Gene

KWMTBOMO09593  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012994

Annotation

PREDICTED:_vanin-like_protein_2_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr16(-):4969152-4981568      View in EpiBrowser

Full name

Vanin-like protein 1      

Location in the cell

PlasmaMembrane   Reliability : 2.185

CDS

ATGAAGCTTATTTTTTACGGATTATTAATATTTTCACTGACGAAAGCTACTTCACAAAAATCAACACCAGAGGATAGTCAGTACGTAGCAGCAGTTGTTGAATTCATCATGTCAGATGACGTCGAAGACAACATTCGTAACTACATTCATTACATTGAGGAGGCTGCTAAACAGCATGCAGACATCATAGTTTTCCCGGAGCTGTCTTTGACAAATAAAACCACAGCCTTCGTTGTACCAGTCTATGGCTCACTGAAACGATATCCCATACCGGCGATACACCCAGATTTGTATGATAATATTTTAGTGTCAATATCGGCGGCTGCAAGAAGTAATCAAATCTACGTTGTGGTCAACGGCCGAGAGCTCATGGATTGTACTAAGAATGACACCGGCGAACCTTGTCCGGAGCTGAAAGAATATATTTTTAATACAAACGTTGTGTTTGACAGGAACGGAGCGGTTATTGATCGATATCGCAAGATCAACCTTTTCCGGGAATATTCTCACACGCCCGCTTTGAGCCCAGACTTGGGCTATTTCGACACAGATTTCGGAGTTAAATTCAGTCACTTTATTTGCTTCGACATCATGTTTCAAGTGCCGGCAGTACAGTCCGTGCAGAAACTGAATGTCACCGACGTGATTTTCAGTACGATGTGGTTTTCGGAGTTGCCGTATTTAACTGCTGTACAAATTCAACAAGCATACGCCTACGAAATGAATGTGAATTTTATTGGTGCCGGAGCTAATAATATTAGCCTTGGTAATGCAGGATCAGGCATATATTCCGGTCGAGCGGGTGCTTTGGTCAGCATAATGCCGGGAGTTCCAACCACACGACTCCTTGTTTCCAGAGTCCCAAAAATCCCTGGAAAAGTATCAGGTAAATATCCAGGGCCTATCGACGACAGTCTTACAAATACAGATAATTTAGTCATATACACCGATCCAACCTTGGACACTCACGTCAGCAGGCCTCTGGTACCTGGCTTCCAAGAGTTTACGCTTGTCGATAAAGACGTCAGCTGTTCCTTCAGCATCCGGTTAAAGAACAAGAGCGGTGATGCGTACCCACATTTCCGTGCCGTCGTGCAAGATGGGTCCAATGTCTACGTGAATCGTGAGATAGGAGTCGCGGCTTGTCTAGTAGTTGCTTGTACGACTGAAGATTTCAAAAGTTGCGCCCAAAGATATAAAAACGAAGAAAGCAACGTTGAAATTGAAAATTTGGTCATCGAAATGACAACATTTAAAAACACATACAACGAAACATTGCAATGTGATAATATGCTATACCTACCAATTTCGGTCAGAGTAAACAAGCTTCCGCTCGACCCGACAAACTACACTTTTGTGGAAGAATCACCAATAACATCAAACGGCAGTGAAAAAACGAAAAACGAAGCAACAGCGACAATCATTGATCGTACGAAATTCTTGTTCAAACTAAACAAACCACAAACAGATTTAGTGGCTTTCGGAATATGGGGTAGATTGTTTTTAAATGATTTCGATCACAGCAATAACGAGAGCAAATCAATGTGA

Protein

MKLIFYGLLIFSLTKATSQKSTPEDSQYVAAVVEFIMSDDVEDNIRNYIHYIEEAAKQHADIIVFPELSLTNKTTAFVVPVYGSLKRYPIPAIHPDLYDNILVSISAAARSNQIYVVVNGRELMDCTKNDTGEPCPELKEYIFNTNVVFDRNGAVIDRYRKINLFREYSHTPALSPDLGYFDTDFGVKFSHFICFDIMFQVPAVQSVQKLNVTDVIFSTMWFSELPYLTAVQIQQAYAYEMNVNFIGAGANNISLGNAGSGIYSGRAGALVSIMPGVPTTRLLVSRVPKIPGKVSGKYPGPIDDSLTNTDNLVIYTDPTLDTHVSRPLVPGFQEFTLVDKDVSCSFSIRLKNKSGDAYPHFRAVVQDGSNVYVNREIGVAACLVVACTTEDFKSCAQRYKNEESNVEIENLVIEMTTFKNTYNETLQCDNMLYLPISVRVNKLPLDPTNYTFVEESPITSNGSEKTKNEATATIIDRTKFLFKLNKPQTDLVAFGIWGRLFLNDFDHSNNESKSM

Similarity

Belongs to the carbon-nitrogen hydrolase superfamily. BTD/VNN family.

Keywords

Complete proteome   Glycoprotein   Hydrolase   Reference proteome   Signal  

Feature

chain  Vanin-like protein 1

Uniprot

H9JTY2   A0A2A4K2W7   A0A2H1W8V8   A0A194REE3   A0A3S2PEU5   A0A212FMS3   + More
I4DJM4   A0A194PXY9   A0A437BIS7   A0A2H1W3I2   A0A0L7LIZ2   U5ETE5   A0A1L8E2M0   A0A1L8E272   A0A067RI16   A0A182NCA6   A0A2M4AED9   T1DU01   A0A1L8EIR4   A0A182Q060   A0A182Y6T3   A0A182WFT3   A0A1S4FCJ9   A0A195BRH3   A0A182FTF0   Q177U2   A0A182PRL4   A0A336LT70   A0A182SQU6   B0WM31   A0A182KV42   A0A2M4CZZ6   A0A1S4H4T1   A0A182JWQ9   A0A182WXV0   A0A182G7M9   W5JPI1   B0XE89   A0A2J7PTN3   A0A2M4CZV0   Q7QDZ4   A0A087YYX7   A0A182V2A2   F4WQP6   A0A182TIV7   A0A336K3I7   A0A182I5X1   A0A158NRV3   A0A182RL31   B0WM32   A0A1B0DIU5   A0A1Q3EX40   A0A1I8Q8F4   B4R5D7   A0A1I8MF53   B4M863   Q9W430   A0A1A9ZEH4   B4JNK9   A0A182JG97   A0A1A9UQC0   A0A195D853   A0A0L0CAJ8   A0A1I8P4Y0   Q17HF6   B3MQ46   A0A1I8NXM8   B4NPE1   A0A336KP63   D3TRU6   A0A1A9XBV5   A0A1B0GA13   A0A1B0B893   A0A1B0BTS6   B4NPD9   A0A1W4VTB8   A0A0L0C896   E9IY76   A0A336MY47   A0A1I8MTJ1   A0A336M7R1   K7ILY9   B3MQ44   B3NXP3   A0A0C9RSY4   A0A1J1HQC9   B4PYP6   B4R5D6   E9IY83   E1ZWI0   A0A0A1WQ72   Q9NFP1   A0A232F1W1   A0A1Y1KYZ7   A0A1I8NMJ9   B3NXP2   A0A195ESI4   B4I0E3   A0A0M5J361   B0XE88  

Pubmed

19121390    26354079    22118469    22651552    26227816    24845553    + More
25244985    17510324    20966253    12364791    26483478    20920257    21719571    21347285    17994087    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26108605    20353571    21282665    20075255    17550304    20798317    25830018    10501839    12537569    17893096    28648823    28004739   

EMBL

BABH01003785    BABH01003786    BABH01003787    BABH01003788    BABH01003789    BABH01003790    + More
NWSH01000190    PCG78601.1    ODYU01007067    SOQ49508.1    KQ460323    KPJ15957.1    RSAL01000066    RVE49386.1    AGBW02007651    OWR54999.1    AK401492    BAM18114.1    KQ459595    KPI96015.1    RSAL01000051    RVE50259.1    ODYU01006032    SOQ47516.1    JTDY01000923    KOB75417.1    GANO01002813    JAB57058.1    GFDF01001117    JAV12967.1    GFDF01001276    JAV12808.1    KK852461    KDR23447.1    GGFK01005833    MBW39154.1    GAMD01000594    JAB00997.1    GFDG01000316    JAV18483.1    AXCN02001762    KQ976424    KYM88554.1    CH477371    EAT42426.1    UFQS01000100    UFQT01000100    SSW99553.1    SSX19933.1    DS231994    EDS30859.1    GGFL01006667    MBW70845.1    AAAB01008848    JXUM01046668    JXUM01046669    KQ561486    KXJ78426.1    ADMH02000540    ETN66031.1    DS232811    EDS45922.1    NEVH01021232    PNF19697.1    GGFL01006668    MBW70846.1    EAA07047.4    GGFL01006666    MBW70844.1    GL888275    EGI63409.1    SSW99554.1    SSX19934.1    APCN01003536    ADTU01024337    EDS30860.1    AJVK01063153    GFDL01015166    JAV19879.1    CM000366    EDX17233.1    CH940653    EDW62339.1    AE014298    BT122052    BT133497    AAF46130.1    ADD31632.1    AFI71927.1    CH916371    EDV92302.1    KQ981153    KYN09053.1    JRES01000767    KNC28469.1    CH477249    EAT46106.1    CH902621    EDV44472.1    CH964291    EDW86381.2    UFQS01000702    UFQT01000702    SSX06299.1    SSX26653.1    EZ424148    ADD20424.1    CCAG010018793    JXJN01009882    JXJN01020343    EDW86379.2    KNC28470.1    GL766908    EFZ14498.1    UFQS01002349    UFQT01002349    SSX13837.1    SSX33257.1    UFQS01000661    UFQT01000661    SSX05886.1    SSX26245.1    EDV44470.1    CH954180    EDV47344.1    GBYB01010610    GBYB01010611    GBYB01010612    GBYB01010613    JAG80377.1    JAG80378.1    JAG80379.1    JAG80380.1    CVRI01000007    CRK88417.1    CM000162    EDX00982.1    EDX17232.1    EFZ14468.1    GL434853    EFN74417.1    GBXI01013093    JAD01199.1    AJ276261    AY052034    NNAY01001302    OXU24427.1    GEZM01073722    GEZM01073721    JAV64915.1    EDV47343.1    KQ981993    KYN30867.1    CH480819    EDW52974.1    CP012528    ALC48761.1    EDS45921.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000283053    UP000007151    UP000053268    + More
UP000037510    UP000027135    UP000075884    UP000075886    UP000076408    UP000075920    UP000078540    UP000069272    UP000008820    UP000075885    UP000075901    UP000002320    UP000075882    UP000075881    UP000076407    UP000069940    UP000249989    UP000000673    UP000235965    UP000007062    UP000075903    UP000007755    UP000075902    UP000075840    UP000005205    UP000075900    UP000092462    UP000095300    UP000000304    UP000095301    UP000008792    UP000000803    UP000092445    UP000001070    UP000075880    UP000078200    UP000078492    UP000037069    UP000007801    UP000007798    UP000092443    UP000092444    UP000092460    UP000192221    UP000002358    UP000008711    UP000183832    UP000002282    UP000000311    UP000215335    UP000078541    UP000001292    UP000092553   

