Gene

KWMTBOMO09607

Annotation

PREDICTED:_uncharacterized_protein_LOC105842033_[Bombyx_mori]

Location

Bomo_Chr16(+):5241699-5245246      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.477

CDS

ATGAAAAACAGGACAATCAAGATGGACAAGCCACGAAGGAAATATAAAGATTACGACGACAGCTTGCTAGAAATTGCGGTAGGACTCGTAGAAAATAAGAATATTTCGTCATACGAGGCAGAAAAACAATTTGGTATCCCTCGCCGCACGATTTTAAATAAGGTCAAACAAAGACACACAAAAAGAGTTGGCTGTCCTACCAAACTGCCACTAGCTGATGAAAAGAAAATTACAAGCTGTTTGATTCTATGTGGAGAATATGGGTATCCCCTTACCTGCTTTGAACTAAGGTCAATAGTACACGACTATTTAGTTAAAAATGGACTCACTTATCTTTTTAATAACAAAATGCCCGGCCAGAAGTGGGTAAGGAACTTTTTGAAACGCAACAAAAATATTCTGACTGTGCGGTCTACAACAAATATAAAGGAATCTCGGGCCAGAAAAAGCATACAAGACTACAATACTTATTTTGAGAACCTTAAAATTTCTCTTCATAATGTTAAACCAGATGATATAGTGAACTATGACGAGACAAATTTTTCTGACAACCCGGGATCCCAAAAATGCATATTTAAAGCAGGCACTAAACATCCAAATAAAACTTTAAATAGCACCAAAACTGCAATATCAGTCATGTTTTCGGCTACAGCCAGTGGAGTAATATTCCCACCGTATGTGGTATATAAAGCTGATAATTTATGGACAAACTGGTGTACTAATGGTCCTAAAGGAACCAGATATAACAAAACCAAATCTGGCTGGTTTGATTCGGAAACGTTCGAAGATTGGTTTAATACCATAATTATTCCATGGGCAAAGAAATCTACAGATCCTAAGGTCTTGATCGGAGACAATTTATCATCACATATAAATATAAGCATAATAACAAAGTGTCAAGAAAATAATATAAGATTTATTTTCTTGCCACCCAATTCGACACATCATACTCAACCTCTCGATGTGGCCTTTTTCGGCCCATTAAAGAGAGAATGGAGAAGAATTTTAATGGACTACAAAGTTCGACACCCAAGCGCAAATACCTTAAATAAACAAATATTCCCCGAATTACTAAATATACTACTGGATGCCTCGAAACTTACACAAAGTAAAAATATAATTAGCGGATTTCGTGCCACTGGGATACATCCTATTAATCCAGAAGCTGTACTAAAGAAATTGCCAGATTATCGCAGGCTTCAAACCGTGACTTATGACGAGACCTTTGTCAACTATTTACAAAATTTGAGAACTCCGGCTACCCATCAAAAAAGAACTGCAAATAAAAAACTAAATACAGAACCTGGAAAATCTGTAAGTGTTAATGATTTGAATGAAAAACTTAACAAACGGGCTAATAAAGTAAAAAATAATAAAAAGACAAGTACCATTACCGAAAAGATTCAGTTACAACCGGATATCGCAGACATTTCTACTGCTATTTTAGACCGTAATTTAAACAATATTTTATCAAATGCTAGACAAGATTTATCACCTCATTCAGATGATAGCAAACTTATTACTAATGTAAAAGTTCATGCTGAAGTACATAGAAATAAGGGTATGGATTCATTTGATATGAGCTCAGCTCTTGTCGATGGAGCAACAAGTGATTAA

Protein

MKNRTIKMDKPRRKYKDYDDSLLEIAVGLVENKNISSYEAEKQFGIPRRTILNKVKQRHTKRVGCPTKLPLADEKKITSCLILCGEYGYPLTCFELRSIVHDYLVKNGLTYLFNNKMPGQKWVRNFLKRNKNILTVRSTTNIKESRARKSIQDYNTYFENLKISLHNVKPDDIVNYDETNFSDNPGSQKCIFKAGTKHPNKTLNSTKTAISVMFSATASGVIFPPYVVYKADNLWTNWCTNGPKGTRYNKTKSGWFDSETFEDWFNTIIIPWAKKSTDPKVLIGDNLSSHINISIITKCQENNIRFIFLPPNSTHHTQPLDVAFFGPLKREWRRILMDYKVRHPSANTLNKQIFPELLNILLDASKLTQSKNIISGFRATGIHPINPEAVLKKLPDYRRLQTVTYDETFVNYLQNLRTPATHQKRTANKKLNTEPGKSVSVNDLNEKLNKRANKVKNNKKTSTITEKIQLQPDIADISTAILDRNLNNILSNARQDLSPHSDDSKLITNVKVHAEVHRNKGMDSFDMSSALVDGATSD

Uniprot

A0A3S2TIP6   A0A1E1WU51   A0A2W1BUJ3   A0A2A4IT23   A0A1Y1KZ51   X1XEK3   + More
A0A1B6KLJ7   J9KC80   J9JX79   X1WLE6   J9JNH9   A0A1B6L0P8   A0A336M092   A0A1S4EG94   A0A3Q0J1E8   J9K6M6   X1WST4   A0A1Y1K537   J9LW80   A0A2S2R564   J9LWC9   A0A1B6GCB9   J9KAI8   H9JBQ2   J9M3V3   A0A2H8TJC7   J9K4L7   J9JPC0   A0A2S2NMJ8   A0A2P8YWM9   A0A2P8Z814   A0A1B6CLN0   B0XDM0   J9K1E0   J9M6Q1   J9KH76   J9K5J2   J9KE52   J9L3Y1   X1XT95   J9JJQ5   A0A1W7R625   A0A0J7KF01   J9LSN8   A0A1B6JFL2   A0A2W1BR16   K7JIQ4   A0A2A4JKM4   A0A2H8TYF0  

