Silkworm Genome Informatics Database

Gene

KWMTBOMO09602

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr16(-):5141071-5142318 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.8

CDS

ATGGAGTGGACGCTTAAAGAAGACCGTGTTGCAGTTATTGCGTTGCATCGTTGCGGTTACGCGCCAATTCAAATTTTTAATATACTGAAAAATTTGAATATAACCAAAAGATTCGTTTATCGTACCATCAAACGATACAATGAAGACTCTAGTGTTGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGCTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACAAGAGAGCTACAACAAACAAAATGATAAGGTGTATGTACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCGTGTCCAACAAGGTCATTTTCCATCCTCGCTCATAGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTTCATTTTTGTGAGAAAGGTGTAAAAACGAATGCAGTTGTGTATCAAAATACAGTCCTGACGAACCTTGTGGAACCTGTTTCTCATACCATGTTCAATAACAGGTACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATTGACTTCATCCGGCACGAAGTCTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGTCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTACTGCGATAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGAAAGTCATTTTGAATAA

Protein

MEWTLKEDRVAVIALHRCGYAPIQIFNILKNLNITKRFVYRTIKRYNEDSSVDDRSRSGRPRSARTPAVIKAVKARIQRNPKQESYNKQNDKVYVHSSEEASNRIPRVQQGHFPSSLIVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRYWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEVWPSSSPDLNPLDYKICQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRTAIDDWPRRLKACIQNHESHFE

Similarity

Belongs to the TGF-beta family.
Belongs to the UDP-glycosyltransferase family.

Uniprot

A0A3S2LTJ6 A0A437AV44 A0A437B2G3 A0A3S2M6X4 A0A3S2LQG1 A0A437BL26 + More
A0A3S2LXK8 A0A437B0M5 A0A0C2GWR6 E3M065 A0A183FT12 A0A3P7ZBK4 E3ND45 A0A016S9F8 H3EZH8

Pubmed

25730766 18806794

EMBL

RSAL01000012 RVE53510.1 RSAL01000392 RVE41996.1 RSAL01000191 RVE44681.1 + More
RSAL01000022 RVE52367.1 RSAL01000470 RVE41612.1 RSAL01000039 RVE51021.1 RSAL01000133 RVE46339.1 RSAL01000236 RVE43715.1 KN728607 KIH63514.1 DS268420 EFO87874.1 UZAH01027002 VDO87649.1 DS268606 EFO93488.1 JARK01001601 EYB87313.1

Proteomes

UP000283053 UP000008281 UP000050761 UP000024635 UP000005239

Pfam

PF00019   TGF_beta        + More
PF07992   Pyr_redox_2
PF00201   UDPGT
PF13358   DDE_3
PF00292   PAX

Interpro

IPR001839   TGF-b_C        + More
IPR029034   Cystine-knot_cytokine
IPR017948   TGFb_CS
IPR015615   TGF-beta-rel
IPR009057   Homeobox-like_sf
IPR036188   FAD/NAD-bd_sf
IPR023753   FAD/NAD-binding_dom
IPR002213   UDP_glucos_trans
IPR035595   UDP_glycos_trans_CS
IPR036388   WH-like_DNA-bd_sf
IPR038717   Tc1-like_DDE_dom
IPR001523   Paired_dom

SUPFAM

SSF57501   SSF57501        + More
SSF46689   SSF46689
SSF51905   SSF51905

Gene 3D

2.10.90.10 3.50.50.60 1.10.10.10

ProteinModelPortal

A0A3S2LTJ6 A0A437AV44 A0A437B2G3 A0A3S2M6X4 A0A3S2LQG1 A0A437BL26 + More
A0A3S2LXK8 A0A437B0M5 A0A0C2GWR6 E3M065 A0A183FT12 A0A3P7ZBK4 E3ND45 A0A016S9F8 H3EZH8

PDB

5CR4 E-value=9.5322e-08, Score=133

KEGG

101740752 no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0005576 GO:0008083 GO:0003677 GO:0006355 GO:0008270 GO:0046872 GO:0009058 GO:0016742 GO:0005737 GO:0006730 GO:0009258 GO:0016155 GO:0003824

PANTHER

PTHR11848

Subcellular location

Secreted

Length:

271

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.203

Exp number, first 60 AAs:

0.947

Total prob of N-in:

0.08575

outside

1 - 271

Pi

69.219384

Theta

42.312913

Tajima's D

1.782418

CLR

0.409905

CSRT

0.850057497125144

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree