SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09591  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012838
Annotation
hypothetical_protein_KGM_15447_[Danaus_plexippus]
Full name
Flotillin-2      
Location in the cell
Cytoplasmic   Reliability : 2.601
 

Sequence

CDS
ATGTACGCGCTTGTAATATATGTACATTTAAGTGGCTGTTTCGGGCCGACCACGAAACGTACCATAGTGGGTGGATGGGCATGGGCCTGGTGTCTGGTTACGGACGTCCAACGTATATCCCTTGAAGTGATGACATTGAACCCGATGTGCGAGTACGTTGAAACGGCCCAAGGAGTGCCGCTCACGGTGACCGGAGTCGCCCAGTGCAAGATCATGAACGAAGACGAACTTCTCACAACTGCCTGCGAGCAGTTCCTGGGCAAGACCGTCAAAGAGATTAAGATGACTGTCCTGCAAACGTTGGAGGGTCATTTGCGAGCTATTCTCGGAACTCTTACAGTAGAAGAGGTGTACAAAGACAGGGACCAATTCGCGGGCTTGGTACGCGAAGTGGCTGCGCCGGACGTCGGAAGAATGGGAATCGAGATTCTGTCCTTCACGATTAAGGACGTCTACGACGATGTCCAGTATCTGGCCAGCTTGGGGAAGTCGCAGACGGCCAACGTGAAGAGGGACGCTGACGTCGGTGTCGCTCTGGCTAACCGAGATGCTGGTATTAGGGAAGCGGAATGTGAGAAAAACGCAATGGACGTCAAATATTCGATGGACACCAAAATAGAAGACAACACGAGACTCTTCAAACTACAGAAGGCGCAGTTTGATCAAGAAATAAACACAGCTAAAGCGGAAGCGGCTTTGGCTTACGAACTGCAAGCAGCGAAAATAAAACAGAGAATCCGAAACGAAGAGATACAAATCGAAGTCGTCGAGCGTCGTAAGCAAATAGAAGTGGAGCAACAAGAAATCCAACGCAGGGAGGAAGAACTGATAGCGACAGTGCGTCTGCCAGCCGAGGCGGAGGCTTACCGTCTGCAAACAATCGCTGAAGGAAAACGTACTCAAACTGTTGAGGCAGCTAAGGCGGACGCGGAACGCATCAAGGTTCTGGGATTGGCTGAAGCGACGGCCATCGGGGACGTGGGCAAAGCTGACGCCGAGAGGATGCTGGCCAAGGCTAAAGTCTACAAGCAGTATGGCGATGCGGCTATTATGGCCCTCGTTCTCGAAGCGCTGCCAAAGATCGCGGCAGAAGTGTCGGCTCCATTAGCGAAGACGGACGAGATAGTCCTGGTAGGAGACAACGGAACCACCGGAGACGTGGCTCGTCTCGCGAGCGGGATCCCGCCGGCCCTGAAGACTCTCACCGGCTTAGACCTGACACAGGTGCTGAAACGTTTGCACCCGACCGGCGGAGAAGAGACGAACCTTGCAGCTGCCGCAACCAAGAAGAAGGAAGTCGTAGCTTTCTAA
Protein
MYALVIYVHLSGCFGPTTKRTIVGGWAWAWCLVTDVQRISLEVMTLNPMCEYVETAQGVPLTVTGVAQCKIMNEDELLTTACEQFLGKTVKEIKMTVLQTLEGHLRAILGTLTVEEVYKDRDQFAGLVREVAAPDVGRMGIEILSFTIKDVYDDVQYLASLGKSQTANVKRDADVGVALANRDAGIREAECEKNAMDVKYSMDTKIEDNTRLFKLQKAQFDQEINTAKAEAALAYELQAAKIKQRIRNEEIQIEVVERRKQIEVEQQEIQRREEELIATVRLPAEAEAYRLQTIAEGKRTQTVEAAKADAERIKVLGLAEATAIGDVGKADAERMLAKAKVYKQYGDAAIMALVLEALPKIAAEVSAPLAKTDEIVLVGDNGTTGDVARLASGIPPALKTLTGLDLTQVLKRLHPTGGEETNLAAAATKKKEVVAF

Summary

Subunit
Heterooligomeric complex of flotillins 1 and 2.
Similarity
Belongs to the band 7/mec-2 family. Flotillin subfamily.
Keywords
Alternative splicing   Cell adhesion   Complete proteome   Membrane   Reference proteome  
Feature
chain  Flotillin-2
splice variant  In isoform D.
EMBL
AGBW02007651    OWR55002.1    KQ460323    KPJ15960.1    KQ459595    KPI96019.1    + More
RSAL01000051    RVE50261.1    GFDF01003533    JAV10551.1    GANO01002227    JAB57644.1    GFDL01000867    JAV34178.1    GDUN01000316    JAN95603.1    GFDL01000899    JAV34146.1    ATLV01017524    ATLV01017525    ATLV01017526    KE525172    KFB42243.1    GFDL01000886    JAV34159.1    GFDL01000892    JAV34153.1    AAAB01008844    EAA06055.6    AXCM01001592    AXCM01001593    AXCN02000039    GDHF01028939    GDHF01028887    GDHF01014726    GDHF01009275    JAI23375.1    JAI23427.1    JAI37588.1    JAI43039.1    GAKP01008321    GAKP01008320    JAC50632.1    GBXI01013457    JAD00835.1    GAMC01018730    GAMC01018729    JAB87826.1    GEBQ01013354    JAT26623.1    CP012528    ALC48837.1    GFDL01016006    JAV19039.1    GGFM01001599    MBW22350.1    GGFK01002561    MBW35882.1    GGFL01005016    MBW69194.1    GECU01018098    JAS89608.1    GECZ01030108    GECZ01014452    JAS39661.1    JAS55317.1    APCN01003121    GDHF01029278    GDHF01001503    JAI23036.1    JAI50811.1    AE014298    AGB95396.1    AJWK01014066    AJWK01014067    AJWK01014068    AJWK01014069    AJWK01014070    AY069755    BT009962    AF044916    AAN09344.1    CH933810    EDW06798.2    GBBI01002241    JAC16471.1    GDKW01001755    JAI54840.1    GBGD01001574    JAC87315.1    CH916370    EDW00256.1    ACPB03007746    OUUW01000003    SPP78667.1    AGB95394.1    CM000162    KRK06312.1    CH954180    KQS30328.1    EDV47065.1    CM000366    EDX17921.1    CH379063    KRT06123.1    EDX01706.1    CH480847    EDW51045.1    BT126133    ADZ49071.1    AGB95397.1    EDY72298.1    CH479242    EDW37616.1    CH902630    EDV38463.1    KRT06122.1    UFQS01000042    UFQT01000042    SSW98353.1    SSX18739.1    AGB95395.1    GBHO01016125    GBHO01016087    GBHO01015299    GBHO01012128    GBRD01011886    JAG27479.1    JAG27517.1    JAG28305.1    JAG31476.1    JAG53938.1    GL732535    EFX84251.1    LRGB01002451    KZS07506.1    GDIP01135304    JAL68410.1    ABLF02038148    ABLF02038150    ABLF02056862    GBYB01006360    JAG76127.1    AAZX01003729    QOIP01000012    RLU15836.1    GFTR01005645    JAW10781.1    KQ976532    KYM81569.1    GL448571    EFN84153.1    KK107261    EZA53945.1    NCKU01002933    RWS08517.1    KZ288238    PBC31355.1    ADTU01026677    ADTU01026678    ADTU01026679    KQ980314    KYN16686.1    GALX01003517    JAB64949.1    GDIQ01072514    JAN22223.1    GDIQ01072515    JAN22222.1    KQ978473    KYM93716.1    LBMM01004060    KMQ92850.1    GEZM01052565    JAV74434.1    KK121567    KFM80735.1    NCKV01001537    RWS28167.1    GL442298    EFN63612.1    GDIP01024963    JAM78752.1    AMQN01007193    KB300180    ELU07072.1    MNPL01023185    OQR68861.1    MWRG01011212    PRD26074.1    KQ766578    OAD53689.1    NEVH01005904    PNF38186.1    GFPF01007821    MAA18967.1    GEDV01004601    JAP83956.1    CH963851    EDW75333.2    GFAC01002609    JAT96579.1    GFWV01005742    MAA30472.1    AB112548    BAE93513.1   
Pfam
PF15975   Flot        + More
PF01145   Band_7
PF00732   GMC_oxred_N
Interpro
IPR036013   Band_7/SPFH_dom_sf        + More
IPR027705   Flotillin_fam       
IPR031905   Flotillin_C       
IPR001107   Band_7       
IPR000014   PAS       
IPR000172   GMC_OxRdtase_N       
SUPFAM
SSF117892   SSF117892       
PDB
1WIN     E-value=1.32062e-51,     Score=513

Ontologies

Topology

Subcellular location
Membrane   In neuronal cells, associated with GPI-anchored cell-adhesion molecules.   With evidence from 1 publications.
Length:
436
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.11682
Exp number, first 60 AAs:
0.11458
Total prob of N-in:
0.00806
outside
1  -  436
 
 

Population Genetic Test Statistics

Pi
256.365727
Theta
173.938576
Tajima's D
2.038298
CLR
0.293512
CSRT
0.888455577221139
Interpretation
Uncertain
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