Pubmed

28756777    28004739    19121390    29403074    20075255   

EMBL

RSAL01000111    RVE47096.1    GDQN01000733    JAT90321.1    KZ149957    PZC76450.1    + More
NWSH01008222    PCG62646.1    GEZM01069098    JAV66644.1    ABLF02014120    ABLF02031335    GEBQ01027923    JAT12054.1    ABLF02031950    ABLF02024787    ABLF02042417    ABLF02024890    GEBQ01022752    JAT17225.1    UFQS01000373    UFQT01000373    SSX03288.1    SSX23654.1    ABLF02012638    ABLF02006951    GEZM01096654    GEZM01096605    JAV54775.1    ABLF02032408    ABLF02032409    ABLF02032413    GGMS01015966    MBY85169.1    ABLF02036293    ABLF02036295    ABLF02036300    ABLF02036303    ABLF02036307    GECZ01009826    JAS59943.1    ABLF02020969    ABLF02020971    BABH01024482    ABLF02005267    ABLF02005269    GFXV01002448    MBW14253.1    ABLF02035413    ABLF02021095    ABLF02021103    ABLF02021105    GGMR01005791    MBY18410.1    PYGN01000316    PSN48625.1    PYGN01000900    PYGN01000153    PSN39546.1    PSN52644.1    GEDC01023010    JAS14288.1    DS232767    EDS45530.1    ABLF02018386    ABLF02004276    ABLF02004277    ABLF02019754    ABLF02043119    ABLF02012639    ABLF02002783    ABLF02010048    ABLF02034252    ABLF02013132    ABLF02013134    ABLF02013135    ABLF02005217    GEHC01001021    JAV46624.1    LBMM01008491    KMQ88832.1    ABLF02009566    GECU01010063    JAS97643.1    KZ149928    PZC77478.1    AAZX01014011    NWSH01001259    PCG71952.1    GFXV01007016    MBW18821.1   

Proteomes

UP000283053    UP000218220    UP000007819    UP000079169    UP000005204    UP000245037    + More
UP000002320    UP000036403    UP000002358   

PRIDE

H9JBQ2   

Pfam

PF03184   DDE_1        + More
PF05225   HTH_psq
PF07530   PRE_C2HC
PF05699   Dimer_Tnp_hAT
PF04937   DUF659
PF13843   DDE_Tnp_1_7
PF03372   Exo_endo_phos
PF05380   Peptidase_A17
PF03221   HTH_Tnp_Tc5

Interpro

IPR004875   DDE_SF_endonuclease_dom        + More
IPR009057   Homeobox-like_sf       
IPR007889   HTH_Psq       
IPR008906   HATC_C_dom       
IPR012337   RNaseH-like_sf       
IPR006579   Pre_C2HC_dom       
IPR007021   DUF659       
IPR029526   PGBD       
IPR027124   Swc5/CFDP2       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR011335   Restrct_endonuc-II-like       
IPR011604   Exonuc_phg/RecB_C       
IPR008042   Retrotrans_Pao       
IPR006600   HTH_CenpB_DNA-bd_dom       

SUPFAM

SSF46689   SSF46689        + More
SSF53098   SSF53098       
SSF56219   SSF56219       
SSF52980   SSF52980       

Gene 3D

3.60.10.10     3.90.320.10    

ProteinModelPortal

A0A3S2TIP6   A0A1E1WU51   A0A2W1BUJ3   A0A2A4IT23   A0A1Y1KZ51   X1XEK3   + More
A0A1B6KLJ7   J9KC80   J9JX79   X1WLE6   J9JNH9   A0A1B6L0P8   A0A336M092   A0A1S4EG94   A0A3Q0J1E8   J9K6M6   X1WST4   A0A1Y1K537   J9LW80   A0A2S2R564   J9LWC9   A0A1B6GCB9   J9KAI8   H9JBQ2   J9M3V3   A0A2H8TJC7   J9K4L7   J9JPC0   A0A2S2NMJ8   A0A2P8YWM9   A0A2P8Z814   A0A1B6CLN0   B0XDM0   J9K1E0   J9M6Q1   J9KH76   J9K5J2   J9KE52   J9L3Y1   X1XT95   J9JJQ5   A0A1W7R625   A0A0J7KF01   J9LSN8   A0A1B6JFL2   A0A2W1BR16   K7JIQ4   A0A2A4JKM4   A0A2H8TYF0  

KEGG

105842033    no KO assigned | (RefSeq) uncharacterized LOC105842033

GO

GO:0003676   GO:0003677   GO:0005634   GO:0046983   GO:0016021   GO:0009058   GO:0016742   GO:0005737   GO:0006730   GO:0009258   GO:0016155   GO:0003824  

PANTHER

PTHR23227  

Subcellular location

Nucleus  

Length:

538

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.45731999999999

Exp number, first 60 AAs:

0.00657

Total prob of N-in:

0.27956

outside

1  -  538

 

 

Pi

153.168609

Theta

170.431399

Tajima's D

-1.006767

CLR

175.230413

CSRT

0.136793160341983

Interpretation

Uncertain