCCCGGAATAGAAGCAAGAGTTGCGATAAAGCCAAGGATACTAGATGCAAATCCCTCTCTGCAAACTATCGATATCCAAAAGAGATTATGCCTATTCTCCAGCGAAAAAGAATTGGCTTTCTTTAGAACTTACACGATTAAGAACTGCGAAATGGAGTGTGAAGCCCGAGCTTTACTCGACGTATGCAACTGTGTACATTATTATATGCCCAAAAACAAATCAACGCGTATCTGCGGCAAAGTCGATGCTAAATGCTACAATAACATGAGCATCGTAATGCCTGAAGGTTTGAAATTTCACTTTTAA

Protein

MDFLGDLEILLHNPTETPKLRNLGEIYGPGIEARVAIKPRILDANPSLQTIDIQKRLCLFSSEKELAFFRTYTIKNCEMECEARALLDVCNCVHYYMPKNKSTRICGKVDAKCYNNMSIVMPEGLKFHF

Description

Osmosensitive ion channel that mediates the cellular and behavioral response to water. Plays an essential role in gustatory water reception. Part of a complex that plays a role in tracheal liquid clearance. Probable role in sodium transport.

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.

Keywords

Cell membrane   Complete proteome   Ion channel   Ion transport   Membrane   Reference proteome   Sodium   Sodium channel   Sodium transport   Transmembrane   Transmembrane helix   Transport  

Feature

chain  Pickpocket protein 28

Uniprot

H9JTI7   A0A2A4JZR3   A0A2H1V4S6   A0A437BIK4   A0A212FML8   A0A0N1PJJ9   + More
A0A0N1PJY5   A0A0L7LSE5   A0A1B6IJF1   A0A1B6E792   A0A0A9XIS3   A0A3Q0J677   J9LZ57   T1H8X2   A0A195FFW2   A0A195BDN0   A0A151WEN4   A0A158NBF0   E2A269   B0WIZ9   A0A1B0GN28   D7EL39   E2BNL2   B4JL61   F4X372   A0A2S2NS56   A0A2J7PST9   A0A0C9RL33   B4NE18   Q29IB8   A0A151IVK1   B4M1J5   T1GNS8   A0A1B0GH45   A0A182GC76   A0A026WH41   A0A3L8DZA0   A0A3B0J8E7   B4L1U3   A0A154PLS7   A0A2P8Z373   A0A088A4H4   E9IWN6   A0A0M9A038   A0A0M5J642   A0A1S4EW92   A0A067RB77   A0A0L7QMQ9   A0A1J1IXR0   Q17NS9   B4Q1W1   B3NW89   Q86LG1   B4R639   B4IEU0   A0A1W4VHZ0   A0A1B6BZ63   A0A0P8Y7G7   B3N0C8   K7IP12   A0A1I8MB58   A0A2J7PMQ8   A0A1I8M676   A0A182FA76   A0A0L0C993   A0A182MTE6   W5J1E9   A0A182NS56   A0A182VZA7   A0A182Q3R4   A0A182R635   A0A182TA96   A0A182VK33   A0A182KFD0   A0A182L9P3   Q7PKT6   Q8T5H4   A0A182IM43   Q8MU73   A0A084VT68   A0A182WSG5   A0A182UKS5   A0A182HLB5   A0A2R7VZJ9   A0A182YAL4   A0A182PGQ2   A0A1I8NLF6   A0A1I8MQ88   A0A1I8PI06   A0A1B0ABX7   A0A1A9UHP7   A0A1A9YCN5   A0A1A9WF90   B4L493   A0A182FW18   A0A1B0ARX1   B0W822   A0A182ILL5   A0A1B0FNM8   A0A084W8C3  

Pubmed

19121390    22118469    26354079    26227816    25401762    21347285    + More
20798317    18362917    19820115    17994087    21719571    15632085    26483478    24508170    30249741    29403074    21282665    17510324    24845553    17550304    12571352    10731132    12537572    12848938    20445050    20364123    20075255    25315136    26108605    20920257    23761445    20966253    12364791    14747013    17210077    12060762    24438588    25244985   

EMBL

BABH01003719    NWSH01000320    PCG77501.1    ODYU01000646    SOQ35776.1    RSAL01000051    + More
RVE50284.1    AGBW02007651    OWR54981.1    LADI01006439    KPJ20638.1    KQ460208    KPJ16605.1    JTDY01000205    KOB78304.1    GECU01020659    JAS87047.1    GEDC01003523    JAS33775.1    GBHO01024901    JAG18703.1    ABLF02032360    ABLF02032364    ACPB03014663    KQ981606    KYN39585.1    KQ976509    KYM82676.1    KQ983238    KYQ46255.1    ADTU01000293    GL435922    EFN72474.1    DS231954    EDS28860.1    AJVK01027922    AJVK01027923    AJVK01027924    KQ973192    EFA11834.2    GL449414    EFN82791.1    CH916370    EDW00314.1    GL888609    EGI59053.1    GGMR01007365    MBY19984.1    NEVH01021922    PNF19404.1    GBYB01008935    JAG78702.1    CH964239    EDW81987.1    CH379063    EAL32735.2    KQ980895    KYN11756.1    CH940651    EDW65549.1    CAQQ02096708    AJWK01003962    AJWK01003963    AJWK01003964    JXUM01054684    KQ561832    KXJ77400.1    KK107250    EZA54394.1    QOIP01000002    RLU25553.1    OUUW01000003    SPP78135.1    CH933810    EDW06746.1    KQ434948    KZC12404.1    PYGN01000218    PSN50939.1    GL766597    EFZ14977.1    KQ435803    KOX73079.1    CP012528    ALC49086.1    KK852572    KDR21106.1    KQ414885    KOC59880.1    CVRI01000064    CRL05059.1    CH477196    EAT48395.1    CM000162    EDX02536.1    CH954180    EDV46428.1    AY226552    AY226553    AE014298    BT122074    AAF48671.3    AAO47378.1    ADE06680.1    CM000366    EDX18143.1    CH480832    EDW46194.1    GEDC01030998    JAS06300.1    CH902640    KPU77367.1    EDV38332.1    NEVH01023960    PNF17623.1    JRES01000741    KNC28817.1    AXCM01013744    AXCM01013745    ADMH02002183    ETN57987.1    AXCN02000266    AAAB01008987    EAA43142.2    AJ439398    CAD28127.1    AJ441131    CAD29634.1    ATLV01016254    ATLV01016255    KE525074    KFB41162.1    APCN01000890    KK854192    PTY12892.1    EDW07371.2    JXJN01002618    DS231856    EDS38484.1    CCAG010007674    ATLV01021410    KE525318    KFB46467.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053268    UP000053240    + More
UP000037510    UP000079169    UP000007819    UP000015103    UP000078541    UP000078540    UP000075809    UP000005205    UP000000311    UP000002320    UP000092462    UP000007266    UP000008237    UP000001070    UP000007755    UP000235965    UP000007798    UP000001819    UP000078492    UP000008792    UP000015102    UP000092461    UP000069940    UP000249989    UP000053097    UP000279307    UP000268350    UP000009192    UP000076502    UP000245037    UP000005203    UP000053105    UP000092553    UP000027135    UP000053825    UP000183832    UP000008820    UP000002282    UP000008711    UP000000803    UP000000304    UP000001292    UP000192221    UP000007801    UP000002358    UP000095301    UP000069272    UP000037069    UP000075883    UP000000673    UP000075884    UP000075920    UP000075886    UP000075900    UP000075901    UP000075903    UP000075881    UP000075882    UP000007062    UP000075880    UP000030765    UP000076407    UP000075902    UP000075840    UP000076408    UP000075885    UP000095300    UP000092445    UP000078200    UP000092443    UP000091820    UP000092460    UP000092444   

PRIDE

H9JTI7    Q86LG1   

Pfam

PF00858   ASC        + More
PF07885   Ion_trans_2
PF00271   Helicase_C
PF00270   DEAD

Interpro

IPR001873   ENaC        + More
IPR003280   2pore_dom_K_chnl       
IPR013099   K_chnl_dom       
IPR020903   ENaC_CS       
IPR027417   P-loop_NTPase       
IPR014001   Helicase_ATP-bd       
IPR001650   Helicase_C       
IPR014014   RNA_helicase_DEAD_Q_motif       
IPR011545   DEAD/DEAH_box_helicase_dom       

SUPFAM

SSF52540   SSF52540       

CDD

cd00079  HELICc

ProteinModelPortal

H9JTI7   A0A2A4JZR3   A0A2H1V4S6   A0A437BIK4   A0A212FML8   A0A0N1PJJ9   + More
A0A0N1PJY5   A0A0L7LSE5   A0A1B6IJF1   A0A1B6E792   A0A0A9XIS3   A0A3Q0J677   J9LZ57   T1H8X2   A0A195FFW2   A0A195BDN0   A0A151WEN4   A0A158NBF0   E2A269   B0WIZ9   A0A1B0GN28   D7EL39   E2BNL2   B4JL61   F4X372   A0A2S2NS56   A0A2J7PST9   A0A0C9RL33   B4NE18   Q29IB8   A0A151IVK1   B4M1J5   T1GNS8   A0A1B0GH45   A0A182GC76   A0A026WH41   A0A3L8DZA0   A0A3B0J8E7   B4L1U3   A0A154PLS7   A0A2P8Z373   A0A088A4H4   E9IWN6   A0A0M9A038   A0A0M5J642   A0A1S4EW92   A0A067RB77   A0A0L7QMQ9   A0A1J1IXR0   Q17NS9   B4Q1W1   B3NW89   Q86LG1   B4R639   B4IEU0   A0A1W4VHZ0   A0A1B6BZ63   A0A0P8Y7G7   B3N0C8   K7IP12   A0A1I8MB58   A0A2J7PMQ8   A0A1I8M676   A0A182FA76   A0A0L0C993   A0A182MTE6   W5J1E9   A0A182NS56   A0A182VZA7   A0A182Q3R4   A0A182R635   A0A182TA96   A0A182VK33   A0A182KFD0   A0A182L9P3   Q7PKT6   Q8T5H4   A0A182IM43   Q8MU73   A0A084VT68   A0A182WSG5   A0A182UKS5   A0A182HLB5   A0A2R7VZJ9   A0A182YAL4   A0A182PGQ2   A0A1I8NLF6   A0A1I8MQ88   A0A1I8PI06   A0A1B0ABX7   A0A1A9UHP7   A0A1A9YCN5   A0A1A9WF90   B4L493   A0A182FW18   A0A1B0ARX1   B0W822   A0A182ILL5   A0A1B0FNM8   A0A084W8C3  

PDB

3S3X     E-value=0.000184764,     Score=99

KEGG

101740294    K03440 acid-sensing ion channel, other | (RefSeq) pickpocket protein 28-like

GO

GO:0005272   GO:0016021   GO:0005267   GO:0071462   GO:0035002   GO:0042756   GO:0005886   GO:0009415   GO:0006814   GO:0005524   GO:0003676   GO:0016020   GO:0043565   GO:0016742   GO:0005737   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR11690  

Subcellular location

Cell membrane  

Length:

129

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01693

outside

1  -  129

 

 

Pi

199.780221

Theta

154.49788

Tajima's D

0.025846

CLR

0.404812

CSRT

0.378881055947203

Interpretation

Uncertain