PRIDE

H9JTY2    Q9NFP1   

Pfam

PF00795   CN_hydrolase        + More
PF00046   Homeodomain

Interpro

IPR036526   C-N_Hydrolase_sf        + More
IPR003010   C-N_Hydrolase       
IPR040154   Biotinidase/VNN       
IPR012101   Biotinidase-like_euk       
IPR001356   Homeobox_dom       
IPR009057   Homeobox-like_sf       
IPR017970   Homeobox_CS       
IPR036922   Rieske_2Fe-2S_sf       

SUPFAM

SSF56317   SSF56317        + More
SSF46689   SSF46689       
SSF50022   SSF50022       

Gene 3D

3.60.110.10    

CDD

cd07567  biotinidase_like
cd00086  homeodomain

ProteinModelPortal

H9JTY2   A0A2A4K2W7   A0A2H1W8V8   A0A194REE3   A0A3S2PEU5   A0A212FMS3   + More
I4DJM4   A0A194PXY9   A0A437BIS7   A0A2H1W3I2   A0A0L7LIZ2   U5ETE5   A0A1L8E2M0   A0A1L8E272   A0A067RI16   A0A182NCA6   A0A2M4AED9   T1DU01   A0A1L8EIR4   A0A182Q060   A0A182Y6T3   A0A182WFT3   A0A1S4FCJ9   A0A195BRH3   A0A182FTF0   Q177U2   A0A182PRL4   A0A336LT70   A0A182SQU6   B0WM31   A0A182KV42   A0A2M4CZZ6   A0A1S4H4T1   A0A182JWQ9   A0A182WXV0   A0A182G7M9   W5JPI1   B0XE89   A0A2J7PTN3   A0A2M4CZV0   Q7QDZ4   A0A087YYX7   A0A182V2A2   F4WQP6   A0A182TIV7   A0A336K3I7   A0A182I5X1   A0A158NRV3   A0A182RL31   B0WM32   A0A1B0DIU5   A0A1Q3EX40   A0A1I8Q8F4   B4R5D7   A0A1I8MF53   B4M863   Q9W430   A0A1A9ZEH4   B4JNK9   A0A182JG97   A0A1A9UQC0   A0A195D853   A0A0L0CAJ8   A0A1I8P4Y0   Q17HF6   B3MQ46   A0A1I8NXM8   B4NPE1   A0A336KP63   D3TRU6   A0A1A9XBV5   A0A1B0GA13   A0A1B0B893   A0A1B0BTS6   B4NPD9   A0A1W4VTB8   A0A0L0C896   E9IY76   A0A336MY47   A0A1I8MTJ1   A0A336M7R1   K7ILY9   B3MQ44   B3NXP3   A0A0C9RSY4   A0A1J1HQC9   B4PYP6   B4R5D6   E9IY83   E1ZWI0   A0A0A1WQ72   Q9NFP1   A0A232F1W1   A0A1Y1KYZ7   A0A1I8NMJ9   B3NXP2   A0A195ESI4   B4I0E3   A0A0M5J361   B0XE88  

PDB

4CYY     E-value=1.21116e-26,     Score=299

KEGG

101740685    K08069 pantetheine hydrolase [EC:3.5.1.92] | (RefSeq) vanin-like protein 1

GO

GO:0006807   GO:0016811   GO:0016021   GO:0009408   GO:0018054   GO:0016787   GO:0071110   GO:0005634   GO:0006355   GO:0043565   GO:0019898   GO:0016491   GO:0051537   GO:0016810   GO:0050660   GO:0016020   GO:0016740   GO:0006108   GO:0030060   GO:0016615   GO:0000049   GO:0016876  

PANTHER

PTHR10609  

Subcellular location

Nucleus  

SignalP

Position:   1 - 18,         Likelihood:  0.983683

 

 

Length:

515

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02091

Exp number, first 60 AAs:

0.00031

Total prob of N-in:

0.00057

outside

1  -  515

 

 

Pi

179.659075

Theta

149.317708

Tajima's D

0.757232

CLR

0.063511

CSRT

0.589270536473176

Interpretation

Uncertain